Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0752
         (755 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    28   0.070
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    28   0.070
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    28   0.070
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    28   0.070
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    25   0.65 
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   2.6  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   6.1  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   6.1  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.0  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   8.0  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 28.3 bits (60), Expect = 0.070
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -2

Query: 703  KCDTYVTYYDCPHPTSGKGKITFIKETEIKFW 608
            K D  V  Y    P   KG++ F+  TEI FW
Sbjct: 1205 KRDDLVNPYWIEDPDVRKGEVEFLSSTEILFW 1236


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 28.3 bits (60), Expect = 0.070
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -2

Query: 703  KCDTYVTYYDCPHPTSGKGKITFIKETEIKFW 608
            K D  V  Y    P   KG++ F+  TEI FW
Sbjct: 1205 KRDDLVNPYWIEDPDVRKGEVEFLSSTEILFW 1236


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 28.3 bits (60), Expect = 0.070
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -2

Query: 703  KCDTYVTYYDCPHPTSGKGKITFIKETEIKFW 608
            K D  V  Y    P   KG++ F+  TEI FW
Sbjct: 1205 KRDDLVNPYWIEDPDVRKGEVEFLSSTEILFW 1236


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 28.3 bits (60), Expect = 0.070
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -2

Query: 703  KCDTYVTYYDCPHPTSGKGKITFIKETEIKFW 608
            K D  V  Y    P   KG++ F+  TEI FW
Sbjct: 1205 KRDDLVNPYWIEDPDVRKGEVEFLSSTEILFW 1236


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +2

Query: 458 QVLKISCIVTTAAPTFKPKRITASRQK*AGRWYLPV 565
           Q LKISC+ TT  P    +   AS  +  G +YLP+
Sbjct: 27  QPLKISCLKTTPPPEEDNRGCAASVGE--GSFYLPM 60


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -2

Query: 724 NVYDQHFKCDTYVTYYDCPHPTSGKGKITFIKETEIK 614
           ++Y Q F  D YV YY    PT     +  IK+  +K
Sbjct: 17  DIYRQ-FPTDRYVGYYHFMTPTLLLRDVELIKQIGVK 52


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 18 FENLVGLQSENIIEVSSGYDHF 83
          FEN   LQS N ++  + Y+++
Sbjct: 15 FENQAVLQSYNFLQEKTTYEYY 36


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 18 FENLVGLQSENIIEVSSGYDHF 83
          FEN   LQS N ++  + Y+++
Sbjct: 6  FENQAVLQSYNFLQEKTTYEYY 27


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 402 WLLEPIDIHNVNAPPTLRYK 461
           WL  P  + N   P +LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 600 TRHQNFISVSLINVILPFPLVG 665
           T +QN   +S++N   P+P +G
Sbjct: 372 THYQNPEYISVVNPESPYPQIG 393


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,905
Number of Sequences: 336
Number of extensions: 3980
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)