Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0738
         (773 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.13 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    26   0.29 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   3.6  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   8.3  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   8.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +2

Query: 611 NVFYIIKNGFLFYNSVIWLLTTIFFHYIFILISFYM 718
           + F I     LFY  +I LL   +F+Y FIL + ++
Sbjct: 217 SAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHL 252



 Score = 25.4 bits (53), Expect = 0.51
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +2

Query: 638 FLFYNSVIWLLTTIFFHYIFILISFYM 718
           + FY + I LL   +F+Y FI+ + ++
Sbjct: 101 YYFYYAFIILLCVYYFYYAFIIFTVHL 127



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = +2

Query: 653 SVIWLLTTIFFHYIFILI 706
           +V +LL T +F+Y FI++
Sbjct: 93  TVHFLLCTYYFYYAFIIL 110


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -1

Query: 632 FLLCKIHLNLKFIASCKLRLKWPVL 558
           FLLC I +N+ FI   KL  +WP L
Sbjct: 400 FLLCSILVNIAFI---KLATEWPQL 421


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +2

Query: 650 NSVIWLLTTIFFHYIFILISFYMEYDKN 733
           N++++ +    F Y+FI++ F +   KN
Sbjct: 351 NALLFAICGSAFSYLFIMLQFDLNNKKN 378


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/31 (22%), Positives = 18/31 (58%)
 Frame = +2

Query: 557 IIPAISNVIYSWQ*ILNSNVFYIIKNGFLFY 649
           ++P +++ +Y     L+ N+ +++   F FY
Sbjct: 219 VLPNVNSTVYYDPRALSPNLEFVVLEAFDFY 249


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -3

Query: 159 NKGLPHTLTFEVVCIIPLSSAAHFCKESY 73
           N GL   + +  VC++PL+    F    Y
Sbjct: 10  NLGLNGLIDWYTVCLVPLNPYQFFLAVQY 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,638
Number of Sequences: 336
Number of extensions: 3979
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)