Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0741
         (697 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    43   0.006
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    40   0.044
UniRef50_Q4K1A6 Cluster: Flippase Wzx; n=1; Streptococcus pneumo...    36   1.3  
UniRef50_Q00106 Cluster: Uncharacterized gene 65 protein; n=1; I...    34   2.9  
UniRef50_Q6CML9 Cluster: Similar to sp|P53009 Saccharomyces cere...    33   6.7  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 43.2 bits (97), Expect = 0.006
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = -2

Query: 117 FLLLRWVDELTAHLVLTDYRSP 52
           FLLLRWVDELTAHLVL+ Y SP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175



 Score = 42.3 bits (95), Expect = 0.011
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = -3

Query: 635 LKWVXEITAHLVLSGYWSP 579
           L+WV E+TAHLVLSGYWSP
Sbjct: 157 LRWVDELTAHLVLSGYWSP 175


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 40.3 bits (90), Expect = 0.044
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = -2

Query: 456 AGWWYLPVRTHKRSYHQ 406
           A WWYLP RTHKRSYH+
Sbjct: 569 AEWWYLPARTHKRSYHR 585


>UniRef50_Q4K1A6 Cluster: Flippase Wzx; n=1; Streptococcus
           pneumoniae|Rep: Flippase Wzx - Streptococcus pneumoniae
          Length = 505

 Score = 35.5 bits (78), Expect = 1.3
 Identities = 20/59 (33%), Positives = 33/59 (55%)
 Frame = +3

Query: 297 ILREYLKNLFRNELLGLTTLFWYSNSKYLLSNILVFIGGMTSCESARVGTTTPPISAVK 473
           I R  L N+F +  LG+TT+  YSN  Y++ ++  F+  +++  SA VG +    S  K
Sbjct: 242 ITRNSLDNIFISTFLGITTVGIYSNYYYIMISVKGFLDVVSTGMSASVGHSVATESVEK 300


>UniRef50_Q00106 Cluster: Uncharacterized gene 65 protein; n=1;
            Ictalurid herpesvirus 1|Rep: Uncharacterized gene 65
            protein - Ictalurid herpesvirus 1 (IcHV-1) (Channel
            catfish herpesvirus)
          Length = 1434

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 19/52 (36%), Positives = 30/52 (57%)
 Frame = -1

Query: 463  EIGGVVVPTRADSQEVIPPIKTSIFDNKYFELLYQNNVVKPRSSFLKRFFKY 308
            +IGG +V   A +QE IPP    +F N ++E L   + + P  S+LK F ++
Sbjct: 1374 KIGGRLVKLVATNQEGIPPEYIILFTNSHYEPLVTEDTMIP-DSYLKDFIEW 1424


>UniRef50_Q6CML9 Cluster: Similar to sp|P53009 Saccharomyces
           cerevisiae YGL083w SCY1 singleton; n=1; Kluyveromyces
           lactis|Rep: Similar to sp|P53009 Saccharomyces
           cerevisiae YGL083w SCY1 singleton - Kluyveromyces lactis
           (Yeast) (Candida sphaerica)
          Length = 767

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
 Frame = -1

Query: 523 KYSYNSCPTFQTETHYCFTAEIGGVVVPTRADSQEVIPPIKTSIFDNKYFE-LLYQNNVV 347
           KYSY++ PTF  E    +T   G     + ++S   I  +   IFD K FE  L    ++
Sbjct: 12  KYSYSNTPTFTAEPWSVYT---GKPKSSSSSNSGGPIDKVSVFIFDKKQFESYLLHYGII 68

Query: 346 KPRSSFLKRFF 314
           K ++S   + F
Sbjct: 69  KSKNSSHDKLF 79


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 657,897,136
Number of Sequences: 1657284
Number of extensions: 12312326
Number of successful extensions: 27806
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27800
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)