Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0750
(661 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0225 - 15995436-15995555,15995655-15995735,15995813-159959... 35 0.066
12_02_0770 - 23007202-23007333,23007475-23007555,23007642-230077... 33 0.15
08_02_1147 - 24688686-24689729,24689875-24690036,24690339-246903... 33 0.20
01_05_0078 + 17931998-17932062,17933320-17933416,17933506-179336... 31 0.81
01_01_0046 - 331758-332627 31 1.1
02_05_0784 + 31726453-31726563,31726820-31726897,31727307-317278... 30 1.4
08_02_0822 + 21549257-21550729,21550776-21550877 30 1.9
05_03_0134 + 8790409-8790421,8790716-8791023,8791836-8792153,879... 30 1.9
11_06_0388 + 23048576-23051546,23051830-23052371,23052444-230525... 29 2.5
06_01_0010 - 151694-151951,152433-152489,152683-152774,153432-15... 29 2.5
04_04_0775 - 27989704-27990281,27990407-27990653,27990743-279908... 29 2.5
04_04_0200 - 23529497-23531938,23532586-23533720,23534272-235344... 29 2.5
08_01_0620 - 5416197-5416225,5416333-5416652,5417144-5417235,541... 29 3.3
07_03_0363 + 17225472-17226778,17226910-17226917,17227313-172274... 29 3.3
11_03_0184 + 11317787-11318198,11318337-11318671,11318756-113190... 29 4.3
11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717 29 4.3
04_04_0285 - 24136865-24137000,24137554-24137611,24138142-241414... 29 4.3
07_03_1632 + 28271559-28271645,28272641-28272713,28273030-282733... 28 5.7
07_01_1034 - 8962703-8962748,8962831-8962991,8963068-8963905,896... 28 5.7
04_03_0658 + 18447986-18448117,18448204-18448317,18448388-184485... 28 5.7
03_05_0514 - 25082662-25082669,25082978-25083043,25083903-250840... 28 7.6
03_02_0472 - 8737955-8738580,8738704-8738767,8739090-8739239,873... 28 7.6
02_05_0410 + 28744716-28744841,28745361-28745965,28746151-287462... 28 7.6
02_04_0205 + 20897376-20897597,20898623-20898774,20899874-209000... 28 7.6
02_03_0300 + 17454622-17455402,17455535-17456977,17457015-174573... 28 7.6
02_02_0335 + 9063749-9064216,9064846-9064890,9065351-9065470,906... 28 7.6
01_07_0306 + 42638683-42638990,42639074-42639314,42639935-426402... 28 7.6
01_07_0226 + 42130300-42131430,42131530-42131715,42133244-421333... 28 7.6
>10_08_0225 -
15995436-15995555,15995655-15995735,15995813-15995956,
15996305-15996386,15996479-15996561,15996655-15996759,
15996869-15996907,15997004-15997060,15997701-15997769,
15997959-15998069,15998382-15998564
Length = 357
Score = 34.7 bits (76), Expect = 0.066
Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 1/120 (0%)
Frame = +2
Query: 26 KHPSKDAKRLETGDKGYSDKYVKRKEYTKKHRHTTPMKKHNNTNYSHSII-SKDDNTSPV 202
+ PSK LE+G+ SDK K++ +K + + N + + K+D +P
Sbjct: 239 QQPSKIDLELESGEYFMSDKKKSAKKWQEKLEKQSEKAEENKRKREAAFVPPKEDTATPY 298
Query: 203 DISTSSNNQSSNRIDTKTKLKTIDMFMDQPKKSNLHQAHRNTSIAPSKNGNPIGKHSPNK 382
+ + S++N K+ K F + N+ + +A ++ P KH +K
Sbjct: 299 ESAKSTSNNDEIADMAKSLKKKAKEFRKSEAQENV---RLESYVASNEGSRPKKKHKSSK 355
>12_02_0770 -
23007202-23007333,23007475-23007555,23007642-23007742,
23007855-23008455,23008742-23009365,23010294-23010377
Length = 540
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +2
Query: 341 SKNGNPIGKHSPNKQTGVSHKENSIKKLISKETQTINKSTFNTKSSQTERKKFNTKSIQT 520
+ G + P K+TG S K+N+ KK +K T + F T S+ + K + +S T
Sbjct: 311 TSEGVEVHTREPAKKTGSSSKKNAAKKAKTKSTSYEIDNDFVTSRSKRDGNKRSRES--T 368
Query: 521 DPISVQKETTKSTDV 565
D + ++E T +++
Sbjct: 369 DADNSEEEPTSDSEL 383
>08_02_1147 -
24688686-24689729,24689875-24690036,24690339-24690368,
24690713-24690860,24691302-24691489
Length = 523
Score = 33.1 bits (72), Expect = 0.20
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +2
Query: 47 KRLETGDKGYSDKYVKRKEYTKKHRHTTPMKKHNNTNYSHSIIS--KDDNTSPVDISTSS 220
K +E K +K KRK + K+H H + K+H+++ S S S +D+ V S
Sbjct: 175 KSVEAEKKQKEEKKEKRK-HKKRHHHKSKSKRHHSSENSDSEESDGRDERRKSVQASEHK 233
Query: 221 NNQSSNRIDTK 253
+ +R D K
Sbjct: 234 REEKRSRHDKK 244
>01_05_0078 +
17931998-17932062,17933320-17933416,17933506-17933601,
17933957-17933988,17935143-17935595,17935831-17935975,
17936058-17936159,17937798-17937890,17939448-17939489,
17940092-17940202,17940446-17940517,17940596-17940714,
17940981-17941044,17941133-17942782
Length = 1046
Score = 31.1 bits (67), Expect = 0.81
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +2
Query: 89 VKRKEYTKKHRHTTPMKKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSNR 241
VK KEY + + P+KK TNY S + +D S S++N+S R
Sbjct: 649 VKAKEYHRSD--SLPVKKQAETNYQQISQSGKEKEHSMDESNSTHNRSRKR 697
>01_01_0046 - 331758-332627
Length = 289
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Frame = +2
Query: 146 NNTNYSHSIISKDDNTSPVDISTSSNNQSSNRIDTKTKLK--TIDMFMDQPKKSNLHQAH 319
NN+ HS S D + + SSN++S ++ +K K + + ++ KK + Q
Sbjct: 202 NNSLLLHSSCSGGDLGVHLKLKLSSNSKSKSKTKSKEKQQHNVVADTSNKEKKPDSSQEK 261
Query: 320 RNTSIAPSKNGNPIGKHSPNKQTGVSHK 403
+ + +K P NK G ++K
Sbjct: 262 KEAGTSAAKPNKPSAAAKGNKPAGAANK 289
>02_05_0784 +
31726453-31726563,31726820-31726897,31727307-31727843,
31728225-31728305,31728394-31728457,31728738-31728825,
31728934-31729018,31729103-31729186
Length = 375
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 7/94 (7%)
Frame = +2
Query: 173 ISKDDNTSPVDISTSSNNQSSNRIDTKTKLKTIDMFMDQPKKSNLHQAHRNTSIAPSKNG 352
+ KD+ S D + N+ + + DT + + F+ SN + I P +NG
Sbjct: 65 VDKDEEKSEDDKDSEQNSDTPDGPDTSSFRAFLISFLSSSGSSN-----GSMEIIPDQNG 119
Query: 353 N-------PIGKHSPNKQTGVSHKENSIKKLISK 433
P+GK K +S ++SI K+ISK
Sbjct: 120 ELGYPTLTPMGKSKKGKSGLLSRGKHSIGKIISK 153
>08_02_0822 + 21549257-21550729,21550776-21550877
Length = 524
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/102 (19%), Positives = 46/102 (45%)
Frame = +2
Query: 161 SHSIISKDDNTSPVDISTSSNNQSSNRIDTKTKLKTIDMFMDQPKKSNLHQAHRNTSIAP 340
++ II+K+ SP D+ Q+ +++ K+ +++ +RN +
Sbjct: 362 ANEIITKESELSPKDVPKERRPQALSKLSATRKV------------GSMNNLYRNVHVIT 409
Query: 341 SKNGNPIGKHSPNKQTGVSHKENSIKKLISKETQTINKSTFN 466
K+ P GK+S + G + +K++ S++ +N + N
Sbjct: 410 DKSSTPRGKNS-TPRAGTERTRSRLKRVQSEKMVEMNDTRKN 450
>05_03_0134 +
8790409-8790421,8790716-8791023,8791836-8792153,
8793021-8793212,8793383-8793618,8793696-8793953,
8794237-8794315,8797728-8797895
Length = 523
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Frame = +2
Query: 59 TGDKGYSDKYVKRKEYTKKHRHTTPMKKHN--NTNYSHSIISKDDNTSPVDISTSSNNQS 232
TG + K+ K+ E +K PMKKHN + + S ++ + SP ++ ++
Sbjct: 178 TGYRQAMKKWKKQDENMEKAWKEVPMKKHNPRSRKWQQSELAIQE-VSPTQQLETAQSEP 236
Query: 233 SNRIDTKTKLKTIDMFMDQPKKSNLHQAHRNT---SIAPSKNGNP 358
+ + + + +QPK S L Q+ + P NG P
Sbjct: 237 KKQAEGEIEEVPEQAMPNQPKPSQLEQSQPEEPKGANVPVMNGKP 281
>11_06_0388 +
23048576-23051546,23051830-23052371,23052444-23052517,
23053006-23053090,23053281-23053367,23053585-23053657,
23053882-23053925,23054041-23054169,23054301-23054402,
23054529-23054585
Length = 1387
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/95 (24%), Positives = 34/95 (35%)
Frame = +2
Query: 281 MDQPKKSNLHQAHRNTSIAPSKNGNPIGKHSPNKQTGVSHKENSIKKLISKETQTINKST 460
+D+P KSNL + SK +P K G S++ + S + T +
Sbjct: 212 LDEPSKSNLEDPVNGNQVETSKVVSPSCSIDQEKDMGSSNRGSVDSNFFSPQGGTDSLGD 271
Query: 461 FNTKSSQTERKKFNTKSIQTDPISVQKETTKSTDV 565
N QT K I T SV + T +
Sbjct: 272 ENNHYIQTTSVKEEVVEIYTRDSSVSIDGTDQAGI 306
>06_01_0010 -
151694-151951,152433-152489,152683-152774,153432-153531,
153585-154211,154300-154638,154740-154991,155083-155556
Length = 732
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/49 (26%), Positives = 27/49 (55%)
Frame = +2
Query: 140 KHNNTNYSHSIISKDDNTSPVDISTSSNNQSSNRIDTKTKLKTIDMFMD 286
++++ N S+ S+D+ S + +SSNN S D +++ + F+D
Sbjct: 517 RNSSNNKKESVRSEDEAGSCCNTGSSSNNHSEENDDAASQIMVLLQFID 565
>04_04_0775 -
27989704-27990281,27990407-27990653,27990743-27990837,
27990918-27992388,27993142-27993194,27993295-27993430
Length = 859
Score = 29.5 bits (63), Expect = 2.5
Identities = 33/165 (20%), Positives = 62/165 (37%), Gaps = 2/165 (1%)
Frame = +2
Query: 77 SDKYVKRKEYTKKHRHTTPMKKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSNRIDTKT 256
SDKY + + R +N + S KDD+T + + S + S+ +
Sbjct: 343 SDKYARHFSLRELKRRLRLAISNNRKDVMSSTFQKDDSTQQFILESMSTSMDSSECEKAE 402
Query: 257 KLKTIDMFMDQPKKSNLHQAHRNTSIAPSKNGNPIGKHSPNKQTGVSHKENSIKKLISKE 436
K +D P+ S + T A S KH + + +++N +++ K
Sbjct: 403 KPSIVDK-KTIPEDSGSGMGNDATHCASSFFYEKAKKHLIER---LDNQKNDTSQIVHKS 458
Query: 437 TQ--TINKSTFNTKSSQTERKKFNTKSIQTDPISVQKETTKSTDV 565
+ + N SQT+ + + K + S TT+ D+
Sbjct: 459 EPFGKLLSYSENDTFSQTDCPQEDVKLSEDSTASSALLTTEQEDI 503
>04_04_0200 -
23529497-23531938,23532586-23533720,23534272-23534463,
23535527-23535570
Length = 1270
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/80 (21%), Positives = 34/80 (42%)
Frame = +2
Query: 20 RGKHPSKDAKRLETGDKGYSDKYVKRKEYTKKHRHTTPMKKHNNTNYSHSIISKDDNTSP 199
R +H S+ + ETG K + + K R P KKH+ TN ++ + +
Sbjct: 407 RDEHNSRKVAKNETGKSMLMSKTCLKSKICKNKRLKFPGKKHSKTNRLNTQVRTHTDGDM 466
Query: 200 VDISTSSNNQSSNRIDTKTK 259
+ ++ +S+ + T+
Sbjct: 467 HEHTSEDEEESTMHVQKPTE 486
>08_01_0620 -
5416197-5416225,5416333-5416652,5417144-5417235,
5417304-5417394,5417489-5417577,5417812-5417929,
5418007-5418098,5418180-5418215,5418323-5418403,
5418510-5418617,5418809-5418901,5419045-5419146,
5419345-5419449,5419526-5419612,5419952-5420227
Length = 572
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = +2
Query: 17 ARGKHPSKDAKRLETGDKGYSDKYVKRKEYTKKHRHTT-PMKKHNNTNYSHSIISKDDNT 193
A+ + P K A +G D +E + + TT P+K+ ++++ S S D++
Sbjct: 64 AKKQPPPKKAASSSSGSSSEEDSSESEEEVKVQVKKTTKPVKQESSSDESSDESSDDEDA 123
Query: 194 SPVDISTSSNNQSSNRIDTKTKLKTIDMFMDQPKK 298
P D ++N + + D MD+ +K
Sbjct: 124 KPAD-PVANNGLKKGKPASSDSESDSDDEMDEDEK 157
>07_03_0363 +
17225472-17226778,17226910-17226917,17227313-17227488,
17227822-17227882,17227955-17228053,17228155-17228249,
17228411-17228482,17228668-17228735,17228934-17229390,
17229486-17229596
Length = 817
Score = 29.1 bits (62), Expect = 3.3
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 1/125 (0%)
Frame = +2
Query: 203 DISTSSNNQSSNRIDTKTKLKTIDMFMDQPKKSNLHQAHRNTSIAPS-KNGNPIGKHSPN 379
D T N+++ RI + +++ +Q + + + R + K GN K S
Sbjct: 253 DFGTRDNDRNDRRIGIQLGGNSVERRENQREDRDAEKWDRERKDSQKDKEGNDREKDSAK 312
Query: 380 KQTGVSHKENSIKKLISKETQTINKSTFNTKSSQTERKKFNTKSIQTDPISVQKETTKST 559
+ + + KEN+I + + + + N Q K KS DP ++E K
Sbjct: 313 ESSVATEKENAILEKTASDGAVKSAEHENKTVEQKTLKDDAWKSHDRDPKDKKRE--KDM 370
Query: 560 DVFER 574
D ER
Sbjct: 371 DAGER 375
>11_03_0184 +
11317787-11318198,11318337-11318671,11318756-11319048,
11319125-11319483,11319549-11319748,11319823-11320012,
11320084-11320188,11320262-11320338,11320428-11320649
Length = 730
Score = 28.7 bits (61), Expect = 4.3
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Frame = +2
Query: 98 KEYTKK-HRHTTPMKKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSNRIDTKTKLKTID 274
+E TKK + TP KK T + + + P DI S + + +DT + +T
Sbjct: 318 RETTKKLPKQATPRKK---TFSRPAPKIRKSSRKPSDIDPSGKDSNPTNVDTSSSKETGP 374
Query: 275 MFMDQPKKSNLHQAHRNTSIAPSKNGNPIGKHSPNKQTGVSHK 403
D P S+ A N + PS N PIG S + G + +
Sbjct: 375 TAEDHP--SDNQPATDN--VEPS-NEPPIGNQSAEAEVGANQE 412
>11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717
Length = 1055
Score = 28.7 bits (61), Expect = 4.3
Identities = 48/177 (27%), Positives = 72/177 (40%), Gaps = 23/177 (12%)
Frame = +2
Query: 20 RGKHPSKDAKRLETGDKG---YSDKYVKRKEYTKKHRH-TTPMKKHNNTNY--------- 160
+ ++ SKDA L+ DKG V KK ++ + + K+ NT+
Sbjct: 383 KNRNTSKDADGLDMDDKGSVPSKGATVDTSRQIKKSKNQNSAVNKNKNTSKDADGLDMDG 442
Query: 161 SHSIISK---DDNTSPVDISTSSNNQSSNRIDTKTKLKTIDMFMDQPKKSNLHQAHRNTS 331
S+ SK DD +S S + NN + +T +D MD A +TS
Sbjct: 443 EGSVPSKGATDDASSKTKKSKNQNNSAKKNKNTSKDADGLD--MDDKGSVPRKGATDDTS 500
Query: 332 I--APSKNGNPIGKHSPNKQTGVSHKE--NSIKKLISK---ETQTINKSTFNTKSSQ 481
I SKN N K + N E + KKL K ET + +KS T+S++
Sbjct: 501 IKTKKSKNKNRSAKKNKNTSKDADGLETVGASKKLSKKAVDETLSDSKSARRTRSTR 557
Score = 28.3 bits (60), Expect = 5.7
Identities = 44/166 (26%), Positives = 64/166 (38%), Gaps = 1/166 (0%)
Frame = +2
Query: 11 NSAR-GKHPSKDAKRLETGDKGYSDKYVKRKEYTKKHRHTTPMKKHNNTNYSHSIISKDD 187
NSA+ K+ SKDA L+ DKG V RK T T KK N N S K+
Sbjct: 467 NSAKKNKNTSKDADGLDMDDKG----SVPRKGATDDTSIKT--KKSKNKNRS---AKKNK 517
Query: 188 NTSPVDISTSSNNQSSNRIDTKTKLKTIDMFMDQPKKSNLHQAHRNTSIAPSKNGNPIGK 367
NT S ++ + K K +D + K + R T K G P+
Sbjct: 518 NT-----SKDADGLETVGASKKLSKKAVDETLSDSKSA------RRTRSTRMKGGTPVAL 566
Query: 368 HSPNKQTGVSHKENSIKKLISKETQTINKSTFNTKSSQTERKKFNT 505
K +G K+ K T + ++ ++ + RKK+ T
Sbjct: 567 KGRGKDSGAES-----LKVEEKNTALLKENKVGRRAG-SARKKYKT 606
>04_04_0285 - 24136865-24137000,24137554-24137611,24138142-24141480,
24141789-24142218,24142861-24142928,24143015-24143165
Length = 1393
Score = 28.7 bits (61), Expect = 4.3
Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 7/167 (4%)
Frame = +2
Query: 32 PSKDAKRLETGDKGYSDKYVK--RKEYTKKHRHTTPMKKHNNTNYSHSIISKDDNTSPVD 205
P+ D + ++ G + +S + R E+ +K + +NN ++ S++++D + D
Sbjct: 1124 PNSDHRDIDNGVQDFSFSVAQEGRMEHDRK-------ENNNNVIWNSSMLTQDPKDATCD 1176
Query: 206 ISTSSNNQSSNRIDTKTKLKTIDMFMDQPKKSNLHQAHRNTSIAPSKNGNPI--GKHSPN 379
NQS + D + L ID K + + A SKN + GK PN
Sbjct: 1177 SRVKKLNQSKSGSDNQGNL-PIDKDHALMDKGQRKSSSQTKPHAESKNFDRFSNGKADPN 1235
Query: 380 KQT--GVSHKENSIKKLISKETQ-TINKSTFNTKSSQTERKKFNTKS 511
++ + + S TQ T S F + + RK++ S
Sbjct: 1236 SKSIRNLVKSFSMSPPASSDSTQGTPQNSRFRLAARKVPRKRYEQTS 1282
>07_03_1632 + 28271559-28271645,28272641-28272713,28273030-28273361,
28273455-28274791,28275451-28275848,28275963-28277644,
28277727-28277884,28278645-28278802,28279110-28279270,
28279826-28280014
Length = 1524
Score = 28.3 bits (60), Expect = 5.7
Identities = 34/154 (22%), Positives = 62/154 (40%), Gaps = 3/154 (1%)
Frame = +2
Query: 77 SDKYVKRKEYTKKHRHTTPMKKHNNTNYSHSI--ISKDDNTSPVDISTSSNNQSSNRIDT 250
S K + ++ +H T P+ K + N S S KD N T S S
Sbjct: 868 SKKRIVKEWEESQHNSTPPVSKMSIVNQSSSSKETCKDQNLK----ETKSKLTKSEEPFA 923
Query: 251 KTKLKTIDMFMDQPKKSNLH-QAHRNTSIAPSKNGNPIGKHSPNKQTGVSHKENSIKKLI 427
T K+I + NL+ + +++ K+G + + + + E + L
Sbjct: 924 MTDSKSIKVAHSNQTSRNLNNELFEDSTPFAVKSGMSEPPENRSSEQALDLAEPASSDLA 983
Query: 428 SKETQTINKSTFNTKSSQTERKKFNTKSIQTDPI 529
+T + S+ +K+S ++R+K N +T PI
Sbjct: 984 YFQTTAVTSSS--SKASGSQRRKQNFHVAKTSPI 1015
>07_01_1034 -
8962703-8962748,8962831-8962991,8963068-8963905,
8963991-8964128,8964206-8964355,8964436-8964683,
8964825-8964953,8965735-8965960,8966909-8966975,
8967488-8967551,8968902-8969000,8969074-8969157,
8969240-8969321,8969412-8969460,8969664-8969769,
8970650-8970734,8970814-8970917,8970994-8971109,
8971187-8971373,8972005-8972113,8972633-8972761,
8973365-8973449,8973812-8973947,8974078-8974230,
8974488-8974634,8974801-8974941,8975580-8975903
Length = 1400
Score = 28.3 bits (60), Expect = 5.7
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +2
Query: 398 HKENSIKKLISKETQTI--NKSTFNTKSSQTERK-KFNTKS--IQTDPISVQKETTKSTD 562
H E IK +I++E T +K F K S+ +K K NT+ + T P V + T++ D
Sbjct: 390 HNEKKIKDIIAEEEITFAKDKKKFKKKDSKRRKKEKNNTEQNVVVTRPPKVSYK-TRTID 448
Query: 563 VFERMKEI 586
F R I
Sbjct: 449 FFGRPTHI 456
>04_03_0658 +
18447986-18448117,18448204-18448317,18448388-18448507,
18448589-18449215,18449289-18449462,18449545-18449809,
18449889-18449959,18450043-18450145,18450221-18450280,
18450533-18450744,18450830-18450901,18451446-18451502,
18451598-18451882,18452359-18452371,18452396-18452463,
18452649-18452747,18452836-18452967,18453038-18453141,
18453234-18453423,18453519-18453524
Length = 967
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 137 KKHNNTNYSHSIISKDDNTSPVDI 208
KKHNNT++ + S N PVDI
Sbjct: 401 KKHNNTSFFEMVDSSIPNMLPVDI 424
>03_05_0514 -
25082662-25082669,25082978-25083043,25083903-25084017,
25084769-25084843,25085285-25085338,25085420-25085471,
25087308-25087447,25087993-25088077,25088358-25088431,
25088533-25088616,25088617-25088653,25089569-25089872,
25090371-25090536,25091053-25091076
Length = 427
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 125 TTPMKKHNNTNYSHSIISKDDNTSPVDISTSSNNQSSN--RIDTKTKLKTIDMFMDQPKK 298
T P + + N S++ D+T+P D TSS + ++N R D +D F ++ KK
Sbjct: 276 TEPTAREASANLHASLL---DSTTPSDPLTSSQHPAANTVRADATVAADQVDTFDEELKK 332
>03_02_0472 -
8737955-8738580,8738704-8738767,8739090-8739239,
8739311-8739422,8739686-8739708
Length = 324
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +2
Query: 17 ARGKHPSKDAKRLETGDKGYSDKYVKRKEYT--KKHRHTTPMKKHNNTNYSHS 169
+R P + + D S Y RK Y+ K R + K+H+ +YSHS
Sbjct: 258 SRSVSPQRSYSHSCSPDSQRSGSYSPRKRYSERKPSRSRSSGKRHSRESYSHS 310
>02_05_0410 +
28744716-28744841,28745361-28745965,28746151-28746270,
28746597-28746737,28748626-28749370
Length = 578
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 104 YTKKHRHTTPMKKH--NNTNYSHSIISKDDNTSPVDISTSSNNQSSN 238
YT +H H P +++ + SH + N+S S++S N SS+
Sbjct: 362 YTSEHNHPWPTQRNALAGSTRSHHAKNSSSNSSSSGASSASKNNSSH 408
>02_04_0205 +
20897376-20897597,20898623-20898774,20899874-20900084,
20900734-20900872,20901310-20901341,20901471-20901557,
20901720-20901932,20903687-20903869,20903979-20904084,
20905042-20905064,20905511-20905570
Length = 475
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 311 QAHRNTSIAPSKNGNPIGKHSPNKQT 388
+ +R S+APSK G P G S N +T
Sbjct: 137 KTNRQPSVAPSKPGLPFGVDSDNDET 162
>02_03_0300 +
17454622-17455402,17455535-17456977,17457015-17457317,
17458429-17458519,17458623-17459757,17459998-17460077,
17460449-17460533,17460614-17460705,17461079-17461147,
17461227-17461263,17461351-17461433,17461695-17461840,
17461868-17462138,17462245-17462281,17462428-17462721
Length = 1648
Score = 27.9 bits (59), Expect = 7.6
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 8/107 (7%)
Frame = +2
Query: 284 DQPKKSNLHQAHRNTSIAPSKNGNPIGKHSPNKQTGVS--------HKENSIKKLISKET 439
+ P S + + N S P+KN +PN Q G S ++I K +T
Sbjct: 305 EPPTCSERNTTNINLSEFPAKNDQSKFATNPNDQIGASFGLCDSHFSDVHAIGKKRGYDT 364
Query: 440 QTINKSTFNTKSSQTERKKFNTKSIQTDPISVQKETTKSTDVFERMK 580
T ++ +F+ Q+ + + +DP+S ET T+ +RM+
Sbjct: 365 ITDHQVSFDAYLEQSNSR----RQFYSDPLSTSSETYLLTETCKRMR 407
>02_02_0335 +
9063749-9064216,9064846-9064890,9065351-9065470,
9066025-9067527
Length = 711
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 10/63 (15%)
Frame = +2
Query: 116 HRHTTPMKKHNN--------TNYSHSIISKDDNTSPVDISTSSN--NQSSNRIDTKTKLK 265
H HT P + + T YSHS++ + + S V I + N SS+R T+ +
Sbjct: 519 HDHTGPRRSYTGNMDAPKRRTEYSHSVVGESSHMSDVQIYSQCNKARSSSSRPWHATRTQ 578
Query: 266 TID 274
ID
Sbjct: 579 EID 581
>01_07_0306 + 42638683-42638990,42639074-42639314,42639935-42640236,
42640431-42640607,42640853-42641617,42641697-42641791,
42641889-42641951,42642047-42642135,42642229-42642324,
42642457-42643104,42643596-42643628,42643838-42643912,
42644442-42644603,42644604-42644674,42644758-42644815,
42645196-42645394,42645487-42645552,42645699-42646183
Length = 1310
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/56 (23%), Positives = 27/56 (48%)
Frame = +2
Query: 239 RIDTKTKLKTIDMFMDQPKKSNLHQAHRNTSIAPSKNGNPIGKHSPNKQTGVSHKE 406
R++T L +D+F KK LH+ + + + +H+ NK +++K+
Sbjct: 1004 RVNTYLTLVLLDLFQVNQKKCQLHKLDKAIRDTKNMEERSLEQHAMNKLVEMAYKK 1059
>01_07_0226 +
42130300-42131430,42131530-42131715,42133244-42133345,
42133425-42133481,42133563-42133658,42133736-42133828,
42133945-42134064,42134155-42134187,42134266-42134316,
42135129-42135191
Length = 643
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 341 SKNGNPIGKHSPNKQTG--VSHKENSIKKLISKETQTINKSTFNTKSSQTERKKFN 502
+K+ +P + K G K+NSI+ + S Q I+K K + +R+K +
Sbjct: 208 AKDSSPTAEKGKGKHIGYEAQQKKNSIEDVKSSSQQEISKPKKKKKQKKRQRRKMD 263
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,525,825
Number of Sequences: 37544
Number of extensions: 237353
Number of successful extensions: 812
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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