Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0754
(564 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z19158-4|CAJ76964.1| 719|Caenorhabditis elegans Hypothetical pr... 55 4e-08
AF016448-10|ABR92607.1| 849|Caenorhabditis elegans Smek (dictyo... 32 0.25
AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek (dictyos... 32 0.25
Z28377-1|CAA82226.1| 264|Caenorhabditis elegans PES-1A protein ... 30 1.0
Z28376-1|CAA82225.1| 228|Caenorhabditis elegans PES-1B protein ... 30 1.0
Z28375-1|CAA82224.1| 264|Caenorhabditis elegans PES-1 protein. 30 1.0
U64609-3|AAB04600.1| 264|Caenorhabditis elegans Patterned expre... 30 1.0
Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein. 29 3.1
Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF039046-14|AAB94214.1| 388|Caenorhabditis elegans Prion-like-(... 28 4.0
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 28 4.0
Z46812-2|CAA86844.1| 1027|Caenorhabditis elegans Hypothetical pr... 28 5.3
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 28 5.3
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 28 5.3
AL023811-1|CAA19422.2| 947|Caenorhabditis elegans Hypothetical ... 28 5.3
AF043693-11|AAB97541.2| 213|Caenorhabditis elegans Hypothetical... 27 7.0
Z81567-3|CAB04587.1| 301|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z81467-3|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical pr... 27 9.3
Z81467-2|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical pr... 27 9.3
AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein. 27 9.3
AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein. 27 9.3
AC006709-1|AAF60432.2| 256|Caenorhabditis elegans Hypothetical ... 27 9.3
>Z19158-4|CAJ76964.1| 719|Caenorhabditis elegans Hypothetical protein
T23G5.2a protein.
Length = 719
Score = 54.8 bits (126), Expect = 4e-08
Identities = 44/155 (28%), Positives = 81/155 (52%), Gaps = 27/155 (17%)
Frame = +3
Query: 3 DFDVLRHDIAFTVFRSEHELH---------------NPVDEVNSALCVGGGADEGRSVLE 137
DFDVL++D F+++ S ++ NPV+ V++A +GG + + +
Sbjct: 554 DFDVLKNDCEFSLYFSTEKIEQPAVRDGAQSPTTILNPVEMVSAA--IGGASHQHPDLQC 611
Query: 138 QKGWREGEHYHRVEP-TLLCHDGESIQGSHVMRCSGAYVLQWR--------CELLD--AP 284
+ G R+E ++ +G+S+QGSH +G Y++QWR D +
Sbjct: 612 APELKIGTPQLRLEEKAVVFQEGDSMQGSHYCSRAGTYIMQWRVPETAAGHSSTFDFGSH 671
Query: 285 PAQLVYFHETLASHHYRGSMSSLQS-GASGFSCLS 386
+L+Y++E L S ++RGS++SL+S +S FS ++
Sbjct: 672 KCRLIYYYEILNSENFRGSVASLESCRSSSFSSIA 706
>AF016448-10|ABR92607.1| 849|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform b protein.
Length = 849
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = -3
Query: 160 SPSRQPFCSSTERPSSAPPPTHNAELTSS 74
SPSR P +S+ R SS+P P+ + E+TSS
Sbjct: 694 SPSRTPSPASSPRASSSPGPSRDDEVTSS 722
>AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform a protein.
Length = 1085
Score = 32.3 bits (70), Expect = 0.25
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = -3
Query: 160 SPSRQPFCSSTERPSSAPPPTHNAELTSS 74
SPSR P +S+ R SS+P P+ + E+TSS
Sbjct: 930 SPSRTPSPASSPRASSSPGPSRDDEVTSS 958
>Z28377-1|CAA82226.1| 264|Caenorhabditis elegans PES-1A protein
protein.
Length = 264
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -3
Query: 238 LQRITCEPCMLSP--SWHSRVGSTRW*CSPSRQPFCSSTERPSSAPPPTHNA 89
L T C +SP S+H+R S S P SSTE P+ P ++NA
Sbjct: 49 LDSSTSSSCSVSPASSFHTRSESVGQQQSGRNSPVSSSTESPTKRPKYSYNA 100
>Z28376-1|CAA82225.1| 228|Caenorhabditis elegans PES-1B protein
protein.
Length = 228
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -3
Query: 238 LQRITCEPCMLSP--SWHSRVGSTRW*CSPSRQPFCSSTERPSSAPPPTHNA 89
L T C +SP S+H+R S S P SSTE P+ P ++NA
Sbjct: 13 LDSSTSSSCSVSPASSFHTRSESVGQQQSGRNSPVSSSTESPTKRPKYSYNA 64
>Z28375-1|CAA82224.1| 264|Caenorhabditis elegans PES-1 protein.
Length = 264
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -3
Query: 238 LQRITCEPCMLSP--SWHSRVGSTRW*CSPSRQPFCSSTERPSSAPPPTHNA 89
L T C +SP S+H+R S S P SSTE P+ P ++NA
Sbjct: 49 LDSSTSSSCSVSPASSFHTRSESVGQQQSGRNSPVSSSTESPTKRPKYSYNA 100
>U64609-3|AAB04600.1| 264|Caenorhabditis elegans Patterned
expression site protein 1 protein.
Length = 264
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -3
Query: 238 LQRITCEPCMLSP--SWHSRVGSTRW*CSPSRQPFCSSTERPSSAPPPTHNA 89
L T C +SP S+H+R S S P SSTE P+ P ++NA
Sbjct: 49 LDSSTSSSCSVSPASSFHTRSESVGQQQSGRNSPVSSSTESPTKRPKYSYNA 100
>Z99266-1|CAB16464.1| 292|Caenorhabditis elegans F15C11.2 protein.
Length = 292
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 160 SPSRQPFCSSTERPSSAPPPTHNAELTSSTGLWSSCSLLNTVNAM 26
+P+ SS PSS P PT+N + G+ S +LN +AM
Sbjct: 92 TPTASSAPSSNPTPSSQPNPTNN-PFAAMGGMGSPADILNNPDAM 135
>Z98262-3|CAD44156.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 160 SPSRQPFCSSTERPSSAPPPTHNAELTSSTGLWSSCSLLNTVNAM 26
+P+ SS PSS P PT+N + G+ S +LN +AM
Sbjct: 92 TPTASSAPSSNPTPSSQPNPTNN-PFAAMGGMGSPADILNNPDAM 135
>Z98262-1|CAB10932.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 160 SPSRQPFCSSTERPSSAPPPTHNAELTSSTGLWSSCSLLNTVNAM 26
+P+ SS PSS P PT+N + G+ S +LN +AM
Sbjct: 92 TPTASSAPSSNPTPSSQPNPTNN-PFAAMGGMGSPADILNNPDAM 135
>Z71260-4|CAD44116.1| 454|Caenorhabditis elegans Hypothetical
protein F15C11.2c protein.
Length = 454
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 160 SPSRQPFCSSTERPSSAPPPTHNAELTSSTGLWSSCSLLNTVNAM 26
+P+ SS PSS P PT+N + G+ S +LN +AM
Sbjct: 92 TPTASSAPSSNPTPSSQPNPTNN-PFAAMGGMGSPADILNNPDAM 135
>Z71260-2|CAA95799.1| 502|Caenorhabditis elegans Hypothetical
protein F15C11.2a protein.
Length = 502
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 160 SPSRQPFCSSTERPSSAPPPTHNAELTSSTGLWSSCSLLNTVNAM 26
+P+ SS PSS P PT+N + G+ S +LN +AM
Sbjct: 92 TPTASSAPSSNPTPSSQPNPTNN-PFAAMGGMGSPADILNNPDAM 135
>AF039046-14|AAB94214.1| 388|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 54
protein.
Length = 388
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/69 (27%), Positives = 35/69 (50%)
Frame = -3
Query: 211 MLSPSWHSRVGSTRW*CSPSRQPFCSSTERPSSAPPPTHNAELTSSTGLWSSCSLLNTVN 32
M +P ++ GS C+P+ QP C ++ S P P +N S++ SS +++ V
Sbjct: 247 MYNPYNNNNQGSGSANCAPACQPACDNS-CTSQTPAPMYNPYDASTSAPASSQAVIQIVL 305
Query: 31 AMSCLRTSK 5
S ++S+
Sbjct: 306 QSSVAQSSQ 314
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -3
Query: 163 CSPSRQPFCSSTERPSSAPPPTHNAELTSSTGLWSSCSLLNTV 35
C+P QP C S ++ + A PP ++ ++ + +SCS V
Sbjct: 33 CAPRVQPSC-SCQQTTYAQPPQYSCSCQNTAPVQTSCSCAQPV 74
>Z46812-2|CAA86844.1| 1027|Caenorhabditis elegans Hypothetical
protein ZK675.2 protein.
Length = 1027
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 454 EWGARGGGGSHHRDGQELPVDLPLRHENPLAP 359
E+ R GG S + G LPV++P+++ L P
Sbjct: 143 EYPDREGGNSMDKQGTMLPVEVPIQNNIKLIP 174
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 475 GGPPASEEWGARGGGGSHHRDG 410
GG S G GGGG HH G
Sbjct: 180 GGGGGSHHHGGGGGGGGHHHHG 201
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -3
Query: 163 CSPSRQPFCSSTERPSSAPPPTHNAELTSSTGLWSSCSLLNTVNAMSCL 17
C+P QP CS + P + P T + ++ + +SCS V + L
Sbjct: 31 CAPKVQPSCSCQQTPYTQPQET-SCSCQNTAPVQTSCSCAQPVQQQTYL 78
>AL023811-1|CAA19422.2| 947|Caenorhabditis elegans Hypothetical
protein C51F7.1 protein.
Length = 947
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 148 QPFCSSTERPSSAPPPTHNAELTSSTG 68
QP + + SS+PPP LT+STG
Sbjct: 720 QPIFAVGPKTSSSPPPQSQPSLTASTG 746
>AF043693-11|AAB97541.2| 213|Caenorhabditis elegans Hypothetical
protein C34B2.9 protein.
Length = 213
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 154 SRQPFCSSTERPSSAPPPTHNAELT 80
SR+P SS PSS+P P H + T
Sbjct: 106 SRRPIISSNNPPSSSPVPLHVSSST 130
>Z81567-3|CAB04587.1| 301|Caenorhabditis elegans Hypothetical
protein K08C9.4 protein.
Length = 301
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Frame = -3
Query: 490 CPVS*GGPPASE----EWGARGGGGSHHRDGQELPVDLPLRHE 374
CP GPP + GA G G + DG P+D +H+
Sbjct: 91 CPAGPAGPPGEPGQPGDDGAPGKAGDNGHDGIPSPIDAYAQHD 133
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = -3
Query: 109 PPPTHNAELTSSTGLW-SSCSLLNT 38
PPPT+ S G W +C +LNT
Sbjct: 152 PPPTYTCNRCSQPGHWYKNCPMLNT 176
>Z81467-3|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical
protein C12C8.3b protein.
Length = 1143
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +3
Query: 45 RSEHELHNPVDEVNSALCVGGGADEGRSVLEQKGWREGEHYHR 173
R + E+ ++ + L +GG + EG S+ +G H+H+
Sbjct: 21 RLQTEIDVDANDSGNELSMGGSSSEGDSMSHHRGEHSPNHHHQ 63
>Z81467-2|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical
protein C12C8.3a protein.
Length = 1147
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +3
Query: 45 RSEHELHNPVDEVNSALCVGGGADEGRSVLEQKGWREGEHYHR 173
R + E+ ++ + L +GG + EG S+ +G H+H+
Sbjct: 21 RLQTEIDVDANDSGNELSMGGSSSEGDSMSHHRGEHSPNHHHQ 63
>AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein.
Length = 1147
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +3
Query: 45 RSEHELHNPVDEVNSALCVGGGADEGRSVLEQKGWREGEHYHR 173
R + E+ ++ + L +GG + EG S+ +G H+H+
Sbjct: 21 RLQTEIDVDANDSGNELSMGGSSSEGDSMSHHRGEHSPNHHHQ 63
>AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein.
Length = 1143
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +3
Query: 45 RSEHELHNPVDEVNSALCVGGGADEGRSVLEQKGWREGEHYHR 173
R + E+ ++ + L +GG + EG S+ +G H+H+
Sbjct: 21 RLQTEIDVDANDSGNELSMGGSSSEGDSMSHHRGEHSPNHHHQ 63
>AC006709-1|AAF60432.2| 256|Caenorhabditis elegans Hypothetical
protein Y119C1A.1 protein.
Length = 256
Score = 27.1 bits (57), Expect = 9.3
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = -3
Query: 121 PSSAPPPTHNAELTSSTGLW--SSCSLLNTVNAMSC 20
P PPP + +STG W CS N N+ C
Sbjct: 191 PPPRPPPPRSISQENSTGPWICDRCSRENNSNSYRC 226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,999,726
Number of Sequences: 27780
Number of extensions: 167732
Number of successful extensions: 856
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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