Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0750
(661 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 39 7e-04
SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces ... 38 0.002
SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting pr... 33 0.036
SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyc... 31 0.15
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 30 0.26
SPAC57A7.13 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 30 0.34
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 29 0.45
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 29 0.45
SPBC3H7.14 |mug176||BRCT domain protein|Schizosaccharomyces pomb... 29 0.59
SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces pombe... 29 0.78
SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 29 0.78
SPBC119.17 ||SPBC577.01|metallopeptidase|Schizosaccharomyces pom... 29 0.78
SPBC216.06c |swi1||replication fork protection complex subunit S... 29 0.78
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 28 1.0
SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1 |Schizosacch... 28 1.0
SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate reductase/... 28 1.0
SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyc... 28 1.0
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 28 1.0
SPCC10H11.01 |prp11||ATP-dependent RNA helicase Prp11|Schizosacc... 28 1.4
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 1.4
SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex ... 28 1.4
SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit S5|S... 27 1.8
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 27 1.8
SPBC902.02c |ctf18|chl12|DNA replication factor C complex subuni... 27 2.4
SPAC1D4.03c |aut12||autophagy associated protein Aut12|Schizosac... 27 2.4
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 2.4
SPAC5D6.09c |mug86||acetate transporter |Schizosaccharomyces pom... 27 3.2
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 27 3.2
SPBC106.20 |exo70|SPBC582.02|exocyst complex subunit Exo70 |Schi... 27 3.2
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 27 3.2
SPAC19E9.02 |fin1||serine/threonine protein kinase Fin1|Schizosa... 27 3.2
SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces... 26 4.2
SPBC1105.02c |lys4||homocitrate synthase |Schizosaccharomyces po... 26 4.2
SPBC1347.04 |tim54||TIM22 inner membrane protein import complex ... 26 4.2
SPCC1259.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 26 4.2
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 26 5.5
SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pomb... 26 5.5
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 26 5.5
SPAC19G12.02c |pms1||MutL family mismatch-repair protein Pms1|Sc... 26 5.5
SPAC4G9.02 |||ribonuclease H2 complex subunit|Schizosaccharomyce... 25 7.3
SPAC1751.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 7.3
SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom... 25 7.3
SPCC1682.08c |||RNA-binding protein Mcp2|Schizosaccharomyces pom... 25 7.3
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 25 7.3
SPBC887.17 |||uracil permease |Schizosaccharomyces pombe|chr 2||... 25 7.3
SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 25 7.3
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 25 7.3
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 7.3
SPCC1682.11c |||DUF580 family protein|Schizosaccharomyces pombe|... 25 9.7
SPCC31H12.06 |mug111||sequence orphan|Schizosaccharomyces pombe|... 25 9.7
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 38.7 bits (86), Expect = 7e-04
Identities = 42/191 (21%), Positives = 84/191 (43%), Gaps = 9/191 (4%)
Frame = +2
Query: 44 AKRLET-GDKGYSDKYVKRKEYTKKHRHTTPMKKHNNTNYSHSI---ISKDDNTSPVDIS 211
A+ LET ++ K K T + + +T ++ ++ S +T+ +
Sbjct: 343 ARTLETVSEEQMGSSNAKSKVLTSEPKDSTSVEAEKTETDEPAVGKGASDVSDTAEISEK 402
Query: 212 TSSNNQSSN-RIDTKTKLKTIDMFMDQPKKSNLHQ--AHRNTSIAPSKNGNPIGKHSPNK 382
T + N S ++ K+ + D+ K++LH+ ++T I G
Sbjct: 403 TEAKNADSEANLEEKSDVGEEKESKDENNKASLHKDVEEKDTKITNEDTGKT-------- 454
Query: 383 QTGVSHKENSIKKLISKETQTINKSTFNTKSSQTERKKFNTKSIQTDPISV--QKETTKS 556
+T V KE + K+ +T +K T K +TE K+ + K+ +TD I V ++E T S
Sbjct: 455 ETDVKAKETDSIEANDKDEKTDSKET-EDKVEETESKEADVKAKETDSIEVDDKEEKTDS 513
Query: 557 TDVFERMKEID 589
+ +++++ D
Sbjct: 514 KETADKVEQTD 524
>SPBC1709.11c |png2||ING family homolog Png2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 305
Score = 37.5 bits (83), Expect = 0.002
Identities = 24/133 (18%), Positives = 55/133 (41%)
Frame = +2
Query: 5 VPNSARGKHPSKDAKRLETGDKGYSDKYVKRKEYTKKHRHTTPMKKHNNTNYSHSIISKD 184
+P R +P D + L + + +R+ T++H++ +++++ S S + +
Sbjct: 115 IPQQLRLGYP--DDRALMNYHSTVTPQTSERRRETRRHQNNQHSQQYSSQERSSSYNNFE 172
Query: 185 DNTSPVDISTSSNNQSSNRIDTKTKLKTIDMFMDQPKKSNLHQAHRNTSIAPSKNGNPIG 364
D +SP + + N + K+ + P+ + R+ S NG P+
Sbjct: 173 DASSPQSSYHTPTKRRKNAVPRKSSSPPLSSTKHAPQSTERRPVRRSESRLKQTNGEPLV 232
Query: 365 KHSPNKQTGVSHK 403
KH + +S +
Sbjct: 233 KHDTLDSSDISRE 245
>SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting
protein homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 455
Score = 33.1 bits (72), Expect = 0.036
Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 4/127 (3%)
Frame = +2
Query: 11 NSARGKHPSKDAKRLETGDKGYSDKYVKRKEYTKKHRHTTPMKKHNNTNYSHSIISKDDN 190
N+A HPS + KGY ++ K ++ + + H ++ + +S
Sbjct: 90 NTATSSHPSFYIANNK--QKGYDEEMYKVNPASRNKSQSNNISSHEKSSKTTKNVSPGVM 147
Query: 191 TS---PVDISTSSNNQSSNRIDTKTKLKTIDMFMDQPKKS-NLHQAHRNTSIAPSKNGNP 358
TS P S NN SSNRI+ L I+ + Q + S N+++A R + +P
Sbjct: 148 TSDLIPEKKSVKHNNSSSNRIE---GLADIEKAIRQIEISQNINKAERRVCNCQGRK-HP 203
Query: 359 IGKHSPN 379
+ + +PN
Sbjct: 204 LNEAAPN 210
>SPAC18G6.10 |||chromosome segregation protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 688
Score = 31.1 bits (67), Expect = 0.15
Identities = 22/108 (20%), Positives = 48/108 (44%)
Frame = +2
Query: 80 DKYVKRKEYTKKHRHTTPMKKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSNRIDTKTK 259
D+ K K + + ++K N+N S + S +D +P + SS ++S+ + +T+
Sbjct: 44 DRIRKNKLSSGPQHLLSHLQKEENSNTSKAS-SSEDEIAPKYLYPSSPSKSTKKPHNETE 102
Query: 260 LKTIDMFMDQPKKSNLHQAHRNTSIAPSKNGNPIGKHSPNKQTGVSHK 403
F+D+P + ++ + + SPN +T ++ K
Sbjct: 103 PLLSPQFIDKPSNIETPVKIESPHVSQNNTFQSYSELSPNVETSLTMK 150
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 30.3 bits (65), Expect = 0.26
Identities = 29/131 (22%), Positives = 53/131 (40%)
Frame = +2
Query: 137 KKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSNRIDTKTKLKTIDMFMDQPKKSNLHQA 316
K H+N+N + + D N S S+N+ S +D MD+ + +
Sbjct: 97 KHHDNSNKESTNLD-DLNMSEEPKHHDSSNKESTNLDNSN--------MDESENQKNFKI 147
Query: 317 HRNTSIAPSKNGNPIGKHSPNKQTGVSHKENSIKKLISKETQTINKSTFNTKSSQTERKK 496
+N P + H + I++ I + N+ ++T+S + E +
Sbjct: 148 EEPKPSGDFRNEGPKQCDDSKIEKPELHVNSKIEEPIHRIDSEHNEPEYHTES-KNEESE 206
Query: 497 FNTKSIQTDPI 529
NTKSI+ +PI
Sbjct: 207 HNTKSIREEPI 217
>SPAC57A7.13 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 565
Score = 29.9 bits (64), Expect = 0.34
Identities = 25/103 (24%), Positives = 42/103 (40%)
Frame = +2
Query: 119 RHTTPMKKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSNRIDTKTKLKTIDMFMDQPKK 298
+H T HNN +H ++S + T S + + + + + KK
Sbjct: 421 KHITQSIMHNNNLKNHELVSSAELLMHRVRQTESVDYRDRATERRIVPAASSDTIVEAKK 480
Query: 299 SNLHQAHRNTSIAPSKNGNPIGKHSPNKQTGVSHKENSIKKLI 427
S+ + +TS K N +G NK +G+ EN IK+ I
Sbjct: 481 SSQGSSFHSTSNVSMKMLNSMGW---NKGSGLGTNENGIKEAI 520
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 29.5 bits (63), Expect = 0.45
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +2
Query: 104 YTKKHRHTTPMKKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSN 238
Y K H T +KK N NY+ ++ K D + T S + S N
Sbjct: 622 YGKSHNEDTCIKKRRNLNYNENLSCKVDLDKKKMLETLSLSDSPN 666
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 29.5 bits (63), Expect = 0.45
Identities = 21/100 (21%), Positives = 41/100 (41%)
Frame = +2
Query: 134 MKKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSNRIDTKTKLKTIDMFMDQPKKSNLHQ 313
M+ + ++S+ ++ D P D + +Q N + K + +KS
Sbjct: 1 MEAEESESFSYPMLLPSDGLYPEDDDDADMDQDKNPEENVMNEKEDEDVDAVDEKSGEED 60
Query: 314 AHRNTSIAPSKNGNPIGKHSPNKQTGVSHKENSIKKLISK 433
+T ++N + S K+T + KEN ++KL K
Sbjct: 61 VEMDTMEDENENDEDTEQTSEKKETEETPKENPLEKLKQK 100
>SPBC3H7.14 |mug176||BRCT domain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 406
Score = 29.1 bits (62), Expect = 0.59
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Frame = +2
Query: 95 RKEYTKKH-RHTTPMKKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSNRID--TKTKLK 265
RK ++++ RH+ P + N+N S S ++ D + ++ S S N+I +KTK
Sbjct: 18 RKGHSRRQSRHSIPSDE-LNSNSSKS-LNNDRISRTIENSLQKETNSDNKIKKLSKTKSN 75
Query: 266 TIDMFMDQPKKSNLHQAHRNTSIAPSKNGNPIGK-HSPNK---QTGVSHK 403
+ ++ + I PSK P+ K +SPN+ QT ++ K
Sbjct: 76 PTNPKSEEDPSQICQSFDESNIITPSKYLFPLSKDYSPNEGLFQTDMNEK 125
>SPAC16A10.01 |||DUF1212 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 830
Score = 28.7 bits (61), Expect = 0.78
Identities = 19/88 (21%), Positives = 35/88 (39%)
Frame = +2
Query: 8 PNSARGKHPSKDAKRLETGDKGYSDKYVKRKEYTKKHRHTTPMKKHNNTNYSHSIISKDD 187
P S K K R++ G G + + + HR + + S S+ S D
Sbjct: 33 PGSLLKKKIRKTEFRIDNGLLGNTSPIINVESKIPFHRRANSTPEESRKRVSFSLTSNDG 92
Query: 188 NTSPVDISTSSNNQSSNRIDTKTKLKTI 271
S SSN++ S R ++++ ++
Sbjct: 93 AKSDRSSQKSSNSRKSIRSQSRSRSSSV 120
>SPAC4G8.03c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 780
Score = 28.7 bits (61), Expect = 0.78
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +2
Query: 353 NPIGKHSPNKQTGVSHKENSIKKLISKETQTINKSTFNTKS-SQTERKK-----FNTKSI 514
N + + +++T S IS+E N+S F++ S S TE K F+ +S
Sbjct: 8 NELNLNKKSQETNRKPSPLSSYTSISRELDYANQSPFSSNSFSPTELKARTSATFDVRSA 67
Query: 515 QTDPISVQKETTKSTDVFERM 577
T PI+ S D F+R+
Sbjct: 68 STSPINASDFHKYSHDPFQRL 88
>SPBC119.17 ||SPBC577.01|metallopeptidase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 992
Score = 28.7 bits (61), Expect = 0.78
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Frame = +2
Query: 308 HQAHRNT---SIAPSK--NGNPIGKHSPNKQTGVSHKENSIKKLISKETQTINKSTFNTK 472
HQ R T SI+PS N + + K+ + G++ ++ K + K + INK+ +NT
Sbjct: 619 HQIRRYTGGISISPSAVTNNSDVSKY----ELGIAISGYALDKNVGKLVELINKAFWNTN 674
Query: 473 SSQTER 490
S T++
Sbjct: 675 LSNTDK 680
>SPBC216.06c |swi1||replication fork protection complex subunit
Swi1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 971
Score = 28.7 bits (61), Expect = 0.78
Identities = 28/103 (27%), Positives = 40/103 (38%), Gaps = 3/103 (2%)
Frame = +2
Query: 32 PSKDAKRLETGDKGYSDKYVKRKEYTKKHRHTTPMKKHNNTNYSHSIISKDDNTSPVDIS 211
P A R E +K K K K HTT KK N+ + I+ DD+ S DI+
Sbjct: 868 PITFANRREALNKITDRKRKKMKTNETIIDHTTRKKKENHLRSAKYIVDSDDD-SETDIA 926
Query: 212 ---TSSNNQSSNRIDTKTKLKTIDMFMDQPKKSNLHQAHRNTS 331
+ + + N K ID + K + Q N+S
Sbjct: 927 FFQSEAALREKNAQKASALFKRIDDLEMEGKLQEIEQLSENSS 969
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1388
Score = 28.3 bits (60), Expect = 1.0
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = +2
Query: 299 SNLHQAHRNTSIAPSKNGNPIGKHSPNKQTGVSHKENSIKKLISKETQTINKSTFNTKSS 478
S L + H+N I S + GK P KQT +++ S K + K Q I +T +
Sbjct: 1196 SALREHHQNFGIKSSPAISTNGKTQPKKQT--ANRRQSGKPNV-KSAQKIESATRTPSPA 1252
Query: 479 QTE-RKKFNTKSIQTDPISVQKETTKSTDVFERMKE 583
+E RKK ++K + + S ++ +++ + K+
Sbjct: 1253 ISESRKKPSSKDTKIETPSREQSRSQTASPVKSEKD 1288
>SPAC22F3.08c |rok1||ATP-dependent RNA helicase Rok1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 481
Score = 28.3 bits (60), Expect = 1.0
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 26 KHPSKDAKRLETGDKGYSDKYVKRKEYTKKHRHTTPMKKHN 148
K P K KR+ T K ++KEY KK + +KKHN
Sbjct: 434 KSPPK-RKRITTRASYDRQKEQRKKEYIKKVKKEASIKKHN 473
>SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate
reductase/acetylglutamate kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 885
Score = 28.3 bits (60), Expect = 1.0
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 173 ISKDDNTSPVDISTSSNNQSSNRIDTKTKLKTIDMFMDQPKKSN 304
I + +T P S+++NN SS++I+ K T +F + KK N
Sbjct: 498 IIQTQSTKPPTASSTTNNPSSSQINQKRSYSTSSLF-SKNKKMN 540
>SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1428
Score = 28.3 bits (60), Expect = 1.0
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 206 ISTSSNNQSSNRIDTKTKLKTIDMFMDQPKKSNLHQAHRNTSIAP-SKNGNPIGKHSPNK 382
I++ +N S + + T +D+P +N + N+ + P K+ + KH+PNK
Sbjct: 198 INSEPSNSSFSYEVQPSNYTTFCRMLDEPLPAN-NPVQSNSRLVPLMKDFSNDIKHTPNK 256
Query: 383 QTGVSHK-ENSIKKLISK 433
+T S++ ++S+K SK
Sbjct: 257 ETQPSNQVDDSLKSKDSK 274
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 28.3 bits (60), Expect = 1.0
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 6/119 (5%)
Frame = +2
Query: 155 NYSHSIISKDDNTSPV-DISTSSNNQSSNRIDTKTKLKTIDMFMDQPKKSNLHQAHRNTS 331
N SHSI+ K +TSP+ I S ++ D++T + ++ QA S
Sbjct: 336 NRSHSILQKPTDTSPLHKIEPISADELVESDDSRTSALSNSQNPSDDVENQSDQALEVLS 395
Query: 332 IA-PSKNGNPIGKHSPNKQTGVSHK----ENSIKKLISKETQTINKSTFNTKSSQTERK 493
+ P K N + +K+T K EN + ++ E+ ++++ T K+ E K
Sbjct: 396 LTNPPKIDNASADTTLHKETNKIDKLYVSENKAESAVASES-SLSEGTLALKAPAPENK 453
>SPCC10H11.01 |prp11||ATP-dependent RNA helicase
Prp11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1014
Score = 27.9 bits (59), Expect = 1.4
Identities = 30/149 (20%), Positives = 58/149 (38%), Gaps = 2/149 (1%)
Frame = +2
Query: 68 KGYSDKYVKRKEYTKKHRHTTPMKKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSNRID 247
K D+Y+ R HRH + N T K D T+PV +++ + R
Sbjct: 89 KNIPDQYIGRSPRPTSHRHAEEKEVDNKT--------KSDETNPVLQGSATEIKPQPR-- 138
Query: 248 TKTKLKTIDMFMDQPKKSNLHQAHRNTSIAPSKNGNPIGKHSPNKQTGVSHKENSIKKLI 427
+++ + S + + + P K+ H N + V+ + + KL+
Sbjct: 139 -RSRFDRTERVGASLSVSEIQSENPRVDVIP-KDKAVENNHQRNAEKPVASDKITDAKLL 196
Query: 428 SK--ETQTINKSTFNTKSSQTERKKFNTK 508
++ + +S ++S+ E K NTK
Sbjct: 197 ARLERVRAWKESKAKQEASKKEEHKLNTK 225
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.9 bits (59), Expect = 1.4
Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 2/124 (1%)
Frame = +2
Query: 146 NNTNYSHSIISKDDNTSPVDISTSSNNQSSNRIDTKTKLKTIDMFMDQPKKSNLHQAHRN 325
++++ S SIIS ++S STSS SS+ + + + S+ +
Sbjct: 264 SSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSS 323
Query: 326 TSIAPSK--NGNPIGKHSPNKQTGVSHKENSIKKLISKETQTINKSTFNTKSSQTERKKF 499
+S++ S + +P S + S +S S + + S+ + SS T
Sbjct: 324 SSMSSSSSFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTL 383
Query: 500 NTKS 511
+ S
Sbjct: 384 TSSS 387
>SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex
subunit Sld3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 668
Score = 27.9 bits (59), Expect = 1.4
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 4/156 (2%)
Frame = +2
Query: 101 EYTKKHRHTTPMKKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSNRIDTKTKLKTIDMF 280
E + KHRH+ P + ++ S + + NTS IS +S+ S I K ++
Sbjct: 428 ERSHKHRHSAPPRSKLISSKSEAGRALPGNTSGASISNTSSPHSEASIS-----KDYEIL 482
Query: 281 MDQPKKSNLHQAHRNTSIAPSKNG--NPIGKHSPNKQTGVSHKENSIKKLISKETQTINK 454
+ S +H R+ S S NG + S + + + N +SK+ +++
Sbjct: 483 KRRRSNSGVHSLTRSDS---SFNGFERDTRRRSSDIARIKNREINLPSSSLSKQRNSMHD 539
Query: 455 -STFNTKSSQTERKKFNTKSIQ-TDPISVQKETTKS 556
ST + + + +K S+Q SVQ +TT S
Sbjct: 540 ISTNFPRRNLSFTEKLTMASLQGQSEESVQPKTTSS 575
>SPAC4G9.17c |mrps5||mitochondrial ribosomal protein subunit
S5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 387
Score = 27.5 bits (58), Expect = 1.8
Identities = 21/81 (25%), Positives = 37/81 (45%)
Frame = +2
Query: 365 KHSPNKQTGVSHKENSIKKLISKETQTINKSTFNTKSSQTERKKFNTKSIQTDPISVQKE 544
K+ P K+ + E S+++ ET K FN+ S E + + T P+S K+
Sbjct: 34 KNDPKKELNSNLNEKSVEESSKNET----KEQFNSSSIPRESESEGKTASNTSPLS-PKK 88
Query: 545 TTKSTDVFERMKEIDLEIQVL 607
+ +F + E D+ I+ L
Sbjct: 89 VENLSKLFNDINE-DVSIEEL 108
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 27.5 bits (58), Expect = 1.8
Identities = 21/112 (18%), Positives = 45/112 (40%), Gaps = 6/112 (5%)
Frame = +2
Query: 149 NTNYSHSIISKDDNTSPVDISTSSNNQSSNRIDTKTKLKTIDMFMDQPKKSNLH------ 310
N + SH + D + + IS ++ SN +D ++ + F ++ +
Sbjct: 208 NNHCSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVKPFASAQRQLQIFEGAIHG 267
Query: 311 QAHRNTSIAPSKNGNPIGKHSPNKQTGVSHKENSIKKLISKETQTINKSTFN 466
Q H +A S+N +G S +K V ++ ++ ++N F+
Sbjct: 268 QEHNLLGVAWSRNSRFVGAGSSDKNVYVWSATGDLRYVLPGHEGSVNHVDFH 319
>SPBC902.02c |ctf18|chl12|DNA replication factor C complex subunit
Ctf18|Schizosaccharomyces pombe|chr 2|||Manual
Length = 960
Score = 27.1 bits (57), Expect = 2.4
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 290 PKKSNLHQAHRNTSIAPSKNGNPIGKHSPNKQTGV--SHKENSIKKLISKETQTINKST 460
P+ SNL + N+ S+ G+P+ N+ + V S S+ + ++++QT N T
Sbjct: 143 PRDSNLLFRNYNSHTKTSEKGSPVNFEKENQDSNVLFSTGRTSVLHIDAEQSQTNNTVT 201
>SPAC1D4.03c |aut12||autophagy associated protein
Aut12|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +2
Query: 185 DNTSPVDISTSSNNQSSN-RIDTKTKLKTIDMF 280
DN+SP+++STS ++ S+N +D KL ++ F
Sbjct: 75 DNSSPLNVSTSVSSSSNNTAVDEIIKLLSLISF 107
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.1 bits (57), Expect = 2.4
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +2
Query: 137 KKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSNRIDTKTKLKTIDMFMDQPKKSNLHQA 316
+ +++T+ HS+ +SPVD S NNQ + T T ++F+ P S+ H
Sbjct: 51 QSYSSTSIIHSV------SSPVDCSLDVNNQINTINITSVSAGTNELFL--PTLSHAHAN 102
Query: 317 HRNTSI 334
R S+
Sbjct: 103 DREASL 108
>SPAC5D6.09c |mug86||acetate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 304
Score = 26.6 bits (56), Expect = 3.2
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -2
Query: 141 FFIGVVCLCFFVYSFLLTYLSEYPLSPVSNLLASLDGC 28
+ IG+ +C+F+++FL+ + +L SLD C
Sbjct: 187 YAIGLYLICWFIFTFLVLLCTVRSTLAFFSLFMSLDVC 224
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 26.6 bits (56), Expect = 3.2
Identities = 33/145 (22%), Positives = 61/145 (42%)
Frame = +2
Query: 110 KKHRHTTPMKKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSNRIDTKTKLKTIDMFMDQ 289
+K R TP+ + +N S+ + + S S+SSNN+ R ++ I +
Sbjct: 220 EKRRTYTPLSEISNGLNSNGVENSSITKSSPRSSSSSNNE---RFKDTSEESIIFTSPNT 276
Query: 290 PKKSNLHQAHRNTSIAPSKNGNPIGKHSPNKQTGVSHKENSIKKLISKETQTINKSTFNT 469
P+ +++Q T I P +SP+K + + + K L K +++S ++
Sbjct: 277 PEHPSVYQ----TDITPEIKLEHSDNNSPSKPE-IPFRHPTSKPLPPK---PLSRSKSSS 328
Query: 470 KSSQTERKKFNTKSIQTDPISVQKE 544
S R + N S + D S E
Sbjct: 329 LSRNQTRSQLNDLSAENDSTSNSTE 353
>SPBC106.20 |exo70|SPBC582.02|exocyst complex subunit Exo70
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 615
Score = 26.6 bits (56), Expect = 3.2
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = +2
Query: 401 KENSIKKLISKETQTINKSTFNTKSSQTERKKFN------TKSIQTDPISVQKETTKSTD 562
++ S L S T++ NKST + K + ++KF T +Q SV+ ET +T
Sbjct: 504 RQCSQNMLDSTYTKSQNKSTMSAKEREITKEKFRNFNEQVTSVVQVHRESVRFETGVATF 563
Query: 563 VFERMKEIDLEI 598
+ + +K+ L +
Sbjct: 564 LLQEVKKTVLPL 575
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 26.6 bits (56), Expect = 3.2
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 29 HPSKDAKRLETGDKGYSDKY-VKRKEYTKKHRHTTPMKKHNNTNYSHSIISKDDNTSPVD 205
+P K++E G + D Y +K+ + + + + +YS + D
Sbjct: 86 NPEDLGKKVEKGPR--PDIYDLKKSQQFELDTSRLSSDEESVLDYSKDSEDEQDYELRPR 143
Query: 206 ISTSSNNQSSNRIDTKTK 259
+S+S NN+S NR+ KTK
Sbjct: 144 VSSSWNNESYNRLPIKTK 161
>SPAC19E9.02 |fin1||serine/threonine protein kinase
Fin1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 26.6 bits (56), Expect = 3.2
Identities = 34/156 (21%), Positives = 58/156 (37%), Gaps = 2/156 (1%)
Frame = +2
Query: 95 RKEYTKKHRHTTPMKKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSNRIDTKTKLKTID 274
RKE + + HTT N S + D + N S+ D KL
Sbjct: 440 RKELSSRALHTTATLMKYRANASSLRTTPIDKDGQITSLQQKNGTSNQVADCMNKLLHTS 499
Query: 275 MFMDQPKKSNLHQAHRNTSIAPSKNGNPIGKHSPNKQTGVSHKENSIKKLISKETQTINK 454
+ + S L + P++ + + S +T VS S T T +K
Sbjct: 500 LDGKKLSPSELCNKFSDGEGLPNRKVSKLSVES--DETAVSASSGESVPTDSTLTDTKSK 557
Query: 455 STF-NTKSSQT-ERKKFNTKSIQTDPISVQKETTKS 556
S F + S Q+ +K +I++D +S + +K+
Sbjct: 558 SVFVHPPSPQSLYVEKLEKLNIRSDEVSKPSKASKT 593
>SPBC23G7.04c |nif1||SEL1 repear protein Nif1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 681
Score = 26.2 bits (55), Expect = 4.2
Identities = 34/163 (20%), Positives = 64/163 (39%), Gaps = 6/163 (3%)
Frame = +2
Query: 8 PNSARGKHPSKDAKR-LETGDKGYSDKY----VKRKEYTKKHRHTTPMKKHNNTNYSHSI 172
PNS + HP++ KR T DK +K K+ T +TP+ +++
Sbjct: 199 PNSIKSAHPAEPPKRPAFTRSATSPDKILPTRIKSKD-TVSSGDSTPLSGSSSSKGMLMS 257
Query: 173 ISKDDNTSPVDISTSSNNQSSNRIDTKTKLKTIDMFMDQPKKSNLHQAHRNTSIAPSKNG 352
+S +N S +S++ +SN + + + S +T I P+
Sbjct: 258 MSTSENHS---LSSNPELSNSNLLAKNESPADVSNNESGNESSKEPDKEHSTPIHPTTPV 314
Query: 353 NPIGKHSPNKQT-GVSHKENSIKKLISKETQTINKSTFNTKSS 478
+ + S +QT + ++ K KE +NK+ + S
Sbjct: 315 SRCARPSSRQQTISILQAQSPFLKKSDKERANLNKTMVSINKS 357
>SPBC1105.02c |lys4||homocitrate synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 418
Score = 26.2 bits (55), Expect = 4.2
Identities = 22/103 (21%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = +2
Query: 302 NLHQAHRNTSIAPSKNGNPIGKHSPNKQTGVSHKEN-SIKKLISKETQTINKSTFNTKSS 478
++ +A+ +I P NGNP G PN +S N SI + +E + + F+T+
Sbjct: 2 SVSEANGTETIKPPMNGNPYG---PNPSDFLSRVNNFSIIESTLREGEQFANAFFDTEKK 58
Query: 479 QTERKKFNTKSIQTDPISVQKETTKSTDVFERMKEIDLEIQVL 607
K + + ++ + +S E + ++ L+ ++L
Sbjct: 59 IQIAKALDNFGVDYIELTSPVASEQSRQDCEAICKLGLKCKIL 101
>SPBC1347.04 |tim54||TIM22 inner membrane protein import complex
subunit Tim54|Schizosaccharomyces pombe|chr 2|||Manual
Length = 347
Score = 26.2 bits (55), Expect = 4.2
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = +2
Query: 71 GYSDKYVKRKEYTKKHRHTTPMKKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSNRID 247
G+SD +KRK T+K +K +D N + D S N S+ I+
Sbjct: 164 GFSDDIMKRKLETEKLEANNKEEKEEKEGKDDKDDKEDSNDTKNDKKISKNEVDSSLIE 222
>SPCC1259.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 168
Score = 26.2 bits (55), Expect = 4.2
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Frame = +2
Query: 272 DMF-MDQPKKSNLHQAHRNTSIAPSKNGN---PIGKHSPNKQTGVSHKENSIKKLISKET 439
D+F +++P S + T+++ S N P HSP + G+S +S
Sbjct: 90 DVFTLEKPIASTHRWLSKLTALSKSTNSTLSTPKSFHSPLQSRGISPSSAQSSAAVSSSR 149
Query: 440 QTINKSTFNTKSSQTERKK 496
+ K T S + RKK
Sbjct: 150 KQKRKRTSEGPSERRARKK 168
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 25.8 bits (54), Expect = 5.5
Identities = 38/176 (21%), Positives = 59/176 (33%), Gaps = 7/176 (3%)
Frame = +2
Query: 77 SDKYVKRKEYTKKHRHTTPMKKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSNRIDTKT 256
S+KY K+ KK +T YSH K D S + I S + +
Sbjct: 129 SEKYSKKSSTRKKEHFNKKPSFPRDTEYSHIYNMKYDPRSGIGIRVKRQEPESLKKENNN 188
Query: 257 KLKTIDMFMDQPKKSNLHQAHRNTSIAPSKNGN-PIGKHSPNKQTG---VSHKENSIKKL 424
M Q K +++S PS +G P K S K S E SI
Sbjct: 189 SDYLPKSAMKQKK-----GGPKDSSKHPSNDGKIPESKPSVYKSRASNLFSSNEQSIHSS 243
Query: 425 ISKE---TQTINKSTFNTKSSQTERKKFNTKSIQTDPISVQKETTKSTDVFERMKE 583
+ ++ N +F S K N++ + +T+ F + +E
Sbjct: 244 FGSKFHFDKSSNPFSFEFSPSSNAAKPSNSEECNIPKFNSSFKTSNDFFTFTKTEE 299
>SPAC17A5.14 |exo2||exonuclease II Exo2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1328
Score = 25.8 bits (54), Expect = 5.5
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 17 ARGKHPSKDAKRLETGDKGYSDKYVKRKEYTKKHRH-TTPMKK 142
++G H S + + G G K ++ KE +KH H PM K
Sbjct: 1282 SKGNHHSTNGTQSIRGRGGKRGKPLRSKELNRKHDHIVQPMGK 1324
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 25.8 bits (54), Expect = 5.5
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 431 KETQTINKSTFNTKSSQTERKKFNTKSIQTDPISVQKETTKSTDVFERMKEIDLEIQV 604
K Q K + ++TE S+Q DP++V E ++ MK +D E QV
Sbjct: 284 KIKQAKKKQKRKSNKAETEGTNEPETSVQIDPLNVSMENWEN-----EMKNLDCETQV 336
>SPAC19G12.02c |pms1||MutL family mismatch-repair protein
Pms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 794
Score = 25.8 bits (54), Expect = 5.5
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 125 TTPMKKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSNRIDTKT-KLKTIDMFMDQP 292
+TP+ K N N S+ + + ++ I + +NRI +KT L+ + F +P
Sbjct: 493 STPVAKTINLNEIESVHNAESVSTLSSIPRTEQTSVANRIPSKTAALQKLKFFQSRP 549
>SPAC4G9.02 |||ribonuclease H2 complex subunit|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 326
Score = 25.4 bits (53), Expect = 7.3
Identities = 16/75 (21%), Positives = 32/75 (42%)
Frame = +2
Query: 116 HRHTTPMKKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSNRIDTKTKLKTIDMFMDQPK 295
H P + ++ N S + + +D N+S + S N + + + T D+ QP
Sbjct: 5 HDAWEPEELVSDNNSSENELQEDQNSSITFLPPSVNKSNPAKSNYYHSTVTDDISKSQPY 64
Query: 296 KSNLHQAHRNTSIAP 340
+ + +A R + P
Sbjct: 65 RLGVDEAGRGPVLGP 79
>SPAC1751.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 123
Score = 25.4 bits (53), Expect = 7.3
Identities = 12/49 (24%), Positives = 22/49 (44%)
Frame = +2
Query: 245 DTKTKLKTIDMFMDQPKKSNLHQAHRNTSIAPSKNGNPIGKHSPNKQTG 391
D + L + +D KS L AH ++ ++ I + +K+TG
Sbjct: 69 DLQNILNQVTYELDDKIKSKLQVAHEREAVFSKQSDRKISNNKADKKTG 117
>SPBC30B4.04c |sol1||SWI/SNF complex subunit
Sol1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 865
Score = 25.4 bits (53), Expect = 7.3
Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 1/129 (0%)
Frame = +2
Query: 2 LVPNSARGKHPSKDAKRLETGDKGYSDKYVKR-KEYTKKHRHTTPMKKHNNTNYSHSIIS 178
L+P + K L+ +S R K Y +K TTP H N + S+ S
Sbjct: 270 LLPYEEAWLAAQQQQKSLQQAKANHSANVQSRPKNYPQKPVQTTPEAVHANGSMHGSLHS 329
Query: 179 KDDNTSPVDISTSSNNQSSNRIDTKTKLKTIDMFMDQPKKSNLHQAHRNTSIAPSKNGNP 358
K + SP + ++N S T + + + P + ++S AP + P
Sbjct: 330 K--SPSP---AFTANRFSPAAPTTVSSERNAPPYPSAPTRPTPPTVQTSSSAAPVDSAEP 384
Query: 359 IGKHSPNKQ 385
+ + P K+
Sbjct: 385 VA-YQPIKK 392
>SPCC1682.08c |||RNA-binding protein Mcp2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 703
Score = 25.4 bits (53), Expect = 7.3
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = +2
Query: 125 TTPMKKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSNRIDT 250
+TP+ + ++++ ++D ++ V++S S+NN S+N T
Sbjct: 255 STPLSPEDVDLGTYTVKNRDSWSNEVNLSASTNNLSTNTSGT 296
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 25.4 bits (53), Expect = 7.3
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +2
Query: 404 ENSIKKLISKETQTINKSTFNTKSSQTERKKFNTKSI---QTDPISVQKETTKSTDVFER 574
E + + K T + + + + E TK I +T+ ++ QKET++S R
Sbjct: 376 EGNFFRRTKKPTPSATPAAHPDTARENELAAIQTKGISAGKTEQLNPQKETSRSKTHTSR 435
Query: 575 MKEIDLEIQVLLQGEV 622
+ ++ Q LLQ +
Sbjct: 436 GENVEDRPQSLLQNGI 451
>SPBC887.17 |||uracil permease |Schizosaccharomyces pombe|chr
2|||Manual
Length = 625
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/58 (24%), Positives = 31/58 (53%)
Frame = +2
Query: 332 IAPSKNGNPIGKHSPNKQTGVSHKENSIKKLISKETQTINKSTFNTKSSQTERKKFNT 505
+A S++ + GK+ V+ KE S+KK+ E +++++ ++S ++ F T
Sbjct: 556 MATSRSYSEDGKNEKTTHEDVTMKETSLKKM-DDERISVDEAVGESESFSNRQQDFRT 612
>SPBC1604.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 860
Score = 25.4 bits (53), Expect = 7.3
Identities = 29/121 (23%), Positives = 48/121 (39%), Gaps = 3/121 (2%)
Frame = +2
Query: 23 GKHPSKDAKRLETGDKGYSDKYVKRKEYTKKHRHTTPMKKHNNTNYSHSIISKDDNTSPV 202
GK S D L D + + K++ Y + H N H +S+ N++ +
Sbjct: 653 GKSRSIDEVILSIKDVIFDNNLYKQRSYQSGVAANAHLP-HRVPN-EHGGVSRIGNSNAL 710
Query: 203 D--ISTSSNNQSSNRIDTKTKLKTIDMFMDQPKKSNLHQAHRNT-SIAPSKNGNPIGKHS 373
+S+SS+ S DT++ + K S L +H N+ I SK + H
Sbjct: 711 GQPVSSSSSYSHSKGRDTRSSSYVVSSETSSLKSSRLILSHANSVRIQRSKGDVILNLHL 770
Query: 374 P 376
P
Sbjct: 771 P 771
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 25.4 bits (53), Expect = 7.3
Identities = 11/66 (16%), Positives = 28/66 (42%)
Frame = +2
Query: 335 APSKNGNPIGKHSPNKQTGVSHKENSIKKLISKETQTINKSTFNTKSSQTERKKFNTKSI 514
+P NG PIG +P + ++ ++ ++S+ + + R ++S
Sbjct: 166 SPYNNGYPIGAVNPTSAIPAQPPAQPVNNVLPSYVRSNSRSSARSTARSAPRSTQRSRSS 225
Query: 515 QTDPIS 532
+P++
Sbjct: 226 SANPVT 231
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 7.3
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 116 HRHTTPMKKHNNTNYSHSIISKDDNTSPVDIS-TSSNNQSSNRIDTKTKLKTI 271
H+ KH+++ SH ++TS + ++ TSS + +S+ T + + TI
Sbjct: 319 HKILDTKSKHSSSKSSHDSSQGLESTSSIALNPTSSISSTSSSSSTSSAISTI 371
>SPCC1682.11c |||DUF580 family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 574
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = -2
Query: 132 GVVCLCFFVYSFLLTYLSEYPLSPVSNLLASLDGCLP 22
G + L F YSFL+ + + + P ++ A++ P
Sbjct: 149 GFLTLALFTYSFLMVWRTNPNIPPATSPYAAIQKAFP 185
>SPCC31H12.06 |mug111||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 468
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 141 FFIGVVCLCFFVYSFLLTY 85
F I +V LCFF+YS L +
Sbjct: 284 FPIPIVLLCFFLYSLLTPF 302
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,398,972
Number of Sequences: 5004
Number of extensions: 48621
Number of successful extensions: 306
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 305
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 299817502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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