Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0758
         (670 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g49670.1 68418.m06150 hypothetical protein                          29   2.1  
At4g37150.1 68417.m05260 esterase, putative similar to ethylene-...    29   2.8  
At5g40290.1 68418.m04887 metal-dependent phosphohydrolase HD dom...    29   3.7  
At5g10520.1 68418.m01218 protein kinase family protein contains ...    28   6.5  
At3g19400.2 68416.m02460 cysteine proteinase, putative non-conse...    28   6.5  
At3g19400.1 68416.m02461 cysteine proteinase, putative non-conse...    28   6.5  

>At5g49670.1 68418.m06150 hypothetical protein 
          Length = 1184

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 214 EASIKFNLSFGINIGSGTL*SAFDLRVCSCLIGSSSKL 101
           EA ++    F  N+G G L   F L  C C I  SS++
Sbjct: 840 EAEVQIQSIFSENVGIGVLLEGFMLGFCGCRIVKSSRV 877


>At4g37150.1 68417.m05260 esterase, putative similar to
           ethylene-induced esterase [Citrus sinensis] GI:14279437,
           polyneuridine aldehyde esterase [Rauvolfia serpentina]
           GI:6651393; contains Pfam profile PF00561: hydrolase,
           alpha/beta fold family
          Length = 256

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/50 (24%), Positives = 30/50 (60%)
 Frame = +3

Query: 9   KRESTEDLAKINKVFNKCGEVKPKKIEWPAFNFDDDPIKQLQTLKSNADY 158
           K  + +    I++V+  CGE K  ++++  +  ++ P+K++  +K +AD+
Sbjct: 186 KSLTAQGYGSISRVYIVCGEDKGIRVDFQRWMIENSPVKEVMEIK-DADH 234


>At5g40290.1 68418.m04887 metal-dependent phosphohydrolase HD
           domain-containing protein similar to SP|Q60710
           Interferon-gamma inducible protein MG11 {Mus musculus};
           contains Pfam profile PF01966: HD domain
          Length = 448

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
 Frame = +3

Query: 129 LQTLKSNADYNVPDPMLIPKDKLNLILASPGKE-IMNLLSSRPEL--QLPEAF 278
           L+ +    DYN  +  +IP+D+++ +L +  +E I+ + + +PEL   + EAF
Sbjct: 380 LECINFYKDYNSAEKFVIPEDRVSHLLPTTYQEMIVRVYAKKPELVEAVSEAF 432


>At5g10520.1 68418.m01218 protein kinase family protein contains
           protein kinase domain, INTERPRO:IPR000719
          Length = 467

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = -1

Query: 349 SKIVSNCDNDMTSTSGSCSTAGKANASGSCNSGLELNKFIISLPGEASIKFNL 191
           S   S+C +D  S+S S   +       S + GL+ NK I S+  ++  +F++
Sbjct: 46  SSSCSSCSSDDKSSSTSSPFSNTTKTVSSSHHGLQWNKMIESIKKKSMRRFSV 98


>At3g19400.2 68416.m02460 cysteine proteinase, putative
           non-consensus AT acceptor site at exon 3; contains
           similarity to cysteine protease CYP1 GI:2828252, TDI-65
           GI:5726641 from [Lycopersicon esculentum]
          Length = 290

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 3   RIKRESTEDLAKINKVFNKCGEVKPKKIEWPA 98
           R K E T+D  K  +   K G+V P +++W A
Sbjct: 107 RKKMERTKDSVKTERYLYKEGDVLPDEVDWRA 138


>At3g19400.1 68416.m02461 cysteine proteinase, putative
           non-consensus AT acceptor site at exon 3; contains
           similarity to cysteine protease CYP1 GI:2828252, TDI-65
           GI:5726641 from [Lycopersicon esculentum]
          Length = 362

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 3   RIKRESTEDLAKINKVFNKCGEVKPKKIEWPA 98
           R K E T+D  K  +   K G+V P +++W A
Sbjct: 107 RKKMERTKDSVKTERYLYKEGDVLPDEVDWRA 138


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,891,290
Number of Sequences: 28952
Number of extensions: 249225
Number of successful extensions: 661
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)