Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0734
         (436 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    25   0.88 
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    25   0.88 
AF515526-1|AAM61893.1|  229|Anopheles gambiae glutathione S-tran...    25   0.88 
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   4.7  
AY146757-1|AAO12072.1|  246|Anopheles gambiae odorant-binding pr...    23   4.7  
AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding pr...    23   4.7  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       23   6.2  

>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 25.4 bits (53), Expect = 0.88
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -1

Query: 301 MVPCRASSVSTLNVFILENHSTYSGYVSISNPFNSHLMFTVITE 170
           ++PC   S  T+  F L + S     +SIS   + H+ F ++ E
Sbjct: 251 IIPCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVE 294


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 25.4 bits (53), Expect = 0.88
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -1

Query: 301 MVPCRASSVSTLNVFILENHSTYSGYVSISNPFNSHLMFTVITE 170
           ++PC   S  T+  F L + S     +SIS   + H+ F ++ E
Sbjct: 251 IIPCMGISFLTVLTFYLPSDSGEKVTLSISILISLHVFFLLVVE 294


>AF515526-1|AAM61893.1|  229|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 229

 Score = 25.4 bits (53), Expect = 0.88
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = -1

Query: 394 TNLNMLRCLETSNLFE*RHATIESKAKNKLSMVPCRASS 278
           T L   +CL   NL +  H T E KA N+   VPC   S
Sbjct: 26  TKLPYEKCL--INLGKGEHLTEEFKAINRFQKVPCITDS 62


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -1

Query: 301 MVPCRASSVSTLNVFILENHSTYSGYVSISNPFNSHLMFTVITE 170
           ++PC   S  T+ VF L + S     +SIS   +  + F ++ E
Sbjct: 247 IIPCMGISFLTILVFYLPSDSGEKVSLSISILLSLTVFFLLLAE 290


>AY146757-1|AAO12072.1|  246|Anopheles gambiae odorant-binding
           protein AgamOBP39 protein.
          Length = 246

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 171 SVFCHDRNKLCVCNYKGITVCYWE 100
           SV+  D++ +C+    GI V +W+
Sbjct: 61  SVYPTDQDTMCMVRCAGIMVGFWD 84


>AJ618928-1|CAF02007.1|  285|Anopheles gambiae odorant-binding
           protein OBPjj83a protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 171 SVFCHDRNKLCVCNYKGITVCYWE 100
           SV+  D++ +C+    GI V +W+
Sbjct: 61  SVYPTDQDTMCMVRCAGIMVGFWD 84


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 9/36 (25%), Positives = 17/36 (47%)
 Frame = -2

Query: 216 YPTHSILI*CSRLLPSVFCHDRNKLCVCNYKGITVC 109
           YP  S+L    ++    FC + N+   C+ + +  C
Sbjct: 477 YPPFSLLTQPEKIRDDTFCDEDNRPDSCSDRQLCTC 512


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 438,033
Number of Sequences: 2352
Number of extensions: 8204
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36142935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)