BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0739 (673 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_06_0033 + 25074301-25074393,25074680-25075203,25076367-250764... 30 1.5 06_03_1024 - 26958473-26958661,26958750-26958815,26959234-269593... 28 7.8 >05_06_0033 + 25074301-25074393,25074680-25075203,25076367-25076442, 25076549-25076641,25077167-25077253,25077338-25078095, 25078447-25078575,25079145-25079265 Length = 626 Score = 30.3 bits (65), Expect = 1.5 Identities = 11/22 (50%), Positives = 17/22 (77%) Frame = -3 Query: 371 NSNPDIIIEKAYLIFYILKTPT 306 +S+ D++ EK Y++FYIL T T Sbjct: 308 SSSQDVLSEKVYILFYILSTKT 329 >06_03_1024 - 26958473-26958661,26958750-26958815,26959234-26959303, 26959526-26959773,26959938-26960029,26960726-26960871, 26961001-26961185,26961721-26961838,26961948-26962087 Length = 417 Score = 27.9 bits (59), Expect = 7.8 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = -3 Query: 209 GLYNRVCIEII*NKLVKKMVRKLI 138 G +CIE++ N+ ++KMVR L+ Sbjct: 338 GTTRAICIELVANRFLRKMVRVLV 361 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,634,641 Number of Sequences: 37544 Number of extensions: 190154 Number of successful extensions: 217 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 216 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 217 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1703141568 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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