Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0739
         (673 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_06_0033 + 25074301-25074393,25074680-25075203,25076367-250764...    30   1.5  
06_03_1024 - 26958473-26958661,26958750-26958815,26959234-269593...    28   7.8  

>05_06_0033 +
           25074301-25074393,25074680-25075203,25076367-25076442,
           25076549-25076641,25077167-25077253,25077338-25078095,
           25078447-25078575,25079145-25079265
          Length = 626

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = -3

Query: 371 NSNPDIIIEKAYLIFYILKTPT 306
           +S+ D++ EK Y++FYIL T T
Sbjct: 308 SSSQDVLSEKVYILFYILSTKT 329


>06_03_1024 -
           26958473-26958661,26958750-26958815,26959234-26959303,
           26959526-26959773,26959938-26960029,26960726-26960871,
           26961001-26961185,26961721-26961838,26961948-26962087
          Length = 417

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -3

Query: 209 GLYNRVCIEII*NKLVKKMVRKLI 138
           G    +CIE++ N+ ++KMVR L+
Sbjct: 338 GTTRAICIELVANRFLRKMVRVLV 361


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,634,641
Number of Sequences: 37544
Number of extensions: 190154
Number of successful extensions: 217
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 217
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)