Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0731
(717 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 32 0.020
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 29 0.19
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 26 1.3
AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein p... 26 1.3
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 25 2.3
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 25 3.1
AY578800-1|AAT07305.1| 379|Anopheles gambiae decapentaplegic pr... 24 4.1
AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein p... 24 4.1
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 23 9.5
AF080564-1|AAC31944.1| 372|Anopheles gambiae Sex combs reduced ... 23 9.5
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 31.9 bits (69), Expect = 0.020
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 39 TPRASTAWPGARTLSASLRARSTPPSSSGALTSHPSTRSLRMP 167
+PR+ WP R+ A R+RST P+S S P+++ R+P
Sbjct: 261 SPRSGGRWPSCRSPPARRRSRSTRPTSWP--RSRPTSKPKRLP 301
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 28.7 bits (61), Expect = 0.19
Identities = 18/74 (24%), Positives = 30/74 (40%)
Frame = +2
Query: 44 ARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVS 223
A + C W+PD ++V G+ IIV V + + IT + W ++ +
Sbjct: 150 ATITCGIWTPDDQQVYFGTTQGQIIVMDVHGAMVSQVPLGS--DVGITAMAWSCEKFKME 207
Query: 224 TGQDANTRVWTVPK 265
G+D V K
Sbjct: 208 EGEDTEPGVTNASK 221
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 25.8 bits (54), Expect = 1.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 120 SGALTSHPSTRSLRMPIPKV 179
+ AL SHP RS +PIP++
Sbjct: 419 TSALPSHPRRRSNSLPIPQI 438
>AB090816-1|BAC57907.1| 455|Anopheles gambiae gag-like protein
protein.
Length = 455
Score = 25.8 bits (54), Expect = 1.3
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 80 KRVASGS-LDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTGQDANTR 247
K+ A+G+ L ++ + + Q + T KN Q Q+T L W+ +E + +DA R
Sbjct: 24 KKSATGTNLPSSPEMLILRQNLEETRKKNESLQEQLTQLRWLMEEKLREQREDAQRR 80
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 25.0 bits (52), Expect = 2.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = -3
Query: 154 DRVLGWLVNAPDDDGGVERARSDALRVRAPGHAVDA 47
D V+G VN G+ER +D RV G +DA
Sbjct: 118 DTVIGGYVNVWSGAWGMERRPNDGERVSRGGVVMDA 153
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 24.6 bits (51), Expect = 3.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 624 LLIAESPRCHPRLLSYRG*RRE 559
LL+ E RCH RLL+ G R+
Sbjct: 848 LLVREDARCHRRLLAAPGASRK 869
>AY578800-1|AAT07305.1| 379|Anopheles gambiae decapentaplegic
protein.
Length = 379
Score = 24.2 bits (50), Expect = 4.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 370 STLQTDTPILFICIDYDYVRPKLEHYR 290
S Q TP+L+ + YD VRP ++ R
Sbjct: 120 SRAQARTPVLYQVMVYDIVRPGVKGKR 146
>AB090819-1|BAC57913.1| 400|Anopheles gambiae gag-like protein
protein.
Length = 400
Score = 24.2 bits (50), Expect = 4.1
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = +3
Query: 15 PTTRSGASTPRASTAWPGARTLSASLRARSTPPSSSGALTSHPSTRSLRMPIPK 176
P TR G A AR SA R TP SSG + P + + +PK
Sbjct: 120 PQTRKGRVPKEARKRDNNARQRSAQ---RETP-KSSGGQSKQPKKKKKKRSLPK 169
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
TPR-containing phosphoprotein protein.
Length = 1200
Score = 23.0 bits (47), Expect = 9.5
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +2
Query: 68 SPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGL 193
+PD++ + G+L + W++ Q + TI+KN S L
Sbjct: 563 NPDTRSLL-GNLHLAKMQWTLGQKNFETILKNPATSSDAYSL 603
>AF080564-1|AAC31944.1| 372|Anopheles gambiae Sex combs reduced
homeotic protein protein.
Length = 372
Score = 23.0 bits (47), Expect = 9.5
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +2
Query: 68 SPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQIT 187
S + V G T ++ ++ QP K + + PQS +T
Sbjct: 83 SASTGAVGGGHQSTDMVDYTQLQPQKFLLSQQQQPQSALT 122
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 700,778
Number of Sequences: 2352
Number of extensions: 13357
Number of successful extensions: 42
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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