Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0739
         (673 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IB81 Cluster: Putative uncharacterized protein MAL8P1...    34   3.6  
UniRef50_Q4A644 Cluster: Putative uncharacterized protein; n=2; ...    33   8.3  
UniRef50_Q6LF19 Cluster: Putative uncharacterized protein; n=1; ...    33   8.3  

>UniRef50_Q8IB81 Cluster: Putative uncharacterized protein
           MAL8P1.30; n=4; Plasmodium|Rep: Putative uncharacterized
           protein MAL8P1.30 - Plasmodium falciparum (isolate 3D7)
          Length = 643

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
 Frame = +2

Query: 125 YFKNLSVSLPFF*LICFILSQYILCYIIQDYQ*LRNNFFIFL----VFRIISRYDINMYR 292
           Y  N  +  P F  IC + + + L Y++ +   +  NF +F+     F   + YD+  + 
Sbjct: 351 YMSNTLMCTPTFIFICLVNTIFFLFYLVTNNFKISTNFIVFMNCVPFFEQWNIYDLKCFH 410

Query: 293 YFKKM*ESLKCRKL-DMLFQL*YQGY 367
           +F ++     C  + +    L Y GY
Sbjct: 411 FFYRIHYEFSCLNICNSYAMLTYTGY 436


>UniRef50_Q4A644 Cluster: Putative uncharacterized protein; n=2;
           Mycoplasma synoviae 53|Rep: Putative uncharacterized
           protein - Mycoplasma synoviae (strain 53)
          Length = 156

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 10/26 (38%), Positives = 21/26 (80%)
 Frame = +1

Query: 136 FISFLTIFLTNLFYIISIHTLLYNPR 213
           F++FL++F+T+   I++++ + YNPR
Sbjct: 49  FLNFLSVFITSAIIILNLYAIRYNPR 74


>UniRef50_Q6LF19 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 337

 Score = 32.7 bits (71), Expect = 8.3
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +2

Query: 119 NYYF-KNLSVSLPFF*LICFILSQYILCYII-QDYQ*LRNNFFIFLVFRIISRYDINMYR 292
           NYYF  N+      F  +  I S Y+  Y I   Y  L  N+FIFL+F   + Y +N+  
Sbjct: 223 NYYFINNIHNFFSSFFFLTSISSIYLADYYIWASYYFLSFNYFIFLLFNYYNMYYLNVIP 282

Query: 293 YF 298
            F
Sbjct: 283 KF 284


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 492,895,667
Number of Sequences: 1657284
Number of extensions: 9010436
Number of successful extensions: 15129
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15121
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51652897375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)