Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0756
         (695 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q24262 Cluster: Blastopia polyprotein; n=2; Drosophila ...    43   0.008
UniRef50_Q4Y758 Cluster: Putative uncharacterized protein; n=1; ...    38   0.24 
UniRef50_UPI0000F31553 Cluster: UPI0000F31553 related cluster; n...    33   6.7  

>UniRef50_Q24262 Cluster: Blastopia polyprotein; n=2; Drosophila
            melanogaster|Rep: Blastopia polyprotein - Drosophila
            melanogaster (Fruit fly)
          Length = 1333

 Score = 42.7 bits (96), Expect = 0.008
 Identities = 21/38 (55%), Positives = 25/38 (65%)
 Frame = -1

Query: 695  PYRIVKVKRKNRSNVEKADAQVEGPNKTTTSADFMKKW 582
            PY +  VK   R +V+KA A VEGPN T+TS D MK W
Sbjct: 1274 PYEVTGVKDNGRYDVKKA-ANVEGPNVTSTSCDNMKLW 1310


>UniRef50_Q4Y758 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 163

 Score = 37.9 bits (84), Expect = 0.24
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = -1

Query: 494 SYSSIMLHLLAYDVLISFYHKMSFVFFLS*FCCNMFSL*SYDVNVIVVNCF 342
           S+  + L + AY+ +  FY K SFV   + F C  FS+     ++++ +CF
Sbjct: 19  SFYILYLFMYAYETICIFYKKTSFVLICATFICTYFSVAFVSYSLLIFSCF 69


>UniRef50_UPI0000F31553 Cluster: UPI0000F31553 related cluster; n=1;
           Bos taurus|Rep: UPI0000F31553 UniRef100 entry - Bos
           Taurus
          Length = 194

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +1

Query: 115 HPSVILSSHTSSPSILDIPLRSQTST--CIHHIMRSIKHHSHIRPSC 249
           H   +L +HTSSPS +  PL + T T  C H+ +  + HH+H+   C
Sbjct: 137 HSPCLLHTHTSSPS-MHTPLYTHTHTHQCTHNPL--VYHHTHLFHHC 180


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 492,020,319
Number of Sequences: 1657284
Number of extensions: 8362327
Number of successful extensions: 19538
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19534
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)