BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0738 (773 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_12333| Best HMM Match : Acyl_transf_3 (HMM E-Value=6) 29 3.2 SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2 SB_40492| Best HMM Match : PROCN (HMM E-Value=0) 29 5.5 SB_6869| Best HMM Match : Peptidase_A17 (HMM E-Value=2.8026e-45) 28 7.3 SB_47632| Best HMM Match : AAA_5 (HMM E-Value=0.00038) 28 7.3 SB_52116| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6 >SB_12333| Best HMM Match : Acyl_transf_3 (HMM E-Value=6) Length = 303 Score = 29.5 bits (63), Expect = 3.2 Identities = 13/41 (31%), Positives = 23/41 (56%) Frame = +2 Query: 599 ILNSNVFYIIKNGFLFYNSVIWLLTTIFFHYIFILISFYME 721 IL++++ Y I LFY +++L+ H+I SFY + Sbjct: 125 ILSASLVYFIGKPCLFYRQALFILSASLVHFIGKPCSFYRQ 165 >SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2342 Score = 29.5 bits (63), Expect = 3.2 Identities = 20/63 (31%), Positives = 25/63 (39%) Frame = +1 Query: 40 GTVAPPFKSGGITFFAEMSSRGQGNDTNDLKG*CMRQSFVLPPELKIIDSLHQLVETMSR 219 G A PF G + M N T D G + FV+ PE ID L + V + Sbjct: 1732 GPAARPFPRGKFDYIVHMCPTFVYNKTYDGFGEGDNRLFVIAPEAGRIDMLLRFVSALFE 1791 Query: 220 STN 228 TN Sbjct: 1792 GTN 1794 >SB_40492| Best HMM Match : PROCN (HMM E-Value=0) Length = 1784 Score = 28.7 bits (61), Expect = 5.5 Identities = 10/44 (22%), Positives = 21/44 (47%) Frame = +2 Query: 551 HFIIPAISNVIYSWQ*ILNSNVFYIIKNGFLFYNSVIWLLTTIF 682 H ++ + N+ W+ I + V Y I F N + W++ ++ Sbjct: 83 HAVLKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWVVEPVY 126 >SB_6869| Best HMM Match : Peptidase_A17 (HMM E-Value=2.8026e-45) Length = 811 Score = 28.3 bits (60), Expect = 7.3 Identities = 19/62 (30%), Positives = 28/62 (45%) Frame = +1 Query: 52 PPFKSGGITFFAEMSSRGQGNDTNDLKG*CMRQSFVLPPELKIIDSLHQLVETMSRSTNR 231 PPF G+ +FA SR +G D+ R++ L + D H L+ M+ T R Sbjct: 565 PPFTYVGVDYFAPWRSRSEGQGLRDVPRMLPRKTDTLRMPAR-EDIEHPLIRKMTLMTCR 623 Query: 232 SS 237 S Sbjct: 624 VS 625 >SB_47632| Best HMM Match : AAA_5 (HMM E-Value=0.00038) Length = 1172 Score = 28.3 bits (60), Expect = 7.3 Identities = 16/53 (30%), Positives = 27/53 (50%) Frame = +3 Query: 315 ESEVVKYLIEFRQECFYGAFFFKDCKCTYI*IFCKVFSSVFVSIHNKTYFLRS 473 +S+++K+L E + CF F D K FC V +V + + +K + L S Sbjct: 187 KSQMLKHLFEELEICFKSLMGFLDSKRKVFPRFCFVTDAVLLGMLSKPHNLES 239 >SB_52116| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1084 Score = 27.9 bits (59), Expect = 9.6 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -3 Query: 216 THSFNQLVQTIDYLEFWGQNK-GLPHTLTFEVVCIIP 109 THSF +L+Q + G+NK G+ T T+ +IP Sbjct: 388 THSFKRLIQHQREAKLLGKNKQGIERTATYSSKTLIP 424 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,898,108 Number of Sequences: 59808 Number of extensions: 391412 Number of successful extensions: 838 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 737 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 837 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2107953584 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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