Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0738
         (773 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2DNW5 Cluster: ABC transporter family protein; n=2; Tr...    37   0.64 
UniRef50_Q4Y5H5 Cluster: Putative uncharacterized protein; n=1; ...    34   4.5  
UniRef50_Q8I332 Cluster: Putative uncharacterized protein PFI058...    33   6.0  
UniRef50_Q7RGV7 Cluster: Putative uncharacterized protein PY0423...    33   6.0  
UniRef50_Q8MQJ7 Cluster: LD18893p; n=4; Drosophila|Rep: LD18893p...    33   7.9  

>UniRef50_A2DNW5 Cluster: ABC transporter family protein; n=2;
           Trichomonas vaginalis G3|Rep: ABC transporter family
           protein - Trichomonas vaginalis G3
          Length = 804

 Score = 36.7 bits (81), Expect = 0.64
 Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
 Frame = +2

Query: 545 SCHFIIPA-ISNVIYSWQ*ILNSNVFYIIKNGFLFYNSVIWLLTTIFFHYI--FIL 703
           S H II   I ++IY    ILN +V+  IKN +LFY+  I +L++IFF Y   FIL
Sbjct: 268 SVHMIIVVVIVHIIYH---ILNDHVYMAIKN-YLFYSIFITMLSSIFFMYFMGFIL 319


>UniRef50_Q4Y5H5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 72

 Score = 33.9 bits (74), Expect = 4.5
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = +2

Query: 620 YIIKNGFLFYNSVIWLLTTIFFHYIFILISFYMEYDKNTNSY 745
           Y+I+   ++Y ++ W ++ IF H+ FIL  FY+ +  N   Y
Sbjct: 25  YVIRI-LIYYCNLFWYISFIFIHHYFILFYFYIPFFYNCYLY 65


>UniRef50_Q8I332 Cluster: Putative uncharacterized protein PFI0585c;
           n=2; Plasmodium|Rep: Putative uncharacterized protein
           PFI0585c - Plasmodium falciparum (isolate 3D7)
          Length = 1568

 Score = 33.5 bits (73), Expect = 6.0
 Identities = 21/66 (31%), Positives = 33/66 (50%)
 Frame = +2

Query: 503 KNNLY*RLFSLHL*SCHFIIPAISNVIYSWQ*ILNSNVFYIIKNGFLFYNSVIWLLTTIF 682
           K N+Y  +F+L++     I   I N I++   +     +YII N  L  N+ I  L   +
Sbjct: 358 KKNMYVNIFNLYISYSTLIQNMIFNPIFN-NVLFKLKEYYIIINNLLLLNNSINFLKIKY 416

Query: 683 FHYIFI 700
           F Y+FI
Sbjct: 417 FFYMFI 422


>UniRef50_Q7RGV7 Cluster: Putative uncharacterized protein PY04239;
           n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY04239 - Plasmodium yoelii yoelii
          Length = 1192

 Score = 33.5 bits (73), Expect = 6.0
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +2

Query: 614 VFYIIKNGFLFYNSVIWLLTTIFFHYIFILISFYMEYDKNTNSYA 748
           + Y IK  F FY+S I+     F  Y  +L++ +  Y +N N++A
Sbjct: 624 ILYFIKLFFYFYDSQIYKEYEGFIFYYNLLVNLFFIYSENANNHA 668


>UniRef50_Q8MQJ7 Cluster: LD18893p; n=4; Drosophila|Rep: LD18893p -
           Drosophila melanogaster (Fruit fly)
          Length = 855

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 18/75 (24%), Positives = 40/75 (53%)
 Frame = +1

Query: 91  MSSRGQGNDTNDLKG*CMRQSFVLPPELKIIDSLHQLVETMSRSTNRSSPIKSPKLSLDT 270
           + S G G++ N+       ++F LP EL     LH L++T +         ++P+LS +T
Sbjct: 577 IGSAGSGSENNNQHHMLGPRAFTLP-ELGATGGLHSLLDTGAGGGGEPHAFQAPELSEET 635

Query: 271 ILNTQQS*TITLIQW 315
           +++ + + T++ + +
Sbjct: 636 LMDREHNETLSKLNF 650


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,398,041
Number of Sequences: 1657284
Number of extensions: 13086734
Number of successful extensions: 28561
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28532
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65027411410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)