Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0734
         (436 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000023DDC9 Cluster: hypothetical protein FG04622.1; ...    32   4.6  
UniRef50_Q7VPN3 Cluster: Possible transport system permease prot...    32   6.0  
UniRef50_Q4SKA1 Cluster: Chromosome 13 SCAF14566, whole genome s...    31   8.0  
UniRef50_A6TNV6 Cluster: GCN5-related N-acetyltransferase; n=3; ...    31   8.0  
UniRef50_Q8TSG0 Cluster: Transposase; n=1; Methanosarcina acetiv...    31   8.0  

>UniRef50_UPI000023DDC9 Cluster: hypothetical protein FG04622.1; n=1;
            Gibberella zeae PH-1|Rep: hypothetical protein FG04622.1
            - Gibberella zeae PH-1
          Length = 1207

 Score = 32.3 bits (70), Expect = 4.6
 Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
 Frame = -3

Query: 230  WICFHIQPIQFSFNVHGYY---RVFS--VTTEINYAFAIIKALRFVTGSRRVFR 84
            W CF I  +  +FN+H Y+   RV S  +  EI   F  I+A+  V GSR + R
Sbjct: 998  WRCFLIHQLDRNFNLHEYHFPQRVISKELLGEIIVLFLKIRAIAEVPGSRYLLR 1051


>UniRef50_Q7VPN3 Cluster: Possible transport system permease
           protein; n=5; Pasteurellaceae|Rep: Possible transport
           system permease protein - Haemophilus ducreyi
          Length = 354

 Score = 31.9 bits (69), Expect = 6.0
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -3

Query: 269 IKCIHFGKSLDLFWICFHIQPIQFSFNVHGYYRVFSVTTEINYAFAIIKAL 117
           I  I F +   L W+CF I+   F   V  +Y++ +  T + + F  IK +
Sbjct: 149 IPFIKFDQIALLIWVCFAIEASLFVLMVKPFYQIQTAQTLVKFRFGQIKQI 199


>UniRef50_Q4SKA1 Cluster: Chromosome 13 SCAF14566, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 13 SCAF14566, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 263

 Score = 31.5 bits (68), Expect = 8.0
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -2

Query: 252 WKITRLILDMFPYPTHSILI*CSRLLPSVFCHDRNKLCVCNYK 124
           WK++ LI    P+P  S++    R  P   CH R++ C C Y+
Sbjct: 55  WKLSLLIRGTNPFPISSVI--SGRRRP---CHMRSRSCACRYR 92


>UniRef50_A6TNV6 Cluster: GCN5-related N-acetyltransferase; n=3;
           Firmicutes|Rep: GCN5-related N-acetyltransferase -
           Alkaliphilus metalliredigens QYMF
          Length = 168

 Score = 31.5 bits (68), Expect = 8.0
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -1

Query: 349 E*RHATIESKAKNKLSMVPCRASSVSTLNVFILEN-HSTYSGYVSISNPFNSHLMFTVIT 173
           E R AT+E+K K++  M+P          V  +EN      G+ S+ NPFNS   +  + 
Sbjct: 25  EDRIATLETKIKSEAEMIPWLQQRSEKHKVITIENERDEVLGWASL-NPFNSRCCYDGVA 83

Query: 172 E 170
           +
Sbjct: 84  D 84


>UniRef50_Q8TSG0 Cluster: Transposase; n=1; Methanosarcina
           acetivorans|Rep: Transposase - Methanosarcina
           acetivorans
          Length = 242

 Score = 31.5 bits (68), Expect = 8.0
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +3

Query: 225 YPE*VE*FSKMNTFNVDTELARHGTIDSLFLAFDSIVA*RYSNKFDVSRHLSMFKLVKEY 404
           YP+ +    K      D E  RHGT+ SLF   D I    Y   F+  R     +++KE 
Sbjct: 74  YPDVMPTEGKYPMMARDYEYIRHGTL-SLFACIDLITGKVYHKVFEKGRSREFIEIIKEI 132

Query: 405 IT 410
           ++
Sbjct: 133 VS 134


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 394,724,084
Number of Sequences: 1657284
Number of extensions: 7344677
Number of successful extensions: 14975
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14968
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21496989549
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)