Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0754
         (564 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    25   0.45 
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    25   0.45 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    23   1.4  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   2.4  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   2.4  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   2.4  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   3.2  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   4.2  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   4.2  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    22   4.2  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   5.5  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   5.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.6  

>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 285 PAQLVYFHETLASHHYRGSMSSLQSGASGFSCLSGKST 398
           PA  +Y + + A HH++ + ++  + ASG    S  ST
Sbjct: 56  PAARMYPYVSAAHHHHQAAAAAFGAAASGSMVPSFSST 93


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 25.0 bits (52), Expect = 0.45
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 285 PAQLVYFHETLASHHYRGSMSSLQSGASGFSCLSGKST 398
           PA  +Y + + A HH++ + ++  + ASG    S  ST
Sbjct: 56  PAARMYPYVSAAHHHHQAAAAAFGAAASGSMVPSFSST 93


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 241 PLQRITCEPCMLSPSWHSR 185
           P+  +T E C L+ SW+S+
Sbjct: 211 PVNGVTSEKCNLTFSWYSK 229


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 23/73 (31%), Positives = 26/73 (35%)
 Frame = +3

Query: 12  VLRHDIAFTVFRSEHELHNPVDEVNSALCVGGGADEGRSVLEQKGWREGEHYHRVEPTLL 191
           +LRH          H LH    E    L V  G   G S        E +H HR +   L
Sbjct: 115 LLRHHEEVADGHQHHFLH----ENKYQLEVDSGYHLGASSTPTNSCMEYQHLHRYKEEAL 170

Query: 192 CHDGESIQGSHVM 230
             DG   Q  HVM
Sbjct: 171 QGDGRMRQ--HVM 181


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 23/73 (31%), Positives = 26/73 (35%)
 Frame = +3

Query: 12  VLRHDIAFTVFRSEHELHNPVDEVNSALCVGGGADEGRSVLEQKGWREGEHYHRVEPTLL 191
           +LRH          H LH    E    L V  G   G S        E +H HR +   L
Sbjct: 115 LLRHHEEVADGHQHHFLH----ENKYQLEVDSGYHLGASSTPTNSCMEYQHLHRYKEEAL 170

Query: 192 CHDGESIQGSHVM 230
             DG   Q  HVM
Sbjct: 171 QGDGRMRQ--HVM 181


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 23/73 (31%), Positives = 26/73 (35%)
 Frame = +3

Query: 12  VLRHDIAFTVFRSEHELHNPVDEVNSALCVGGGADEGRSVLEQKGWREGEHYHRVEPTLL 191
           +LRH          H LH    E    L V  G   G S        E +H HR +   L
Sbjct: 115 LLRHHEEVADGHQHHFLH----ENKYQLEVDSGYHLGASSTPTNSCMEYQHLHRYKEEAL 170

Query: 192 CHDGESIQGSHVM 230
             DG   Q  HVM
Sbjct: 171 QGDGRMRQ--HVM 181


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 448 GARGGGGSHHRDGQELPVDLPLRHENPLAP 359
           GAR  GG H  + Q+ P +L  +  +   P
Sbjct: 14  GARSPGGDHSENMQDEPENLSNKSNSITVP 43


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 162 HYHRVEPTLLCHDGESIQ 215
           +YH + PTLL  D E I+
Sbjct: 30  YYHFMTPTLLLRDVELIK 47


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +3

Query: 297 VYFHETLASHHYRGSMSSLQSGASGFSCLSGKST 398
           +Y + + A HH++ + ++  + ASG    S  ST
Sbjct: 1   MYPYVSAAHHHHQAAAAAFGAAASGSMVPSFSST 34


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +3

Query: 297 VYFHETLASHHYRGSMSSLQSGASGFSCLSGKST 398
           +Y + + A HH++ + ++  + ASG    S  ST
Sbjct: 1   MYPYVSAAHHHHQAAAAAFGAAASGSMVPSFSST 34


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +3

Query: 72  VDEVNSALCVGGGADEGRSVLEQKGWREGEH 164
           +DE+N  + +     + + +L   GW EG +
Sbjct: 77  LDEMNHLMSLREKNPDLKIILSMGGWNEGSY 107


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +3

Query: 12  VLRHDIAFTVFRSEHELHNPVDEVNSALCVGGGAD 116
           + R D    V +SE +LH+P    ++ L  G G++
Sbjct: 19  IYREDDVLLV-KSEPQLHSPCATGSNGLPAGAGSN 52


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = -3

Query: 145 PFCSSTERPSSAPPPTH 95
           PF      P S PPP H
Sbjct: 125 PFFCHNGDPLSQPPPAH 141


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = -3

Query: 145 PFCSSTERPSSAPPPTH 95
           PF      P S PPP H
Sbjct: 17  PFFCHNGDPLSQPPPAH 33


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 148 QPFCSSTERPSSAPPPT 98
           +P  S+T RP  A PP+
Sbjct: 401 EPTISTTPRPEWARPPS 417


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,854
Number of Sequences: 336
Number of extensions: 1678
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)