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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0738
         (773 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_12333| Best HMM Match : Acyl_transf_3 (HMM E-Value=6)               29   3.2  
SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.2  
SB_40492| Best HMM Match : PROCN (HMM E-Value=0)                       29   5.5  
SB_6869| Best HMM Match : Peptidase_A17 (HMM E-Value=2.8026e-45)       28   7.3  
SB_47632| Best HMM Match : AAA_5 (HMM E-Value=0.00038)                 28   7.3  
SB_52116| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.6  

>SB_12333| Best HMM Match : Acyl_transf_3 (HMM E-Value=6)
          Length = 303

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +2

Query: 599 ILNSNVFYIIKNGFLFYNSVIWLLTTIFFHYIFILISFYME 721
           IL++++ Y I    LFY   +++L+    H+I    SFY +
Sbjct: 125 ILSASLVYFIGKPCLFYRQALFILSASLVHFIGKPCSFYRQ 165


>SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2342

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 20/63 (31%), Positives = 25/63 (39%)
 Frame = +1

Query: 40   GTVAPPFKSGGITFFAEMSSRGQGNDTNDLKG*CMRQSFVLPPELKIIDSLHQLVETMSR 219
            G  A PF  G   +   M      N T D  G    + FV+ PE   ID L + V  +  
Sbjct: 1732 GPAARPFPRGKFDYIVHMCPTFVYNKTYDGFGEGDNRLFVIAPEAGRIDMLLRFVSALFE 1791

Query: 220  STN 228
             TN
Sbjct: 1792 GTN 1794


>SB_40492| Best HMM Match : PROCN (HMM E-Value=0)
          Length = 1784

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 10/44 (22%), Positives = 21/44 (47%)
 Frame = +2

Query: 551 HFIIPAISNVIYSWQ*ILNSNVFYIIKNGFLFYNSVIWLLTTIF 682
           H ++  + N+   W+ I +  V Y I     F N + W++  ++
Sbjct: 83  HAVLKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWVVEPVY 126


>SB_6869| Best HMM Match : Peptidase_A17 (HMM E-Value=2.8026e-45)
          Length = 811

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +1

Query: 52  PPFKSGGITFFAEMSSRGQGNDTNDLKG*CMRQSFVLPPELKIIDSLHQLVETMSRSTNR 231
           PPF   G+ +FA   SR +G    D+     R++  L    +  D  H L+  M+  T R
Sbjct: 565 PPFTYVGVDYFAPWRSRSEGQGLRDVPRMLPRKTDTLRMPAR-EDIEHPLIRKMTLMTCR 623

Query: 232 SS 237
            S
Sbjct: 624 VS 625


>SB_47632| Best HMM Match : AAA_5 (HMM E-Value=0.00038)
          Length = 1172

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +3

Query: 315 ESEVVKYLIEFRQECFYGAFFFKDCKCTYI*IFCKVFSSVFVSIHNKTYFLRS 473
           +S+++K+L E  + CF     F D K      FC V  +V + + +K + L S
Sbjct: 187 KSQMLKHLFEELEICFKSLMGFLDSKRKVFPRFCFVTDAVLLGMLSKPHNLES 239


>SB_52116| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1084

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -3

Query: 216 THSFNQLVQTIDYLEFWGQNK-GLPHTLTFEVVCIIP 109
           THSF +L+Q     +  G+NK G+  T T+    +IP
Sbjct: 388 THSFKRLIQHQREAKLLGKNKQGIERTATYSSKTLIP 424


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,898,108
Number of Sequences: 59808
Number of extensions: 391412
Number of successful extensions: 838
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2107953584
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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