Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0752
         (755 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    45   0.002
UniRef50_A2TF13 Cluster: 11-beta short-chain dehydrogenase reduc...    34   3.3  
UniRef50_Q6IE02 Cluster: Mod(Mdg4)-heS00531; n=1; Bombyx mori|Re...    33   5.8  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = +1

Query: 352 YLLP*WVDELTAHLVLSGYWSP 417
           +LL  WVDELTAHLVLSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_A2TF13 Cluster: 11-beta short-chain dehydrogenase
           reductase; n=3; Brassicaceae|Rep: 11-beta short-chain
           dehydrogenase reductase - Brassica napus (Rape)
          Length = 238

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -2

Query: 721 VYDQHFKCDTYVTYYDCPHPTSGKGKITFIKETEIK 614
           + D +F   TY+TYY  PH    KGKI  I     K
Sbjct: 82  IMDTNFWGSTYITYYAIPHLRKSKGKIVVIASAAAK 117


>UniRef50_Q6IE02 Cluster: Mod(Mdg4)-heS00531; n=1; Bombyx mori|Rep:
           Mod(Mdg4)-heS00531 - Bombyx mori (Silk moth)
          Length = 344

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +1

Query: 16  GSKTWWVCSQRISSRCPAAMITFENKPIKINSKHTH 123
           G KT W C++  +  C ++++TFE+  +K+   H H
Sbjct: 308 GEKTSWRCAKWRNGFCRSSIVTFEDIIVKLGKPHNH 343


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 743,689,128
Number of Sequences: 1657284
Number of extensions: 14304275
Number of successful extensions: 26913
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26911
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)