Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0731
(717 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 83 2e-16
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 82 3e-16
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 50 2e-06
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 48 5e-06
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 47 1e-05
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 47 1e-05
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 46 3e-05
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 46 3e-05
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 46 3e-05
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 45 4e-05
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 44 8e-05
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 44 8e-05
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 44 1e-04
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 44 1e-04
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 43 2e-04
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 43 2e-04
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 42 3e-04
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 42 4e-04
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 41 7e-04
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 41 0.001
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 40 0.001
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 40 0.001
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 40 0.001
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 40 0.002
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 40 0.002
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 39 0.003
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 38 0.005
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 38 0.005
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 38 0.007
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 38 0.007
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 38 0.009
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 38 0.009
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 38 0.009
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 38 0.009
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 37 0.012
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 37 0.015
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 37 0.015
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 37 0.015
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 37 0.015
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 37 0.015
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 36 0.020
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 36 0.020
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 36 0.027
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 36 0.027
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 36 0.027
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 36 0.027
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 36 0.035
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 36 0.035
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 36 0.035
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 35 0.047
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 35 0.047
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 35 0.047
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 35 0.047
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 35 0.062
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 35 0.062
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 35 0.062
At2g31300.1 68415.m03821 transducin family protein / WD-40 repea... 35 0.062
At2g30910.2 68415.m03768 transducin family protein / WD-40 repea... 35 0.062
At2g30910.1 68415.m03767 transducin family protein / WD-40 repea... 35 0.062
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 35 0.062
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 34 0.082
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 34 0.082
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 34 0.11
At5g28350.2 68418.m03443 expressed protein 34 0.11
At5g28350.1 68418.m03442 expressed protein 34 0.11
At3g61480.1 68416.m06885 expressed protein 34 0.11
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 34 0.11
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 34 0.11
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 33 0.14
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 33 0.14
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 33 0.14
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 33 0.14
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 33 0.14
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 33 0.14
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 33 0.14
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 33 0.19
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 33 0.19
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 33 0.19
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 33 0.19
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 33 0.19
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 33 0.19
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 33 0.19
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 33 0.25
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 33 0.25
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 33 0.25
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 33 0.25
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 33 0.25
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 32 0.33
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 32 0.33
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 32 0.33
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 32 0.33
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 32 0.33
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 32 0.33
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 32 0.33
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 32 0.33
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 32 0.33
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 32 0.44
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 32 0.44
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 31 0.58
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 31 0.58
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 31 0.58
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 31 0.58
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 31 0.58
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 31 0.58
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 31 0.58
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 31 0.76
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 31 0.76
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 31 0.76
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 31 0.76
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 31 0.76
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 31 1.0
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 31 1.0
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 31 1.0
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 31 1.0
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 31 1.0
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 31 1.0
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 31 1.0
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 31 1.0
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 31 1.0
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 31 1.0
At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p pro... 30 1.3
At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p pro... 30 1.3
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 30 1.3
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 30 1.3
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 30 1.3
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 30 1.3
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 30 1.3
At2g40070.1 68415.m04923 expressed protein 30 1.3
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 30 1.3
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 30 1.3
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 30 1.8
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 30 1.8
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 30 1.8
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 30 1.8
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 30 1.8
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 29 2.3
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 29 2.3
At5g01280.1 68418.m00037 expressed protein 29 2.3
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 29 2.3
At4g24450.1 68417.m03505 starch excess protein-related similar t... 29 2.3
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 29 2.3
At3g09000.1 68416.m01053 proline-rich family protein 29 2.3
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 29 2.3
At2g38020.1 68415.m04667 vacuoleless1 (VCL1) contains Pfam profi... 29 2.3
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 29 2.3
At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pf... 29 3.1
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 29 3.1
At4g08540.1 68417.m01405 expressed protein 29 3.1
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 29 3.1
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 29 3.1
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 29 3.1
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 29 3.1
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 29 3.1
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 29 3.1
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 29 3.1
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 29 3.1
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 29 3.1
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 29 4.1
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 29 4.1
At4g08670.1 68417.m01428 protease inhibitor/seed storage/lipid t... 28 5.4
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 28 5.4
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 28 5.4
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 28 5.4
At3g26740.1 68416.m03343 light responsive protein-related simila... 28 5.4
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 28 5.4
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 28 5.4
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 28 5.4
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 28 7.1
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 28 7.1
At3g10650.1 68416.m01281 expressed protein 28 7.1
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 28 7.1
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 28 7.1
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 28 7.1
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 28 7.1
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 27 9.4
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 27 9.4
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 27 9.4
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 27 9.4
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 27 9.4
At1g31290.1 68414.m03829 PAZ domain-containing protein / piwi do... 27 9.4
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 27 9.4
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 83.0 bits (196), Expect = 2e-16
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 1/75 (1%)
Frame = +2
Query: 35 FHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQP-SKHTIIKNAHPQSQITGLTWIDDE 211
+H+AR+NC+AWSP+S VA+GSLDT +IV+ VD+P S IK AH + GL + DD
Sbjct: 532 YHSARINCLAWSPNSTMVATGSLDTCVIVYEVDKPASSRMTIKGAH-LGGVYGLGFADDS 590
Query: 212 TIVSTGQDANTRVWT 256
+VS+G+DA RVW+
Sbjct: 591 HVVSSGEDACIRVWS 605
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKN-AHPQSQITGLTWIDDET 214
H ++ + +SPD AS L+ +VW D+ S+ +KN + ++I L W + T
Sbjct: 490 HRGAISVIRYSPDLSMFASADLNREAVVW--DRVSREMKLKNMLYHSARINCLAWSPNST 547
Query: 215 IVSTGQ-DANTRVWTVPK 265
+V+TG D V+ V K
Sbjct: 548 MVATGSLDTCVIVYEVDK 565
Score = 31.9 bits (69), Expect = 0.44
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV 130
H + V+WSPD K+V + S D + +W +
Sbjct: 231 HKGSIYAVSWSPDGKQVLTVSADKSAKIWDI 261
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 82.2 bits (194), Expect = 3e-16
Identities = 36/76 (47%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Frame = +2
Query: 35 FHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTI-IKNAHPQSQITGLTWIDDE 211
FHTAR+N +AWSP++K VA+GS+DT +IV+ VD+P+ I +NAH + + +IDD
Sbjct: 397 FHTARINSLAWSPNNKMVATGSIDTCVIVYEVDKPASSRITARNAH-LGGVNAVAFIDDC 455
Query: 212 TIVSTGQDANTRVWTV 259
T+ S+G+DA+ R+W +
Sbjct: 456 TVASSGEDASVRLWHI 471
Score = 37.1 bits (82), Expect = 0.012
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV-DQPSKHTIIK------NAHPQSQITGLT 196
H + V+WSPDSKRV + S D + VW V + + ++IK + + + G
Sbjct: 95 HKGSIYAVSWSPDSKRVLTVSADKSAKVWEVAEDGTIGSVIKTLSFMESGGAEDMLVGCL 154
Query: 197 WIDDETI-VSTG 229
W +D I VS G
Sbjct: 155 WQNDHLITVSLG 166
Score = 34.7 bits (76), Expect = 0.062
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKN-AHPQSQITGLTWIDDET 214
H + + +SPD ASG + +VW D+ +K + N ++I L W +
Sbjct: 355 HRGALTVIRYSPDLTMFASGDANREAVVW--DRETKQVKLNNMLFHTARINSLAWSPNNK 412
Query: 215 IVSTGQ-DANTRVWTVPK 265
+V+TG D V+ V K
Sbjct: 413 MVATGSIDTCVIVYEVDK 430
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/77 (23%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSK--HTIIKNAHPQSQITGLTWI-DD 208
H+ VNC+ +SPD + + S D +++ K ++ H + I ++W D
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGH-KGSIYAVSWSPDS 108
Query: 209 ETIVSTGQDANTRVWTV 259
+ +++ D + +VW V
Sbjct: 109 KRVLTVSADKSAKVWEV 125
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 16/90 (17%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPS---KHT-------IIKNAHPQS--- 178
HT+ V AWSP + +ASGS D T +WS+ + S HT I+K+A +S
Sbjct: 264 HTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKSNEK 323
Query: 179 --QITGLTWIDDETIVSTGQ-DANTRVWTV 259
+T L W + T+++TG D R+WT+
Sbjct: 324 SKDVTTLDWNGEGTLLATGSCDGQARIWTL 353
Score = 36.3 bits (80), Expect = 0.020
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQ 136
H VNCV W P +AS S D+T +W++ Q
Sbjct: 447 HQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQ 479
Score = 34.7 bits (76), Expect = 0.062
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQ 136
H V +A+SP+ + +ASGSLD +I +WS+ +
Sbjct: 540 HREPVYSLAFSPNGEYIASGSLDKSIHIWSIKE 572
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 48.4 bits (110), Expect = 5e-06
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Frame = +2
Query: 5 FKLAHNKEWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKN----AHP 172
FK H++E+ H +V+ VAW+ + ++ASGS+D T +W++ +P H+ K+ H
Sbjct: 8 FKSLHSREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNI-EPHGHSKAKDLELKGHT 66
Query: 173 QSQITGLTW--IDDETIVSTGQDANTRVW 253
S + L W + + + D + R+W
Sbjct: 67 DS-VDQLCWDPKHSDLVATASGDKSVRLW 94
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV 130
HTA C+A P + A GS D+ + +W +
Sbjct: 190 HTAGCYCIAIDPKGRYFAVGSADSLVSLWDI 220
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +2
Query: 17 HNKEWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLT 196
H K HTA ++CV +S D +AS S+D T+I+WS S I + S I+ L
Sbjct: 35 HLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYS--LIHRYEGHSSGISDLA 92
Query: 197 WIDDETIV-STGQDANTRVW 253
W D S D R+W
Sbjct: 93 WSSDSHYTCSASDDCTLRIW 112
Score = 41.5 bits (93), Expect = 5e-04
Identities = 25/72 (34%), Positives = 34/72 (47%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
HT V CV ++P S + SGS D TI +W V +IK AH + D I
Sbjct: 127 HTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIK-AHSMPISSVHFNRDGSLI 185
Query: 218 VSTGQDANTRVW 253
VS D + ++W
Sbjct: 186 VSASHDGSCKIW 197
Score = 36.3 bits (80), Expect = 0.020
Identities = 23/85 (27%), Positives = 34/85 (40%)
Frame = +2
Query: 5 FKLAHNKEWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQI 184
+ L H E H++ ++ +AWS DS S S D T+ +W P + + H
Sbjct: 75 YSLIHRYEG--HSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVF 132
Query: 185 TGLTWIDDETIVSTGQDANTRVWTV 259
IVS D R+W V
Sbjct: 133 CVNFNPPSNLIVSGSFDETIRIWEV 157
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWID-DET 214
HTA V + WSPD +ASGSLD T+ +W++ + T + H S + G+TW
Sbjct: 117 HTADVVDLNWSPDDSMLASGSLDNTVHIWNM-RTGMCTTVLRGH-LSLVKGVTWDPIGSF 174
Query: 215 IVSTGQDANTRVW 253
I S D +W
Sbjct: 175 IASQSDDKTVIIW 187
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTI 115
H VNCV W+ +S+ VASGS D I
Sbjct: 58 HFGSVNCVRWAKNSRYVASGSDDQVI 83
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 NKEWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTW 199
+K FH V + WSPD + SGS+D + I+W V++ S H I+ +AH + G+ W
Sbjct: 46 HKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQIL-DAHCH-YVQGVAW 103
Query: 200 ID-DETIVSTGQDANTRVW 253
+ + S D R++
Sbjct: 104 DPLAKYVASLSSDRTCRIY 122
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 NKEWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTW 199
+K FH V + WSPD + SGS+D + I+W V++ S H I+ +AH + G+ W
Sbjct: 105 HKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQIL-DAHCH-YVQGVAW 162
Query: 200 ID-DETIVSTGQDANTRVW 253
+ + S D R++
Sbjct: 163 DPLAKYVASLSSDRTCRIY 181
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Frame = +2
Query: 35 FHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHP-----QSQITGLTW 199
+H VN + +SP + +ASG+ + +W + PS+ H + + L W
Sbjct: 62 YHGCAVNTIRFSPSGELLASGADGGELFIWKL-HPSETNQSWKVHKSLSFHRKDVLDLQW 120
Query: 200 I-DDETIVSTGQDANTRVWTVPK 265
DD ++S D + +W V K
Sbjct: 121 SPDDAYLISGSVDNSCIIWDVNK 143
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 20 NKEWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTW 199
+K FH V + WSPD + SGS+D + I+W V++ S H I+ +AH + G+ W
Sbjct: 105 HKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQIL-DAHCH-YVQGVAW 162
Query: 200 ID-DETIVSTGQDANTRVW 253
+ + S D R++
Sbjct: 163 DPLAKYVASLSSDRTCRIY 181
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 6/83 (7%)
Frame = +2
Query: 35 FHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHP-----QSQITGLTW 199
+H VN + +SP + +ASG+ + +W + PS+ H + + L W
Sbjct: 62 YHGCAVNTIRFSPSGELLASGADGGELFIWKL-HPSETNQSWKVHKSLSFHRKDVLDLQW 120
Query: 200 I-DDETIVSTGQDANTRVWTVPK 265
DD ++S D + +W V K
Sbjct: 121 SPDDAYLISGSVDNSCIIWDVNK 143
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 38 HTARVNCVAWSPDS-KRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTW-IDDE 211
H V+C+A +P+ K + S S+D I +W + S+ T+ + Q + GLT D
Sbjct: 55 HRDGVSCMAKNPNYLKGIFSASMDGDIRLWDIS--SRRTVCQFPGHQGAVRGLTASTDGN 112
Query: 212 TIVSTGQDANTRVWTVPK 265
+VS G D R+W VP+
Sbjct: 113 VLVSCGTDCTVRLWNVPR 130
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +2
Query: 17 HNKEWGFHTARVN---CVAWSPDSKRVASGSLDTTIIVW 124
H++E +HT R+ CV +S D+ V SGS DT + +W
Sbjct: 312 HSREI-YHTKRMQRVFCVKYSCDATYVISGSDDTNLRLW 349
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 44.4 bits (100), Expect = 8e-05
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Frame = +2
Query: 38 HTARVNCVAWSPDSK-----RVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWI 202
HT+ V +AW P + R+ SGS+DT + VW++ +K H Q Q+TG+ I
Sbjct: 65 HTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLK-GH-QMQVTGVA-I 121
Query: 203 DDETIVSTGQDANTRVW 253
D+E IVS+ D + W
Sbjct: 122 DNEDIVSSSVDQTLKRW 138
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 44.4 bits (100), Expect = 8e-05
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Frame = +2
Query: 38 HTARVNCVAWSPDSK-----RVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWI 202
HT+ V +AW P + R+ SGS+DT + VW++ +K H Q Q+TG+ I
Sbjct: 65 HTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLK-GH-QMQVTGVA-I 121
Query: 203 DDETIVSTGQDANTRVW 253
D+E IVS+ D + W
Sbjct: 122 DNEDIVSSSVDQTLKRW 138
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWI-DDET 214
H VNCV +SPDS+ +A+G+ D + VW+V S I + +T L ++ D+ +
Sbjct: 348 HYFDVNCVTYSPDSQLLATGADDNKVKVWNV--MSGTCFITFTEHTNAVTALHFMADNHS 405
Query: 215 IVSTGQDANTRVW 253
++S D R W
Sbjct: 406 LLSASLDGTVRAW 418
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
H A V+ + +SP ++ +AS S D T+ +W V SK T+ H +T D + +
Sbjct: 476 HEAPVHGLMFSPLTQLLASSSWDYTVRLWDV-FASKGTVETFRHNHDVLTVAFRPDGKQL 534
Query: 218 VSTGQDANTRVW 253
S+ D W
Sbjct: 535 ASSTLDGQINFW 546
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWI-DDET 214
H VNCV +SPDS+ +A+G+ D + VW+V S I + +T L ++ D+ +
Sbjct: 388 HYFDVNCVTYSPDSQLLATGADDNKVKVWNV--MSGTCFITFTEHTNAVTALHFMADNHS 445
Query: 215 IVSTGQDANTRVW 253
++S D R W
Sbjct: 446 LLSASLDGTVRAW 458
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/72 (29%), Positives = 34/72 (47%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
H A V+ + +SP ++ +AS S D T+ +W V SK T+ H +T D + +
Sbjct: 516 HEAPVHGLMFSPLTQLLASSSWDYTVRLWDV-FASKGTVETFRHNHDVLTVAFRPDGKQL 574
Query: 218 VSTGQDANTRVW 253
S+ D W
Sbjct: 575 ASSTLDGQINFW 586
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTW--IDDE 211
HTA + + +SP R+A+ S D T+ VW D H S +T L + I D+
Sbjct: 692 HTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGH-SSMVTSLDFHPIKDD 750
Query: 212 TIVSTGQDANTRVWTV 259
I S D R W++
Sbjct: 751 LICSCDNDNEIRYWSI 766
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 41 TARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIV 220
T +V C +S D K +AS D ++W D T ++ H + IT + + + +
Sbjct: 651 TTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEE-H-TAMITDIRFSPSQLRL 708
Query: 221 STGQ-DANTRVW 253
+T D RVW
Sbjct: 709 ATSSFDKTVRVW 720
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRV---ASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDD 208
HT V CV +SP S + A+G +D +I+W + + I ++ + +T LTWI
Sbjct: 283 HTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFICEH---EEGVTSLTWIGT 339
Query: 209 ETIVSTG-QDANTRVW 253
++TG + +W
Sbjct: 340 SKYLATGCANGTVSIW 355
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +2
Query: 8 KLAHNKEWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQIT 187
K A+ + H V C ++PD K + +GS D ++IVW+ I+K HP
Sbjct: 186 KEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVK-GHPY-HTE 243
Query: 188 GLTWID 205
GLT +D
Sbjct: 244 GLTCLD 249
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
H V+C+A+S D + +ASG LD + ++ + ++ P + I + W I
Sbjct: 112 HKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDG--PGAGIEWVRWHPRGHI 169
Query: 218 VSTG-QDANTRVWTVPK 265
V G +D + +W K
Sbjct: 170 VLAGSEDCSLWMWNADK 186
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDD-ET 214
H + V + ++P +ASGS D I +W V K+ ++ H ++ I L W D
Sbjct: 52 HPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGH-KNAILDLHWTSDGSQ 110
Query: 215 IVSTGQDANTRVWTV 259
IVS D R W V
Sbjct: 111 IVSASPDKTVRAWDV 125
Score = 34.7 bits (76), Expect = 0.062
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +2
Query: 8 KLAHNKEWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQIT 187
K+ + F + C +WSPD +V +GS D + +W D S+ TI K +
Sbjct: 262 KIFEGHQHNFEKNLLKC-SWSPDGTKVTAGSSDRMVHIW--DTTSRRTIYKLPGHTGSVN 318
Query: 188 GLTWIDDETIV-STGQDAN 241
+ E I+ S D N
Sbjct: 319 ECVFHPTEPIIGSCSSDKN 337
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +2
Query: 68 SPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDE--TIVSTGQDAN 241
SPD + V SGS D +W V++P II H ++T + W E + + D
Sbjct: 347 SPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGH-DFEVTAVDWSPSEIGKVATASDDFT 405
Query: 242 TRVWTV 259
R+W +
Sbjct: 406 VRLWNI 411
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 41.1 bits (92), Expect = 7e-04
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV-DQPSKHTIIKNAHPQSQITGLTWI-DDE 211
H V V+WS DS+ + SGS D+T+ +W + + K + +A ++ + W D E
Sbjct: 401 HVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHA---DEVFAVDWSPDGE 457
Query: 212 TIVSTGQDANTRVW 253
+VS G+D ++W
Sbjct: 458 KVVSGGKDRVLKLW 471
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV 130
H V CV++SPD K++ASGS DTT+ +W +
Sbjct: 108 HAEAVLCVSFSPDGKQLASGSGDTTVRLWDL 138
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTW------ 199
H V VAWSPD K + SGS I W+ + H + ITG++W
Sbjct: 150 HKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGH-KKWITGISWEPVHLS 208
Query: 200 IDDETIVSTGQDANTRVWTV 259
V++ +D + R+W +
Sbjct: 209 SPCRRFVTSSKDGDARIWDI 228
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIK-NAHPQSQITGLTW-IDDE 211
H VN V +SPD K +AS S D ++ +W+ T+ + + P Q+ +W D
Sbjct: 359 HQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQV---SWSADSR 415
Query: 212 TIVSTGQDANTRVWTV 259
++S +D+ ++W +
Sbjct: 416 LLLSGSKDSTLKIWEI 431
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQ 136
HT V CV W D + +GS D TI +W Q
Sbjct: 240 HTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQ 271
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTW--IDDE 211
H V +AWS S+ + S S+D T+ +W++ S T +K +T + + +DD
Sbjct: 512 HVDDVLDLAWSK-SQHLLSSSMDKTVRLWNL---SSQTCLKVFSHSDYVTCIQFNPVDDR 567
Query: 212 TIVSTGQDANTRVWTVP 262
+S DA RVW++P
Sbjct: 568 YFISGSLDAKVRVWSIP 584
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTW-IDDET 214
HT CV ++P S + SGS D T+ +W V K + AH +T + + D
Sbjct: 112 HTNYAFCVNFNPQSNMIVSGSFDETVRIWDV-TTGKCLKVLPAH-SDPVTAVDFNRDGSL 169
Query: 215 IVSTGQDANTRVW 253
IVS+ D R+W
Sbjct: 170 IVSSSYDGLCRIW 182
Score = 31.9 bits (69), Expect = 0.44
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWS 127
HT V VA P +ASGSLD T+ +W+
Sbjct: 284 HTETVMNVACHPTENLIASGSLDKTVRIWT 313
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 74 DSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTGQ-DANTRV 250
+ KR+ SGS D + +W ++ SK + K + + E ++++G D R+
Sbjct: 254 NGKRIVSGSEDNCVHMWELN--SKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRI 311
Query: 251 WTVPK 265
WT K
Sbjct: 312 WTQKK 316
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +2
Query: 50 VNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQI---TGLTWIDDETIV 220
V+ V +SP+ K + G+LD T+ +W++ +K H +Q + + + + IV
Sbjct: 201 VSFVRFSPNGKFILVGTLDNTLRLWNISS-AKFLKTYTGHVNAQYCISSAFSVTNGKRIV 259
Query: 221 STGQDANTRVW 253
S +D +W
Sbjct: 260 SGSEDNCVHMW 270
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 32 GFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWI-DD 208
GF+T+ VN WSPD + +A L ++++ K ++ H ++ I LTW +
Sbjct: 192 GFNTSIVNIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEA-ICYLTWAPNG 250
Query: 209 ETIVSTGQDANTRVWTVPK 265
+ I ++G D +W V K
Sbjct: 251 KYIATSGLDKQVLLWDVDK 269
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Frame = +2
Query: 8 KLAHNKEWGFHTARVNCVAWSPDS-KRVASGSLDTTIIVWSVDQPSKHT-IIK--NAHPQ 175
++AH ++ H V + ++ S ++ASG+ D T+ +W + PSK + +K ++ Q
Sbjct: 104 EIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDLANPSKPSHYLKGTGSYMQ 163
Query: 176 SQITGLTWID--DETIVSTGQDANTRVWTV 259
S+I+ L+W + ST + T +W V
Sbjct: 164 SEISSLSWNKGFQHVLASTSHNGTTVIWDV 193
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTW--IDDE 211
H V ++WS S+ + S S+D T+ +W + S T +K +T + + +DD
Sbjct: 467 HLDDVLDLSWSK-SQHLLSSSMDKTVRLWDL---SSKTCLKVFSHSDYVTCIQFNPVDDN 522
Query: 212 TIVSTGQDANTRVWTVPKA*TTPFND 289
+S DA R+W++P +ND
Sbjct: 523 YFISGSLDAKVRIWSIPDHQVVDWND 548
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKR-VASGSLDTTIIVWSVDQPSK 145
H+ VNCV+W+P + R +AS S D TI +W +P+K
Sbjct: 484 HSMTVNCVSWNPKNPRMLASASDDQTIRIWGPGKPNK 520
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/64 (23%), Positives = 26/64 (40%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
H V+ V+WSPD ++ + + +W VD N + ++ W D T
Sbjct: 268 HQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTR 327
Query: 218 VSTG 229
+ G
Sbjct: 328 LVCG 331
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 50 VNCVAWSPDSKRVASGSLDTT--IIVWSVD 133
V+ AW PDS R+ GS D I++W D
Sbjct: 316 VSSCAWFPDSTRLVCGSSDPERGIVMWDTD 345
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 74 DSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTW--IDDETIVSTGQDANTR 247
DS +ASGS D+ + +W++ + +K + + H + + ++W + + S D R
Sbjct: 454 DSSFIASGSEDSQVYIWNL-KNTKPLEVLSGHSMT-VNCVSWNPKNPRMLASASDDQTIR 511
Query: 248 VW 253
+W
Sbjct: 512 IW 513
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDD--- 208
HT V VA+S D++++ S S D TI +W+ K+TI + + ++ + + +
Sbjct: 104 HTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLV 163
Query: 209 ETIVSTGQDANTRVWTV 259
TIVS D +VW +
Sbjct: 164 PTIVSASWDKTVKVWNL 180
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSK 145
H+ +N VA SPD ASG D I++W + + K
Sbjct: 192 HSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKK 227
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +2
Query: 59 VAWSPDSKRVASGSLDTTIIVWSVDQ 136
VAWSP+ KR+A GS+D TI V+ VD+
Sbjct: 164 VAWSPNGKRLACGSMDGTICVFDVDR 189
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQ 175
HT+ V V SPD +A+GS D T+ +W + + + N + Q
Sbjct: 242 HTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQ 287
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDD--- 208
HT V VA+S D++++ S S D TI +W+ K+TI + + ++ + + +
Sbjct: 104 HTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLV 163
Query: 209 ETIVSTGQDANTRVWTV 259
TIVS D +VW +
Sbjct: 164 PTIVSASWDKTVKVWNL 180
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSK 145
H+ +N VA SPD ASG D I++W + + K
Sbjct: 192 HSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKK 227
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 50 VNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTG 229
+N V W+P +R+ +GS +W+ Q +I AH Q I + W +E + +G
Sbjct: 126 INRVLWTPSGRRLITGSQSGEFTLWN-GQSFNFEMILQAHDQ-PIRSMVWSHNENYMVSG 183
Query: 230 QDANT-RVW 253
D T + W
Sbjct: 184 DDGGTLKYW 192
Score = 36.7 bits (81), Expect = 0.015
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 38 HTARVNCVAWSP-DSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDET 214
HT V +AW P + SGS D +I W V + I NAH S + L W
Sbjct: 351 HTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIPNAHDNS-VWDLAWHPIGY 409
Query: 215 IVSTG-QDANTRVW 253
++ +G D T+ W
Sbjct: 410 LLCSGSNDHTTKFW 423
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = +2
Query: 17 HNKEWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLT 196
H + + H V+C+ + + + SGS D T+ VW+V+ K I +N Q +I +
Sbjct: 256 HVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVE--DKAFITENHGHQGEILAID 313
Query: 197 WIDDETIVSTGQDANTRVWTVPKA 268
+ E ++ G+D VP++
Sbjct: 314 ALRKERALTVGRDRTMLYHKVPES 337
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
HT VN + ++PD + V SG D + VW + T K +H + QI L + E +
Sbjct: 142 HTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFK-SH-EGQIQSLDFHPHEFL 199
Query: 218 VSTGQ-DANTRVW 253
++TG D + W
Sbjct: 200 LATGSADRTVKFW 212
Score = 32.7 bits (71), Expect = 0.25
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +2
Query: 47 RVNCVA--WSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIV 220
R NC++ + P + ASGSLDT + +W + + K + T D +V
Sbjct: 101 RSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFT-PDGRWVV 159
Query: 221 STGQDANTRVW 253
S G+D +VW
Sbjct: 160 SGGEDNIVKVW 170
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
HT VN + ++PD + V SG D + VW + T K +H + QI L + E +
Sbjct: 142 HTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFK-SH-EGQIQSLDFHPHEFL 199
Query: 218 VSTGQ-DANTRVW 253
++TG D + W
Sbjct: 200 LATGSADRTVKFW 212
Score = 32.7 bits (71), Expect = 0.25
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +2
Query: 47 RVNCVA--WSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIV 220
R NC++ + P + ASGSLDT + +W + + K + T D +V
Sbjct: 101 RSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFT-PDGRWVV 159
Query: 221 STGQDANTRVW 253
S G+D +VW
Sbjct: 160 SGGEDNIVKVW 170
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 35 FHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSK 145
+H A N V++SPD + +AS S D T+ +W + P K
Sbjct: 348 YHRATCNAVSYSPDCELMASASEDATVALWKLYPPHK 384
Score = 35.1 bits (77), Expect = 0.047
Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLT------W 199
H V V++ P + +GS D + +W Q H + +A S+ G+ W
Sbjct: 16 HRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQ---HRAVSSAWAHSRANGVLAVAASPW 72
Query: 200 IDDETIVSTGQDANTRVWTV 259
+ ++ I+S G+D + W +
Sbjct: 73 LGEDKIISQGRDGTVKCWDI 92
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV-DQPSKHTIIKNAHPQSQITGLTWIDDET 214
H V+CVA + DS +A+GS DTT++VW + + ++N H + + D +
Sbjct: 1045 HKDVVSCVAVTADSTILATGSYDTTVMVWDILRMRTPEKRVRNTHAEVLRKDIVIADAPS 1104
Query: 215 IVSTGQD 235
+ G D
Sbjct: 1105 HILCGHD 1111
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNA---HPQSQITGLTWIDD 208
H + VN +A + D + SGS D +I+VW + S + ++ A H ++ I L + D
Sbjct: 279 HKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKA-ILSLFNVSD 337
Query: 209 ETIVSTGQDANTRVW 253
++S D R+W
Sbjct: 338 -LLLSGSADRTVRIW 351
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 38 HTARVNCVAWSPDS-KRVASGSLDTTIIVWSVDQ 136
H VNCV+WSP + +AS S D TI +W +D+
Sbjct: 530 HAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDR 563
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 50 VNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDD-ETIVST 226
++C W PD + + +G D +I +W +D K K Q +++ + DD + +VS
Sbjct: 365 ISC-GWYPDGQGIIAGMTDRSICMWDLDGREKE-CWKGQRTQ-KVSDIAMTDDGKWLVSV 421
Query: 227 GQDA 238
+D+
Sbjct: 422 CKDS 425
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
H + + WS D ++ S S D + +W +D S+ + S I D I
Sbjct: 234 HEGSIFRIVWSLDGSKIVSVSDDRSARIWEID--SQEVVGPVLFGHSVRVWDCCISDSLI 291
Query: 218 VSTGQDANTRVWTV 259
V+ G+D RVW V
Sbjct: 292 VTAGEDCTCRVWGV 305
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 12/71 (16%)
Frame = +2
Query: 83 RVASGSLDTTIIVW--------SVDQ---PSKHTIIKNAHPQSQITGLTW-IDDETIVST 226
R+ASG++ IIVW +VD + H + H + I + W +D IVS
Sbjct: 195 RIASGTIFNEIIVWRAVGLDGDNVDHGHYSASHMLRLTGH-EGSIFRIVWSLDGSKIVSV 253
Query: 227 GQDANTRVWTV 259
D + R+W +
Sbjct: 254 SDDRSARIWEI 264
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 155 IKNAHPQSQITGLTWIDDETIVSTGQDANTRVWTVPK 265
I +AH S I G+ W+D + STG D R W + K
Sbjct: 1228 IASAH-SSAIKGV-WMDTNWVFSTGLDQRVRCWFLEK 1262
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 36.7 bits (81), Expect = 0.015
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
H + + WS D ++ S S D + +W +D S+ + S I D I
Sbjct: 234 HEGSIFRIVWSLDGSKIVSVSDDRSARIWEID--SQEVVGPVLFGHSVRVWDCCISDSLI 291
Query: 218 VSTGQDANTRVWTV 259
V+ G+D RVW V
Sbjct: 292 VTAGEDCTCRVWGV 305
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 12/71 (16%)
Frame = +2
Query: 83 RVASGSLDTTIIVW--------SVDQ---PSKHTIIKNAHPQSQITGLTW-IDDETIVST 226
R+ASG++ IIVW +VD + H + H + I + W +D IVS
Sbjct: 195 RIASGTIFNEIIVWRAVGLDGDNVDHGHYSASHMLRLTGH-EGSIFRIVWSLDGSKIVSV 253
Query: 227 GQDANTRVWTV 259
D + R+W +
Sbjct: 254 SDDRSARIWEI 264
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 155 IKNAHPQSQITGLTWIDDETIVSTGQDANTRVWTVPK 265
I +AH S I G+ W+D + STG D R W + K
Sbjct: 1228 IASAH-SSAIKGV-WMDTNWVFSTGLDQRVRCWFLEK 1262
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 36.7 bits (81), Expect = 0.015
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV 130
H A V C+A SPD+ + +GS D+T+++W +
Sbjct: 2667 HCAPVTCLALSPDNNFLVTGSRDSTVLLWRI 2697
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
HT V + S D ++ SGS D ++IVW D+ + + + SQ++ + + E +
Sbjct: 898 HTGTVRAI--SSDRGKIVSGSDDLSVIVW--DKQTTQLLEELKGHDSQVSCVKMLSGERV 953
Query: 218 VSTGQDANTRVWTV 259
++ D ++W V
Sbjct: 954 LTAAHDGTVKMWDV 967
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 36.3 bits (80), Expect = 0.020
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWID-DET 214
H V + ++ +ASGS D II+W D + + + + Q+T L ++D +
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILW--DVVGESGLFRLRGHRDQVTDLVFLDGGKK 162
Query: 215 IVSTGQDANTRVW 253
+VS+ +D RVW
Sbjct: 163 LVSSSKDKFLRVW 175
Score = 35.5 bits (78), Expect = 0.035
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = +2
Query: 50 VNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTG 229
V VA SPD+K +A LD+T+ V+ +D K + H + D E IV+
Sbjct: 543 VLAVAISPDAKHIAVALLDSTVKVFYMDS-LKFYLSLYGHKLPVMCIDISSDGELIVTGS 601
Query: 230 QDANTRVW 253
QD N ++W
Sbjct: 602 QDKNLKIW 609
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 36.3 bits (80), Expect = 0.020
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWID---- 205
HT V VA+S D++++ S S D TI +W+ K+TI +
Sbjct: 104 HTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTL 163
Query: 206 DETIVSTGQDANTRVWTV 259
TIVS D +VW +
Sbjct: 164 QPTIVSASWDKTVKVWNL 181
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSK 145
HT V+ VA SPD ASG D +++W + + K
Sbjct: 193 HTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKK 228
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +2
Query: 50 VNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTG 229
VN +AWS D++ V + +D I VW+ S + + + + + +S G
Sbjct: 547 VNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPRIAMSAG 606
Query: 230 QDANTRVWTV 259
D T VW +
Sbjct: 607 YDGKTIVWDI 616
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 35.9 bits (79), Expect = 0.027
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
H + V +A SPD + +ASG D TI++W D + I S + L++ + ++
Sbjct: 540 HRSMVLSLAMSPDGRYMASGDEDGTIMMW--DLSTARCITPLMGHNSCVWSLSYSGEGSL 597
Query: 218 VSTGQ-DANTRVWTV 259
+++G D ++W V
Sbjct: 598 LASGSADCTVKLWDV 612
Score = 31.9 bits (69), Expect = 0.44
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 59 VAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTG-QD 235
V W P+ +A+GS D T+ +W V Q + I H +S + L D +++G +D
Sbjct: 505 VDWHPNCNYIATGSSDKTVRLWDV-QTGECVRIFIGH-RSMVLSLAMSPDGRYMASGDED 562
Query: 236 ANTRVWTVPKA 268
+W + A
Sbjct: 563 GTIMMWDLSTA 573
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHT 151
H + V +++S + +ASGS D T+ +W V +K T
Sbjct: 582 HNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLT 619
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWS 127
H+ V +SP V S S DTTI +WS
Sbjct: 417 HSGPVYSATFSPPGDFVLSSSADTTIRLWS 446
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 35.9 bits (79), Expect = 0.027
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +2
Query: 8 KLAHNKEWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQS--Q 181
+L +K+ H VN V+++ D + SGS D +I+W S + H + Q
Sbjct: 44 RLGLDKKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQ 103
Query: 182 ITGLTWIDDETIVSTGQDANTR 247
+ + DD TIV++ D R
Sbjct: 104 AKFMPFSDDRTIVTSAADKQVR 125
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/52 (28%), Positives = 20/52 (38%)
Frame = +2
Query: 50 VNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWID 205
VNC+ P + S +DT I +W+ K NA S W D
Sbjct: 355 VNCIESHPHMPLMCSSGIDTDIKIWTPGGTEKPLSPGNAKQASGFGNPRWFD 406
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +2
Query: 29 WGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDD 208
W +H+A VN + +S D + SG + ++VW +D K + + P + W D
Sbjct: 279 WHWHSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGKKKFLPRIGSP---LLYFMWSPD 335
Query: 209 ETIVS 223
T+ S
Sbjct: 336 PTLSS 340
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 35.5 bits (78), Expect = 0.035
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTW 199
H + V + WS D + +ASG D ++VW + S+ I+K + + +TW
Sbjct: 297 HKSEVCGLKWSHDDRELASGGNDNQLLVW--NNHSQQPILKLTEHTAAVKAITW 348
Score = 31.5 bits (68), Expect = 0.58
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +2
Query: 38 HTARVNCVAWSP-DSKRVAS--GSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDD 208
HTA V + WSP S +AS G+ D I W+ ++ + + SQ+ L W +
Sbjct: 339 HTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQ---LNSIDTGSQVCNLAWSKN 395
Query: 209 -ETIVST-GQDAN-TRVWTVP 262
IVST G N +W P
Sbjct: 396 VNEIVSTHGYSQNQIMLWKYP 416
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV 130
H+ RV +A SPD + + +G+ D T+ W+V
Sbjct: 427 HSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 35.5 bits (78), Expect = 0.035
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Frame = +2
Query: 23 KEWGFHTARVNCVAWSPDSKRV-ASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTW 199
+E+ H+A VNC+ S RV +G D + +W++ +P + I+ S I +T+
Sbjct: 103 REFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKP--NAILSLYGHSSGIDSVTF 160
Query: 200 IDDETIVSTGQDANT-RVWTVPKA 268
E +V+ G + T ++W + +A
Sbjct: 161 DASEGLVAAGAASGTIKLWDLEEA 184
Score = 33.5 bits (73), Expect = 0.14
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +2
Query: 47 RVNCVA--WSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIV 220
R NCV+ + P + ASGSLDT + +W + + K + T D IV
Sbjct: 194 RSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFT-PDGRWIV 252
Query: 221 STGQDANTRVW 253
S G+D +VW
Sbjct: 253 SGGEDNVVKVW 263
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
HT VN + ++PD + + SG D + VW D + + + + +I L + E +
Sbjct: 235 HTRGVNVLRFTPDGRWIVSGGEDNVVKVW--DLTAGKLLHEFKSHEGKIQSLDFHPHEFL 292
Query: 218 VSTGQ-DANTRVW 253
++TG D + W
Sbjct: 293 LATGSADKTVKFW 305
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 35.5 bits (78), Expect = 0.035
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 14/95 (14%)
Frame = +2
Query: 23 KEWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSV-------DQPSKHTIIK---NAHP 172
K+W H V C+ +S D + SGS D +I VWS+ + +T+ + N H
Sbjct: 114 KKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHT 173
Query: 173 QSQITGLTWID----DETIVSTGQDANTRVWTVPK 265
S +T + ID + I+S+ +D +VW++ +
Sbjct: 174 MS-VTDIV-IDYGGCNAVIISSSEDRTCKVWSLSR 206
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 35.1 bits (77), Expect = 0.047
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIK 160
HT +V + W+P+ R+ S S D +IVW+ K IK
Sbjct: 64 HTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIK 104
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 35.1 bits (77), Expect = 0.047
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIK 160
HT +V + W+P+ R+ S S D +IVW+ K IK
Sbjct: 64 HTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIK 104
Score = 28.7 bits (61), Expect = 4.1
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWS 127
H R++C+ S D + +GS D+ + +W+
Sbjct: 340 HRNRISCLGLSADGSALCTGSWDSNLKIWA 369
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 35.1 bits (77), Expect = 0.047
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQS--QITGLTWIDDE 211
H VN V ++ + SGS D I++W+ S+ + H ++ Q + + DD
Sbjct: 54 HEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFTDDR 113
Query: 212 TIVSTGQDANTRV 250
TI+++G D R+
Sbjct: 114 TIITSGADGQVRL 126
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 35.1 bits (77), Expect = 0.047
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPS 142
HTA+V C+ S +ASGS D T+I+W + S
Sbjct: 3379 HTAKVTCLRVSQPYMMIASGSDDCTVIIWDLSSLS 3413
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +2
Query: 2 EFKLAHNKEWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNA 166
E+KL +K FH V + + D K++ SG ++ W+V + +K A
Sbjct: 3529 EYKLILHKVLKFHKQPVTALHLTSDLKQLLSGDSAGQLLSWTVPDETLRASMKQA 3583
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 34.7 bits (76), Expect = 0.062
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +2
Query: 17 HNKEWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLT 196
H + H + V + WS D++ +ASG D + VW +Q S ++K + + + +
Sbjct: 327 HVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVW--NQHSTQPVLKYSEHTAAVKAIA 384
Query: 197 W 199
W
Sbjct: 385 W 385
Score = 31.1 bits (67), Expect = 0.76
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRV---ASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDD 208
HTA V +AWSP + G+ D I W+ + +T + + SQ+ L W +
Sbjct: 376 HTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNT---TTNTHLSSIDTCSQVCNLAWSKN 432
Query: 209 -ETIVST-GQDAN-TRVWTVP 262
+VST G N VW P
Sbjct: 433 VNELVSTHGYSQNQIIVWKYP 453
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV 130
HT RV +A SPD + + +G+ D T+ W+V
Sbjct: 464 HTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 34.7 bits (76), Expect = 0.062
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +2
Query: 8 KLAHNKEWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIK 160
KL + + + R V WSPD+KR+ SGS D I W D S H + +
Sbjct: 187 KLTYYRSLPRVSGRALSVTWSPDAKRIFSGSSDGLIRCW--DATSCHEVYR 235
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 34.7 bits (76), Expect = 0.062
Identities = 17/70 (24%), Positives = 30/70 (42%)
Frame = +2
Query: 50 VNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTG 229
VN + WS D++ V + +D I VW+ S + S + + + +S G
Sbjct: 600 VNMIIWSLDNRFVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMSAG 659
Query: 230 QDANTRVWTV 259
D T +W +
Sbjct: 660 YDGKTIIWDI 669
Score = 27.5 bits (58), Expect = 9.4
Identities = 29/93 (31%), Positives = 36/93 (38%), Gaps = 17/93 (18%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRV---ASGSLDTTIIVWS-----------VDQPSKHTI--IKNAH 169
HT V +A+SP V S S D T +W V PS NA
Sbjct: 388 HTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWDARYSQWLPRIYVPSPSDANTGSTSNAS 447
Query: 170 PQSQITGLTWIDDETIVSTGQ-DANTRVWTVPK 265
QI + + TI TG D+N RVW+ K
Sbjct: 448 QSHQILCCAYNANGTIFVTGSSDSNARVWSASK 480
Score = 25.0 bits (52), Expect(2) = 7.2
Identities = 11/48 (22%), Positives = 22/48 (45%)
Frame = +2
Query: 47 RVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITG 190
++ C A++ + +GS D+ VWS +P+ + H + G
Sbjct: 451 QILCCAYNANGTIFVTGSSDSNARVWSASKPNLDDAEQPTHELDVLRG 498
Score = 21.0 bits (42), Expect(2) = 7.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Frame = +2
Query: 194 TWIDDETIVSTGQDANTRVWT 256
+W + IV+ +D + +WT
Sbjct: 534 SWFCHDNIVTCSRDGSAIIWT 554
>At2g31300.1 68415.m03821 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
identical to putative ARP2/3 protein complex subunit p41
(GI:4432825)[Arabidopsis thaliana]; similar to ARP2/3
complex 41 kDa subunit (P41-ARC) (Actin-related protein
2/3 complex subunit 1B) (SP:Q9WV32) [Mus musculus]
Length = 378
Score = 34.7 bits (76), Expect = 0.062
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +2
Query: 50 VNCVAWSPDSKRVASGSLDTTIIVW-SVDQPSKHTI-IKNAHPQSQITGLTWID-DETIV 220
+ C AWSPD VA +T + ++ S+ Q + + H Q ++G+ W IV
Sbjct: 13 ITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQI-VSGIDWSSKSNKIV 71
Query: 221 STGQDANTRVWTVPKA*TTP 280
+ D N+ VW++ A P
Sbjct: 72 TVSHDRNSYVWSLEGAEWVP 91
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +2
Query: 56 CVAWSPDSKRVASGSLDTTIIVWSVDQPSK---HTIIKNAHPQSQITGLTWIDDETIV-S 223
CV WSP + A GS T+ + +Q + +I+ H +S +T + W + ++ +
Sbjct: 104 CVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH-ESSVTSVAWHPNNVLLAT 162
Query: 224 TGQDANTRVWT 256
T D RV++
Sbjct: 163 TSTDGKCRVFS 173
>At2g30910.2 68415.m03768 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 34.7 bits (76), Expect = 0.062
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +2
Query: 50 VNCVAWSPDSKRVASGSLDTTIIVW-SVDQPSKHTI-IKNAHPQSQITGLTWID-DETIV 220
+ C AWSPD VA +T + ++ S+ Q + + H Q ++G+ W IV
Sbjct: 13 ITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQI-VSGIDWSSKSNKIV 71
Query: 221 STGQDANTRVWTVPKA*TTP 280
+ D N+ VW++ A P
Sbjct: 72 TVSHDRNSYVWSLEGAEWVP 91
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +2
Query: 56 CVAWSPDSKRVASGSLDTTIIVWSVDQPSK---HTIIKNAHPQSQITGLTWIDDETIV-S 223
CV WSP + A GS T+ + +Q + +I+ H +S +T + W + ++ +
Sbjct: 104 CVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH-ESSVTSVAWHPNNVLLAT 162
Query: 224 TGQDANTRVWT 256
T D RV++
Sbjct: 163 TSTDGKCRVFS 173
>At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 34.7 bits (76), Expect = 0.062
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +2
Query: 50 VNCVAWSPDSKRVASGSLDTTIIVW-SVDQPSKHTI-IKNAHPQSQITGLTWID-DETIV 220
+ C AWSPD VA +T + ++ S+ Q + + H Q ++G+ W IV
Sbjct: 13 ITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQI-VSGIDWSSKSNKIV 71
Query: 221 STGQDANTRVWTVPKA*TTP 280
+ D N+ VW++ A P
Sbjct: 72 TVSHDRNSYVWSLEGAEWVP 91
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +2
Query: 56 CVAWSPDSKRVASGSLDTTIIVWSVDQPSK---HTIIKNAHPQSQITGLTWIDDETIV-S 223
CV WSP + A GS T+ + +Q + +I+ H +S +T + W + ++ +
Sbjct: 104 CVQWSPKENKFAVGSGAKTVCICYYEQENNWWVSKLIRKRH-ESSVTSVAWHPNNVLLAT 162
Query: 224 TGQDANTRVWT 256
T D RV++
Sbjct: 163 TSTDGKCRVFS 173
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 34.7 bits (76), Expect = 0.062
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
HT V AWSP + +A+ S D T +W I ++++ ++W +
Sbjct: 73 HTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSC 132
Query: 218 VST-GQDANTRVWTV 259
++T +D + +W V
Sbjct: 133 LATCSRDKSVWIWEV 147
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIV-WSVDQPSKHTIIK------NAHPQSQITGLT 196
HT V V W P + S S D TI V WS D ++ ++ N H S + ++
Sbjct: 162 HTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGH-SSTVWSIS 220
Query: 197 W-IDDETIVSTGQDANTRVW 253
+ + +V+ D ++W
Sbjct: 221 FNAAGDKMVTCSDDLTLKIW 240
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 34.3 bits (75), Expect = 0.082
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = +2
Query: 8 KLAHNKEWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQIT 187
+L+ +E H VN +AW+ + + SGS D I +W+ I H +
Sbjct: 39 RLSQEQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFC 98
Query: 188 G--LTWIDDETIVSTGQDANTRVWTVPK 265
+ DE +VS DA R++ +
Sbjct: 99 TKFVPETSDELVVSGAGDAEVRLFNTSR 126
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 34.3 bits (75), Expect = 0.082
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 13/82 (15%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRV-ASGSLDTTIIVWSVDQPSKHT----------IIKNAHPQSQI 184
H A V CV WSPD V S + D + +W D+ SK + ++A + ++
Sbjct: 385 HKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDRVSKKSDRAAKSPAGLFFQHAGHRDKV 444
Query: 185 TGLTW--IDDETIVSTGQDANT 244
W D TIVS D T
Sbjct: 445 VDFHWNASDPWTIVSVSDDCET 466
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Frame = +2
Query: 38 HTARVNCVAWSP-DSKRVASGSLDTTIIVWSVDQPSKH----TIIKNAHPQSQITGLTWI 202
H A ++CV W+P D + +GS D T+ ++ + + + I K ++ + + W
Sbjct: 336 HDADLHCVDWNPHDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWS 395
Query: 203 DDETIV--STGQDANTRVW 253
D++ V S+ +D +W
Sbjct: 396 PDKSSVFGSSAEDGLLNIW 414
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +2
Query: 26 EWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTW-- 199
E+ HT + ++WS + + S S+D T+ +W V S I+ +S +T + +
Sbjct: 358 EFRGHTGEILDLSWS-EKGFLLSSSVDETVRLWRVG--SSDECIRVFSHKSFVTCVAFNP 414
Query: 200 IDDETIVSTGQDANTRVWTVPKA*TTPFND 289
+DD +S D R+W V + + D
Sbjct: 415 VDDNYFISGSIDGKVRIWDVSQFRVVDYTD 444
>At5g28350.2 68418.m03443 expressed protein
Length = 1087
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 26 EWGF---HTARVNCVAWSPDSKRVASGSLDTTIIVWSV 130
+WG+ +T VN +AW+PD+ A G + VWSV
Sbjct: 258 DWGYSADYTGPVNNIAWTPDNSAFAVGWKSRGLAVWSV 295
>At5g28350.1 68418.m03442 expressed protein
Length = 1127
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 26 EWGF---HTARVNCVAWSPDSKRVASGSLDTTIIVWSV 130
+WG+ +T VN +AW+PD+ A G + VWSV
Sbjct: 298 DWGYSADYTGPVNNIAWTPDNSAFAVGWKSRGLAVWSV 335
>At3g61480.1 68416.m06885 expressed protein
Length = 1091
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +2
Query: 26 EWGF---HTARVNCVAWSPDSKRVASGSLDTTIIVWSV 130
+WG+ +T VN +AW+PD+ A G + VWSV
Sbjct: 252 DWGYSADYTGPVNNIAWTPDNSAFAVGWKSRGLAVWSV 289
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 33.9 bits (74), Expect = 0.11
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +2
Query: 32 GF-HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDD 208
GF H ++C+A S D + + SGS D T VW V + NAH + ++ D
Sbjct: 207 GFRHLDAISCLALSEDKRLLYSGSWDKTFKVWRVSD-LRCVESVNAHEDAVNAVVSGFDG 265
Query: 209 ETIVSTGQ-DANTRVW 253
+V TG D +VW
Sbjct: 266 --LVFTGSADGTVKVW 279
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDET- 214
HT V V + D+K + SGS D T+ +W + P K + + + ++T
Sbjct: 77 HTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQ---KEYESVAAVNTVVLHPNQTE 133
Query: 215 IVSTGQDANTRVW 253
++S Q+ N RVW
Sbjct: 134 LISGDQNGNIRVW 146
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV-DQPSKHT 151
HT+RV +A SPD VAS + D T+ +W+V +P K T
Sbjct: 371 HTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTT 409
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVW----SVDQPSKHTIIKNAHPQSQITGLTWID 205
HT V + WS K++ASG D + +W + P++ + + + + L W
Sbjct: 235 HTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCP 294
Query: 206 -DETIVSTG 229
++++TG
Sbjct: 295 FQASLLATG 303
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV-DQPSKHT 151
HT+RV +A SPD VAS + D T+ +W+V +P K T
Sbjct: 354 HTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTT 392
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/69 (20%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +2
Query: 50 VNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTG 229
+N + W S V + +L T+ +W S + ++ + +T + W D ++ G
Sbjct: 95 LNLLDWG--SSNVLAIALGDTVYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIG 152
Query: 230 QD-ANTRVW 253
D + ++W
Sbjct: 153 LDNSEVQLW 161
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVW-----SVDQPSKHTIIKNAHPQSQITGLTWI 202
HT V + WS K++ASG D + +W + P++ + + + + L W
Sbjct: 217 HTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRALAWC 276
Query: 203 D-DETIVSTG 229
++++TG
Sbjct: 277 PFQASLLATG 286
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +2
Query: 50 VNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTG 229
V + W+PD + VA G ++ + +W + +K H QS++ L W + I++TG
Sbjct: 185 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGH-QSRVGSLAW--NNHILTTG 241
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV 130
HT+RV +A SPD VAS + D T+ W+V
Sbjct: 401 HTSRVLYMAQSPDGCTVASAAGDETLRFWNV 431
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +2
Query: 50 VNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTG 229
+N + W S V + +LD T+ +W S ++ + +T + W D V+ G
Sbjct: 143 LNLLDWG--SANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVG 200
Query: 230 -QDANTRVW 253
++ ++W
Sbjct: 201 LNNSEVQLW 209
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAH----PQSQITGLTWID 205
HT V + WS +++ASG D + +W S ++ + H S + L W
Sbjct: 265 HTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCP 324
Query: 206 -DETIVSTGQDANTR 247
+++TG R
Sbjct: 325 FQANLLATGGGGGDR 339
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +2
Query: 50 VNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTG 229
V + W+PD + VA G ++ + +W + +K H QS++ L W + I++TG
Sbjct: 175 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGH-QSRVGSLAW--NNHILTTG 231
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV 130
HT+RV +A SPD VAS + D T+ W+V
Sbjct: 391 HTSRVLYMAQSPDGCTVASAAGDETLRFWNV 421
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +2
Query: 50 VNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTG 229
+N + W S V + +LD T+ +W S ++ + +T + W D V+ G
Sbjct: 133 LNLLDWG--SANVLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVG 190
Query: 230 -QDANTRVW 253
++ ++W
Sbjct: 191 LNNSEVQLW 199
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAH----PQSQITGLTWID 205
HT V + WS +++ASG D + +W S ++ + H S + L W
Sbjct: 255 HTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCP 314
Query: 206 -DETIVSTGQDANTR 247
+++TG R
Sbjct: 315 FQANLLATGGGGGDR 329
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/76 (26%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Frame = +2
Query: 38 HTAR--VNCVAWSPDSKRV-ASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDD 208
H +R V +++S D + + ASG I +W++++ ++I++AH S I L ++ +
Sbjct: 221 HASRGAVTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAH-DSSIISLNFLAN 279
Query: 209 E-TIVSTGQDANTRVW 253
E ++S D + ++W
Sbjct: 280 EPVLMSASADNSLKMW 295
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/77 (25%), Positives = 36/77 (46%)
Frame = +2
Query: 23 KEWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWI 202
+E+ HT R+ + +S D K V S S+D ++ +W V + I H IT L+
Sbjct: 551 REFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILAKQ---IDGVHVDVPITALSLS 607
Query: 203 DDETIVSTGQDANTRVW 253
+ +++T V+
Sbjct: 608 PNMDVLATAHSDQNGVY 624
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLD-TTIIVWSVDQPSKHTII---KNAHPQSQITGLTW-I 202
H ++NCV W P S+D ++ WS+D K + ++A + ++G W
Sbjct: 119 HVGKINCVLWCPSGNSDKLISMDEQNLVFWSLDSSKKSAEVLSKESAGMRHSLSGGAWNP 178
Query: 203 DDETIVSTGQDANTRVW 253
D V+ +++ + W
Sbjct: 179 HDVNSVAATSESSIQFW 195
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/68 (20%), Positives = 31/68 (45%)
Frame = +2
Query: 62 AWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTGQDAN 241
AW+P + + +++I W + K+ I+ AH ++ L + +VS ++
Sbjct: 175 AWNPHDVNSVAATSESSIQFWDLRTMKKNNSIERAHVRNVDYNLK--REHILVSADDESG 232
Query: 242 TRVWTVPK 265
+W + K
Sbjct: 233 IHLWDLRK 240
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
HT ++ + +SPD + V SG LD + VW D + + + + I L + E +
Sbjct: 90 HTRGISTIEFSPDGRWVVSGGLDNVVKVW--DLTAGKLLHEFKCHEGPIRSLDFHPLEFL 147
Query: 218 VSTGQ-DANTRVW 253
++TG D + W
Sbjct: 148 LATGSADRTVKFW 160
Score = 30.3 bits (65), Expect = 1.3
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
H + + V + P + +ASGS DT + VW + K H + T D +
Sbjct: 48 HRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYK-GHTRGISTIEFSPDGRWV 106
Query: 218 VSTGQDANTRVW 253
VS G D +VW
Sbjct: 107 VSGGLDNVVKVW 118
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWID-DET 214
HT+ V+ VA++ + V +G+ I +W +++ SK H +S + + + E
Sbjct: 6 HTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEE-SKMVRAFTGH-RSNCSAVEFHPFGEF 63
Query: 215 IVSTGQDANTRVWTVPK 265
+ S D N RVW K
Sbjct: 64 LASGSSDTNLRVWDTRK 80
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTW--IDDE 211
H V ++WS S+ + S S+D T+ +W ++ S + AH +T + + +D++
Sbjct: 518 HLDDVLDLSWSR-SQLLLSSSMDKTVRLWDIETQSCLKLF--AH-NDYVTCVQFNPLDED 573
Query: 212 TIVSTGQDANTRVWTVPKA*TTPFND 289
+S DA R+W + +ND
Sbjct: 574 YFISGSLDAKIRIWNISNRQVVEWND 599
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 33.1 bits (72), Expect = 0.19
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Frame = +2
Query: 38 HTARVNCVAWSP-DSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWI--DD 208
H+ V V ++P D+ AS SLD TI +W++ P + + +AH Q + + + D
Sbjct: 141 HSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAH-QKGVNCVDYFTGGD 198
Query: 209 ETIVSTGQDANT-RVW 253
+ + TG D +T +VW
Sbjct: 199 KPYLITGSDDHTAKVW 214
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 33.1 bits (72), Expect = 0.19
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Frame = +2
Query: 38 HTARVNCVAWSP-DSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWI--DD 208
H+ V V ++P D+ AS SLD TI +W++ P + + +AH Q + + + D
Sbjct: 141 HSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAH-QKGVNCVDYFTGGD 198
Query: 209 ETIVSTGQDANT-RVW 253
+ + TG D +T +VW
Sbjct: 199 KPYLITGSDDHTAKVW 214
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 33.1 bits (72), Expect = 0.19
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Frame = +2
Query: 38 HTARVNCVAWSP-DSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWI--DD 208
H+ V V ++P D+ AS SLD TI +W++ P + + +AH Q + + + D
Sbjct: 141 HSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAH-QKGVNCVDYFTGGD 198
Query: 209 ETIVSTGQDANT-RVW 253
+ + TG D +T +VW
Sbjct: 199 KPYLITGSDDHTAKVW 214
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +2
Query: 50 VNCVAWSPDSKRVASGSLDTTIIVWSVDQ--PSKHTIIKNAHPQSQITGLTWIDD-ETIV 220
V AW D KR+A G D +I +WS+ S+ I IT + + D ++
Sbjct: 330 VTTCAWDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILL 389
Query: 221 STGQDANTRVW 253
S D + +VW
Sbjct: 390 SRSFDGSLKVW 400
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 33.1 bits (72), Expect = 0.19
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Frame = +2
Query: 38 HTARVNCVAWSP-DSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWI--DD 208
H+ V V ++P D+ AS SLD TI +W++ P + + +AH Q + + + D
Sbjct: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAH-QKGVNCVDYFTGGD 198
Query: 209 ETIVSTGQDANT-RVW 253
+ + TG D +T +VW
Sbjct: 199 KPYLITGSDDHTAKVW 214
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQ--SQITGLTWIDDE 211
H+ + CVA P V S S D I +W ++ T I H Q+T D
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVT-FNPKDTN 156
Query: 212 TIVSTGQDANTRVWTV 259
T S D ++W +
Sbjct: 157 TFASASLDRTIKIWNL 172
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 33.1 bits (72), Expect = 0.19
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
H V+C++ + D + SGS D T+ VW + SK AH + T ++ DD +
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSD-SKCLESIEAHDDAVNTVVSGFDD--L 300
Query: 218 VSTGQ-DANTRVW 253
V TG D +VW
Sbjct: 301 VFTGSADGTLKVW 313
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTW 199
H + + + WS D++ +ASG D + VW +Q S +++ + + + W
Sbjct: 291 HKSEICGLKWSSDNRELASGGNDNKLFVW--NQHSTQPVLRFCEHAAAVKAIAW 342
Score = 28.7 bits (61), Expect = 4.1
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 6/81 (7%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRV---ASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDD 208
H A V +AWSP + G+ D I W+ + +T + SQ+ L W +
Sbjct: 333 HAAAVKAIAWSPHHFGLLASGGGTADRCIRFWNT---TTNTHLNCVDTNSQVCNLVWSKN 389
Query: 209 -ETIVST-GQDAN-TRVWTVP 262
+VST G N VW P
Sbjct: 390 VNELVSTHGYSQNQIIVWKYP 410
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV 130
H+ RV +A SPD + + +G+ D T+ W+V
Sbjct: 421 HSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQS 178
H V+CV ++P + ASGS D TI +W + I ++ QS
Sbjct: 269 HHGPVHCVRFAPTGESYASGSEDGTIRIWQTGPVNPEEISESKPKQS 315
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRV-ASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTW 199
HTA V + WSP + V AS S+D ++ VW + + AH + + ++W
Sbjct: 268 HTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSFKAH-NADVNVISW 321
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 32.7 bits (71), Expect = 0.25
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Frame = +2
Query: 38 HTARVNCVAWSP-DSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWID--- 205
H+ V V ++P D+ AS SLD TI +W++ P + + +AH + G+ +D
Sbjct: 141 HSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTL-DAH----LKGVNCVDYFT 195
Query: 206 --DETIVSTGQDANT-RVW 253
D+ + TG D +T +VW
Sbjct: 196 GGDKPYLITGSDDHTAKVW 214
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/76 (27%), Positives = 29/76 (38%), Gaps = 2/76 (2%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQ--SQITGLTWIDDE 211
H + CVA P V S S D I +W ++ T I H Q+T D
Sbjct: 98 HADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVT-FNPKDTN 156
Query: 212 TIVSTGQDANTRVWTV 259
T S D ++W +
Sbjct: 157 TFASASLDRTIKIWNL 172
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 32.7 bits (71), Expect = 0.25
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWI-DDET 214
H V C+ +S DS+ +ASGS D I +W + + +AH Q +T L++ D
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRI-RTGVCIRRFDAHSQG-VTSLSFSRDGSQ 319
Query: 215 IVSTGQDANTRV 250
++ST D R+
Sbjct: 320 LLSTSFDQTARI 331
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 23 KEWGFHTARVNCVAWSPDSKRVASGSLDTTIIVW 124
KE+ HT+ VN ++ D R+ + S D T+ VW
Sbjct: 341 KEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVW 374
Score = 29.1 bits (62), Expect = 3.1
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 7/90 (7%)
Frame = +2
Query: 11 LAHNKEWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWS-VDQPSKHTIIKNA------H 169
L H ++G + C +SPD + +AS S+D I VW + K + A H
Sbjct: 204 LTHTIKFG-KKSHAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMH 262
Query: 170 PQSQITGLTWIDDETIVSTGQDANTRVWTV 259
+ D E + S QD ++W +
Sbjct: 263 DDPVLCIDFSRDSEMLASGSQDGKIKIWRI 292
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/85 (20%), Positives = 40/85 (47%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
H+ + ++WS ++ R+ S S+D ++ +W + I + + + + +DD+
Sbjct: 355 HSGDILDISWSKNN-RLLSASVDNSVRLWQIGCEDCLGIFSHNNYVTSVQ-FNPVDDDHF 412
Query: 218 VSTGQDANTRVWTVPKA*TTPFNDA 292
+S D R+W+ + + DA
Sbjct: 413 ISGSIDGKVRIWSASQCQVVDWADA 437
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/85 (20%), Positives = 40/85 (47%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
H+ + ++WS ++ R+ S S+D ++ +W + I + + + + +DD+
Sbjct: 355 HSGDILDISWSKNN-RLLSASVDNSVRLWQIGCEDCLGIFSHNNYVTSVQ-FNPVDDDHF 412
Query: 218 VSTGQDANTRVWTVPKA*TTPFNDA 292
+S D R+W+ + + DA
Sbjct: 413 ISGSIDGKVRIWSASQCQVVDWADA 437
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 32.3 bits (70), Expect = 0.33
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRV-ASGSLDTTIIVWSVDQPSK 145
H A V CV WSPD V S + D + +W D+ K
Sbjct: 374 HRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDCDRVGK 410
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Frame = +2
Query: 38 HTARVNCVAWSP-DSKRVASGSLDTTIIVWSVDQPSKH----TIIKNAHPQSQITGLTWI 202
H A ++CV W+P D+ + +GS D T+ V+ + + + K ++ + + W
Sbjct: 325 HDADLHCVDWNPHDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWS 384
Query: 203 DDETIV--STGQDANTRVW 253
D++ V S+ +D +W
Sbjct: 385 PDKSSVFGSSAEDGLLNIW 403
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 32.3 bits (70), Expect = 0.33
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 44 ARVNCVAWSPDSKRV-ASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIV 220
A V CV +SP S + A GS D + + I + H ++ ++ ++D+ET+V
Sbjct: 839 ANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKA-VSYAKFLDNETLV 897
Query: 221 STGQDANTRVWTVPK 265
+ D ++W + K
Sbjct: 898 TASTDNTLKLWDLKK 912
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 32.3 bits (70), Expect = 0.33
Identities = 19/74 (25%), Positives = 34/74 (45%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
HTA+V C+ S +AS S D T+I+W + S + N + + + E +
Sbjct: 3323 HTAKVICLRVSQPYMMIASSSDDCTVIIWDLSSLSFVRQLPNFSVPVTVVYINDLTGEIV 3382
Query: 218 VSTGQDANTRVWTV 259
+ G + VW++
Sbjct: 3383 TAAG--SVLAVWSI 3394
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 32.3 bits (70), Expect = 0.33
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 20 NKEWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSK 145
++E+ H + + +SPD K +AS D + VWS+ + +
Sbjct: 211 DQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEER 252
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/90 (21%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Frame = +2
Query: 26 EWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTW-- 199
E+ H + ++WS + + S S+D T+ +W V ++ + +T + +
Sbjct: 317 EFKGHIGEILDLSWS-EKGYLLSSSVDETVRLWRVGCDE---CLRTFTHNNFVTCVAFNP 372
Query: 200 IDDETIVSTGQDANTRVWTVPKA*TTPFND 289
+DD +S D R+W V + + D
Sbjct: 373 VDDNYFISGSIDGKVRIWDVTRCRVVDYTD 402
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 32.3 bits (70), Expect = 0.33
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 20 NKEWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSK 145
++E+ H + + +SPD K +AS D + VWS+ + +
Sbjct: 211 DQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEER 252
Score = 28.3 bits (60), Expect = 5.4
Identities = 19/90 (21%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Frame = +2
Query: 26 EWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTW-- 199
E+ H + ++WS + + S S+D T+ +W V ++ + +T + +
Sbjct: 317 EFKGHIGEILDLSWS-EKGYLLSSSVDETVRLWRVGCDE---CLRTFTHNNFVTCVAFNP 372
Query: 200 IDDETIVSTGQDANTRVWTVPKA*TTPFND 289
+DD +S D R+W V + + D
Sbjct: 373 VDDNYFISGSIDGKVRIWDVTRCRVVDYTD 402
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 32.3 bits (70), Expect = 0.33
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTI-IKNAHPQSQITGLTWIDDET 214
H VN A+ P + SG+ D + +W +++ + H + + + +
Sbjct: 203 HDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDI 262
Query: 215 IVSTGQDANTRVWTVPK 265
IVS +D + RVW K
Sbjct: 263 IVSNSEDKSIRVWDATK 279
Score = 31.9 bits (69), Expect = 0.44
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTI 154
H V C ++ P V S SLD T+ VW + K T+
Sbjct: 134 HNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTV 172
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 32.3 bits (70), Expect = 0.33
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 29 WGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDD 208
W H+ V+C++ + D + S S D T+ VW + IK AH + + +T
Sbjct: 131 WIKHSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIK-AHDDA-VNSVT--TA 186
Query: 209 ETIVSTGQ-DANTRVW 253
E++V TG D +VW
Sbjct: 187 ESLVFTGSADGTVKVW 202
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 31.9 bits (69), Expect = 0.44
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +2
Query: 32 GFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDE 211
G H+ V C + + SGS+D TI VW ++ +K H + + L W D+
Sbjct: 309 GHHSGEVTCFVVGGEV--LYSGSVDKTIKVWDLNTLQCRMTLKQ-HIGTVTSLLCW--DK 363
Query: 212 TIVSTGQDANTRVW 253
++S+ D ++W
Sbjct: 364 CLISSSLDGTIKLW 377
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 31.9 bits (69), Expect = 0.44
Identities = 20/80 (25%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Frame = +2
Query: 38 HTARVNCVAWSPD----SKRVASGSLDTTIIVWSVDQPSKH---TIIKNAHPQSQITGLT 196
HT V VAW+P+ +ASGS D +I+W++ + + T++K+ ++ + ++
Sbjct: 209 HTDWVRDVAWAPNLGLPKSTIASGSEDGKVIIWTIGKEGEQWEGTVLKDF--KTPVWRVS 266
Query: 197 W-IDDETIVSTGQDANTRVW 253
W + + + + N VW
Sbjct: 267 WSLTGNLLAVSDGNNNVTVW 286
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 50 VNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIV-ST 226
+N V +S + S D I ++ I NAH +S++T + D+ V S+
Sbjct: 177 INQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSS 236
Query: 227 GQDANTRVWTV 259
G+D+ ++W +
Sbjct: 237 GKDSTVKLWEI 247
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV 130
H + V C +SPD A+G DT+I ++ V
Sbjct: 30 HKSVVRCARFSPDGMFFATGGADTSIKLFEV 60
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 50 VNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIV-ST 226
+N V +S + S D I ++ I NAH +S++T + D+ V S+
Sbjct: 269 INQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSS 328
Query: 227 GQDANTRVWTV 259
G+D+ ++W +
Sbjct: 329 GKDSTVKLWEI 339
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV 130
H + V C +SPD A+G DT+I ++ V
Sbjct: 122 HKSVVRCARFSPDGMFFATGGADTSIKLFEV 152
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 31.5 bits (68), Expect = 0.58
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +2
Query: 77 SKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTGQDANTRVW 253
+ R+ SGS+D TI VWS+D + + H ++ + W D+ ++S D ++W
Sbjct: 284 ANRLYSGSMDKTIKVWSLDNLQCIQTLTD-HSSVVMSLICW--DQFLLSCSLDNTVKIW 339
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 31.5 bits (68), Expect = 0.58
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 65 WSPDSKRVASGSLDTTIIVWSVDQPSK 145
++PD K V SGS D T+ W+++ PS+
Sbjct: 252 FTPDGKYVLSGSGDGTLHAWNIENPSE 278
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 31.5 bits (68), Expect = 0.58
Identities = 21/76 (27%), Positives = 33/76 (43%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
H V V P +V +GS DTTI W D T+ H + + +T E
Sbjct: 301 HDNTVCSVFTRPTDPQVVTGSHDTTIKFW--DLRYGKTMSTLTHHKKSVRAMTLHPKENA 358
Query: 218 VSTGQDANTRVWTVPK 265
++ NT+ +++PK
Sbjct: 359 FASASADNTKKFSLPK 374
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/72 (20%), Positives = 28/72 (38%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
H + V C+A P + +G D+ VW + + + H + + T D +
Sbjct: 259 HLSGVYCLALHPTLDVLLTGGRDSVCRVWDI-RTKMQIFALSGHDNTVCSVFTRPTDPQV 317
Query: 218 VSTGQDANTRVW 253
V+ D + W
Sbjct: 318 VTGSHDTTIKFW 329
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 31.5 bits (68), Expect = 0.58
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Frame = +2
Query: 47 RVNCVAWSPDSKRVASGSLDTTIIVWSVDQPS--KHTIIKNAHPQSQITGLTWIDDETIV 220
++N W P ++ + SG D I +W + K + + H ++ IT L D++
Sbjct: 177 KINRAVWGPLNQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEA-ITSLCKAADDSHF 235
Query: 221 STG-QDANTRVW-----TVPKA*TT--PFNDAIMF*FRPHVII 325
TG D ++W T+ K TT P N M HV++
Sbjct: 236 LTGSHDKTAKLWDMRTLTLIKTYTTVVPVNAVAMSPLLNHVVL 278
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 31.5 bits (68), Expect = 0.58
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
H+ ++ + ++PD + V SG LD + VW D + + + + I L + E +
Sbjct: 141 HSRGISTIRFTPDGRWVVSGGLDNVVKVW--DLTAGKLLHEFKFHEGPIRSLDFHPLEFL 198
Query: 218 VSTGQ-DANTRVW 253
++TG D + W
Sbjct: 199 LATGSADRTVKFW 211
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/72 (26%), Positives = 31/72 (43%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
H + + V + P + +ASGS D + +W + + K H + T D +
Sbjct: 99 HRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYK-GHSRGISTIRFTPDGRWV 157
Query: 218 VSTGQDANTRVW 253
VS G D +VW
Sbjct: 158 VSGGLDNVVKVW 169
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWID-DET 214
HT+ V+ VA+ V +G+ I +W V++ +K H +S + + + E
Sbjct: 57 HTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEE-AKMVRAFTGH-RSNCSAVEFHPFGEF 114
Query: 215 IVSTGQDANTRVWTVPK 265
+ S DAN ++W + K
Sbjct: 115 LASGSSDANLKIWDIRK 131
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 31.1 bits (67), Expect = 0.76
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Frame = +2
Query: 32 GFHTARVNCVAWSPDSKRVASGSLDTTIIVW------SVDQPSKHTIIK--NAHPQSQIT 187
GFH + V WS D +ASG+ D TI ++ SVD PS ++K AH + +
Sbjct: 240 GFHDRTIYSVHWSRDGV-IASGAGDDTIQLFVDSDSDSVDGPSYKLLVKKEKAH-EMDVN 297
Query: 188 GLTWIDD 208
+ W D
Sbjct: 298 SVQWAPD 304
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 38 HTARVNCVAWSP-DSKRVASGSLDTTIIVWSV 130
H V C+ +SP D SGSLD I +WS+
Sbjct: 545 HNDYVTCIQFSPVDENYFLSGSLDAKIRIWSI 576
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 4/35 (11%)
Frame = +2
Query: 38 HTARVNCVAWSPD----SKRVASGSLDTTIIVWSV 130
HT V VAW+P+ +ASGS D +I+W+V
Sbjct: 209 HTDWVRDVAWAPNLGLPKSTIASGSQDGKVIIWTV 243
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 31.1 bits (67), Expect = 0.76
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTI-IKNAHPQSQITGLTWIDDET 214
H VN ++ P + SG+ D + +W +++ + H + + + +
Sbjct: 203 HDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDI 262
Query: 215 IVSTGQDANTRVWTVPK 265
IVS +D + RVW K
Sbjct: 263 IVSNSEDKSIRVWDATK 279
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV 130
H V C ++ P V S SLD T+ VW +
Sbjct: 134 HNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHP-QSQITGLTW 199
H + +W+P + A+ S D T+ +WSV+ ++ I P S +T + W
Sbjct: 695 HKRIIWACSWNPFGHQFATSSRDKTVKIWSVENDARIKQILVLPPFGSSVTAVAW 749
Score = 27.9 bits (59), Expect = 7.1
Identities = 27/94 (28%), Positives = 37/94 (39%), Gaps = 20/94 (21%)
Frame = +2
Query: 38 HTARVNCVAWSPDSK-----------RVASGSLDTTIIVWSV-----DQPSKHTIIKNAH 169
H A VNC W P SK + SG D II+W + DQ +H +
Sbjct: 58 HKASVNCTHWLPTSKFAFKAKKLDRQYLLSGDSDGIIILWELSTLNNDQQWRHVLQLPLS 117
Query: 170 PQSQITGLT-WIDDET---IVSTGQDANTRVWTV 259
+ +T +T ++ ET S D VW V
Sbjct: 118 HKKGVTCITAYMVSETDAMFASASSDGVVNVWDV 151
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/60 (23%), Positives = 30/60 (50%)
Frame = +2
Query: 74 DSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTGQDANTRVW 253
+ KR+ + S+DTT +W +++ T + AH ++ + W + S D + R++
Sbjct: 144 EPKRLGTCSIDTTCTIWDIEKSVVETQL-IAH-DKEVHDIAWGEARVFASVSADGSVRIF 201
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/60 (23%), Positives = 30/60 (50%)
Frame = +2
Query: 74 DSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTGQDANTRVW 253
+ KR+ + S+DTT +W +++ T + AH ++ + W + S D + R++
Sbjct: 144 EPKRLGTCSIDTTCTIWDIEKSVVETQL-IAH-DKEVHDIAWGEARVFASVSADGSVRIF 201
>At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/60 (23%), Positives = 30/60 (50%)
Frame = +2
Query: 74 DSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTGQDANTRVW 253
+ KR+ + S+DTT +W +++ T + AH ++ + W + S D + R++
Sbjct: 144 EPKRLGTCSIDTTCTIWDIEKSVVETQL-IAH-DKEVHDIAWGEARVFASVSADGSVRIF 201
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/61 (21%), Positives = 26/61 (42%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
HT + A+ P+ + +A+G + +++W + + T +K T W E
Sbjct: 191 HTELITVFAFHPNQRILAAGDVTGRVLIWKDNGIGEFTSVKTEDDTESCTTFNWHSAEVT 250
Query: 218 V 220
V
Sbjct: 251 V 251
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +2
Query: 47 RVNCVAWSPDSKRVASGSLDTTIIVWSVDQPS--KHTIIKNAHPQSQITGLTWIDDETIV 220
R+N W P ++ + SG D I +W + K + + H + IT L D++
Sbjct: 150 RINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGH-KKDITSLCKAADDSHF 208
Query: 221 STGQ-DANTRVW 253
TG D ++W
Sbjct: 209 LTGSLDKTAKLW 220
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +2
Query: 47 RVNCVAWSPDSKRVASGSLDTTIIVWSVDQPS--KHTIIKNAHPQSQITGLTWIDDETIV 220
R+N W P ++ + SG D I +W + K + + H + IT L D++
Sbjct: 150 RINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGH-KKDITSLCKAADDSHF 208
Query: 221 STGQ-DANTRVW 253
TG D ++W
Sbjct: 209 LTGSLDKTAKLW 220
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +2
Query: 47 RVNCVAWSPDSKRVASGSLDTTIIVWSVDQPS--KHTIIKNAHPQSQITGLTWIDDETIV 220
R+N W P ++ + SG D I +W + K + + H + IT L D++
Sbjct: 150 RINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGH-KKDITSLCKAADDSHF 208
Query: 221 STGQ-DANTRVW 253
TG D ++W
Sbjct: 209 LTGSLDKTAKLW 220
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 8 KLAHNKEWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVD 133
KL + + T R V WS D++R+ SGS D I W +
Sbjct: 187 KLTYYRSLPRVTGRALSVTWSADAQRIFSGSSDGLIRCWDAN 228
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLD-TTIIVWSVDQPSKHTII---KNAHPQSQITGLTW-- 199
H ++NCV W P + S+D I +WS+D K + +A ++G W
Sbjct: 119 HVGKINCVLWWPSGRCDKLISIDEQNIFLWSLDCSKKSAEVLSKDSAGMLHSLSGGAWDP 178
Query: 200 IDDETIVSTGQDANTRVW 253
D + +TG +++ + W
Sbjct: 179 HDVNAVAATG-ESSVQFW 195
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVW---SVDQPSKHTI 154
H V+CV ++P + SGS D T+ +W SV+ P + +
Sbjct: 264 HHGPVHCVRYAPGGESYTSGSEDGTVRIWVVGSVNHPEESNL 305
>At5g50650.1 68418.m06276 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 68 SPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWI-DDETIVSTGQDANT 244
S D K +A G+L+ +++ + + I+K AH +T LT+ D +VS D+
Sbjct: 284 SADGKLLAVGTLEGDVLIIDSTKMQTNQIVKKAH-LGLVTALTFSPDSRCLVSVSFDSRA 342
Query: 245 RVWTV 259
R+ +
Sbjct: 343 RLTVI 347
>At5g50550.1 68418.m06260 WD-40 repeat family protein / St12p
protein, putative contains 4 WD-40 repeats (PF0400);
similar to St12p protein GI:166878 [Arabidopsis
thaliana]
Length = 383
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 68 SPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWI-DDETIVSTGQDANT 244
S D K +A G+L+ +++ + + I+K AH +T LT+ D +VS D+
Sbjct: 284 SADGKLLAVGTLEGDVLIIDSTKMQTNQIVKKAH-LGLVTALTFSPDSRCLVSVSFDSRA 342
Query: 245 RVWTV 259
R+ +
Sbjct: 343 RLTVI 347
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 68 SPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWID-DETIVSTGQDANT 244
SPD VA+GS D ++ VWS+ + + +I+K S I +W + + S ++
Sbjct: 454 SPDDDYVAAGSADGSVHVWSLSKGNIVSILK--EQTSPILCCSWSGIGKPLASADKNGYV 511
Query: 245 RVWT 256
WT
Sbjct: 512 CTWT 515
Score = 27.9 bits (59), Expect = 7.1
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKR-VASGSLDTTIIVWSVDQP-SKHTIIKNAHPQSQITGLTWIDDE 211
HT +V V S S R V S + D TI +W + + +T++ ++ + ID
Sbjct: 314 HTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAICLS---IDGL 370
Query: 212 TIVSTGQDANTRVWTV 259
T+ S D N R+W +
Sbjct: 371 TVFSGHMDGNLRLWDI 386
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/74 (25%), Positives = 31/74 (41%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
H R+ V +S + V + S D T+ +W++ S + H S + D
Sbjct: 540 HKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFE-GHTSSVLRASFITDGTQF 598
Query: 218 VSTGQDANTRVWTV 259
VS G D ++W V
Sbjct: 599 VSCGADGLLKLWNV 612
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQS--QITGLTWIDDE 211
H VN V+++ + + SGS D +++W + + H + Q + + DD
Sbjct: 58 HKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMPFSDDR 117
Query: 212 TIVSTGQDANTR 247
TIV+ D R
Sbjct: 118 TIVTCAADGMVR 129
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/75 (22%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAH-PQSQITGLTWIDDET 214
H V+ + + + + SGS D T+ +W+ + T I++ QS++ + + E
Sbjct: 262 HCGIVSSLCFREGTAELFSGSYDGTLSIWNAEH---RTYIESCFGHQSELLSIDALGRER 318
Query: 215 IVSTGQDANTRVWTV 259
++S G+D +++ V
Sbjct: 319 VLSVGRDRTMQLYKV 333
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/60 (23%), Positives = 30/60 (50%)
Frame = +2
Query: 74 DSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTGQDANTRVW 253
+ +R+ + S+DTT +W +++ T + AH ++ + W S +D + RV+
Sbjct: 147 EPRRIGTSSIDTTCTIWDIEREVVDTQL-IAH-DKEVYDIAWGGVGVFASVSEDGSVRVF 204
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 3 SSSWPTTRSGASTPRASTAWPGARTLSASLRARSTPPSSSGALTSHPSTRSLRMP 167
++S PTT + S + + P T SA +TP S S A +S P++R P
Sbjct: 252 TASKPTTSTARSAGSVTRSTPSTTTKSAGPSRSTTPLSRSTARSSTPTSRPTLPP 306
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +2
Query: 68 SPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTW--IDDETIVSTGQDAN 241
S D K + + SL +W V Q + ++ H + +T + + +DDE + + D
Sbjct: 72 SRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKE-HVTDVVFSSVDDECLATASTDRT 130
Query: 242 TRVW 253
++W
Sbjct: 131 EKIW 134
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +2
Query: 2 EFKLAHNKEWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPS--KHTIIKNAHPQ 175
+F G H V CV +S + +V +GS D TI W S + T I
Sbjct: 84 DFNAGKEDVLGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWDPRGASGTERTQIGTYMQP 143
Query: 176 SQITGLTWIDDETIVST-GQDAN 241
++ L+ + + +V+T G+ N
Sbjct: 144 ERVNSLSLVGNRLVVATAGRHVN 166
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 44 ARVNCVAWSPDSKRV-ASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIV 220
A V CV +S S + A GS D + + + H ++ ++ + ++D ETIV
Sbjct: 851 ANVCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKA-VSYVKFMDSETIV 909
Query: 221 STGQDANTRVWTVPK 265
S D + ++W + K
Sbjct: 910 SASTDNSLKLWNLNK 924
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 56 CVAWSPDSKRVASGSLDTTIIVWSVD 133
C AWS D K + +G D + VWS++
Sbjct: 350 CCAWSMDGKYLLTGGEDDLVQVWSME 375
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVW 124
H V+CV ++P ASGS D TI +W
Sbjct: 269 HHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVW 124
H V+CV ++P ASGS D TI +W
Sbjct: 269 HHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 1/80 (1%)
Frame = +2
Query: 17 HNK-EWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGL 193
H K W H V+ +A S D + S S D + +W I+ AH + I +
Sbjct: 183 HKKCTWVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDA-INAI 241
Query: 194 TWIDDETIVSTGQDANTRVW 253
D + + D +VW
Sbjct: 242 VVSKDGFVYTGSADKKIKVW 261
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV-DQPSKHT 151
HT+RV +A SP+ VAS + D + +W+V +P K T
Sbjct: 385 HTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGEPPKTT 423
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 50 VNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTG 229
+N + W S V + +L T+ +W S ++ + +T + W D ++ G
Sbjct: 126 LNLLDWG--SANVLAIALGDTVYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVG 183
Query: 230 QD-ANTRVW 253
D + ++W
Sbjct: 184 LDNSEVQLW 192
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVW-----SVDQPSKHTIIKNAHPQSQITGLTWI 202
HT V + WS K++ASG + +W + +P++ + + + + L W
Sbjct: 248 HTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRALAWC 307
Query: 203 D-DETIVSTG 229
T+++TG
Sbjct: 308 PFQATLLATG 317
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV-DQPSKHT 151
HT+RV +A SP+ VAS + D + +W+V +P K T
Sbjct: 387 HTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGEPPKTT 425
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 50 VNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTG 229
+N + W S V + +L T+ +W S ++ + +T + W D ++ G
Sbjct: 129 LNLLDWG--SANVLAIALGDTVYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVG 186
Query: 230 QD-ANTRVW 253
D + ++W
Sbjct: 187 LDNSEVQLW 195
>At5g01280.1 68418.m00037 expressed protein
Length = 460
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 9 SWPTTRSGASTPRASTAWPGARTLSASLRARSTPPSSSGALTSHPSTRSLRMPIP 173
S PT+R+ ++T RA+ + + ++S R+ S P SSSG TS + + R P
Sbjct: 112 STPTSRATSTTTRATLT---SSSTTSSTRSWSRPSSSSGTGTSRVTLTAARATRP 163
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 47 RVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIK 160
+V + W+P+ R+ S S D +IVW+ K IK
Sbjct: 5 QVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIK 42
Score = 28.7 bits (61), Expect = 4.1
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWS 127
H R++C+ S D + +GS D+ + +W+
Sbjct: 278 HRNRISCLGLSADGSALCTGSWDSNLKIWA 307
>At4g24450.1 68417.m03505 starch excess protein-related similar to
SEX1 [Arabidopsis thaliana] GI:12044358
Length = 1284
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = -3
Query: 595 PAVIIVPRVTPRSEVSLNKVA*VTPYIISYLS-VKVPSKSVQSFQ 464
P VII +VT E+ VA +TP +I LS V + +++ ++F+
Sbjct: 854 PTVIIASKVTGEEEIPAGVVAVLTPSMIDVLSHVSIRARNSKAFR 898
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 56 CVAWSPDSKRVASGSLDTTIIVWSVD 133
C +WS D K + +G D + VWS++
Sbjct: 350 CCSWSMDGKYILTGGEDDLVQVWSME 375
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 29.5 bits (63), Expect = 2.3
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +3
Query: 6 SSWPTTRSGASTPRA--STAWPGARTLSASLRARSTPPSSSGALTSHPSTRSLRMPIPKV 179
SS PT+R+ + RA STA P T S+ +TP S+ +S S + + P
Sbjct: 186 SSTPTSRATLTAARATTSTAAPRTTTTSSGSARSATPTRSNPRPSSASSKKPVSRPATPT 245
Query: 180 R*P 188
R P
Sbjct: 246 RRP 248
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV 130
H + V C + S + V SGS D TI VW +
Sbjct: 894 HKSTVTCFSLSETGECVLSGSADKTIRVWQI 924
>At2g38020.1 68415.m04667 vacuoleless1 (VCL1) contains Pfam
profiles: PF04841 Vps16, N-terminal region, PF04840:
Vps16, C-terminal region; identical to cDNA VCL1 (VCL1)
GI:13877132
Length = 858
Score = 29.5 bits (63), Expect = 2.3
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +2
Query: 167 HPQSQITGLTWIDDETIVSTGQD 235
HP ++ G++W DD+T++ QD
Sbjct: 85 HPGGRLIGMSWSDDQTLICIVQD 107
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +2
Query: 62 AWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTGQDAN 241
AW P+ +A+G+ DT +W + PS+ + + I GL + + ++ + A+
Sbjct: 297 AWHPNGLILATGNQDTACRLWDIRNPSESFAVLKGN-MGAIRGLKFTPEGRFLAMAEPAD 355
>At5g50970.1 68418.m06321 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 512
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +2
Query: 62 AWSPDSKRVASGSLDTTIIVWSVD-QPSKHTIIKNAHPQSQITGLTW-IDDETIVSTGQD 235
+WSPD + SGS+D I V+ + K T AH Q ++ W ++S D
Sbjct: 445 SWSPDGLYITSGSVDPVIHVFDIRYNARKPTQSIKAH-QKRVFKAEWHYSQPLLISISSD 503
Query: 236 AN 241
N
Sbjct: 504 LN 505
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 32 GFHTARVNCVAWSPDS-KRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDD 208
G + V CV + P VA G D V+ + + + H ++ ++ + ++D
Sbjct: 66 GICRSAVCCVEFDPSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGHTKT-VSYVRFLDG 124
Query: 209 ETIVSTGQDANTRVWTV 259
T+V+ G D ++W+V
Sbjct: 125 GTVVTAGTDGCLKLWSV 141
>At4g08540.1 68417.m01405 expressed protein
Length = 473
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -1
Query: 75 SGLQATQLTRAVWKPHSLLWASL 7
SG QA QL +++W HS++ +SL
Sbjct: 380 SGKQAQQLNKSIWNAHSVISSSL 402
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
H+A V V P +K S SLD T + + S + + T + D I
Sbjct: 308 HSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLI 367
Query: 218 VSTGQDAN-TRVWTV 259
+ TG + ++W V
Sbjct: 368 LGTGTSQSVVKIWDV 382
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
H+A V V P +K S SLD T + + S + + T + D I
Sbjct: 308 HSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGLI 367
Query: 218 VSTGQDAN-TRVWTV 259
+ TG + ++W V
Sbjct: 368 LGTGTSQSVVKIWDV 382
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV 130
H++ V+ V WSP+ + VAS S D + +WS+
Sbjct: 674 HSSNVHSVCWSPNGELVASVSED-AVKLWSL 703
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPS--KHTIIKNAHPQSQI 184
H + V + P+S ++A+ S D TI +W P TI +A P I
Sbjct: 549 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSI 599
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV 130
H++ V+ V WSP+ + VAS S D + +WS+
Sbjct: 676 HSSNVHSVCWSPNGELVASVSED-AVKLWSL 705
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPS--KHTIIKNAHPQSQI 184
H + V + P+S ++A+ S D TI +W P TI +A P I
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSI 601
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV 130
H++ V+ V WSP+ + VAS S D + +WS+
Sbjct: 676 HSSNVHSVCWSPNGELVASVSED-AVKLWSL 705
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPS--KHTIIKNAHPQSQI 184
H + V + P+S ++A+ S D TI +W P TI +A P I
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSI 601
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV 130
H++ V+ V WSP+ + VAS S D + +WS+
Sbjct: 676 HSSNVHSVCWSPNGELVASVSED-AVKLWSL 705
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPS--KHTIIKNAHPQSQI 184
H + V + P+S ++A+ S D TI +W P TI +A P I
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSI 601
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSV 130
H++ V+ V WSP+ + VAS S D + +WS+
Sbjct: 676 HSSNVHSVCWSPNGELVASVSED-AVKLWSL 705
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPS--KHTIIKNAHPQSQI 184
H + V + P+S ++A+ S D TI +W P TI +A P I
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSI 601
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 6/72 (8%)
Frame = +2
Query: 56 CVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTI---IKNAHPQSQITGLTWIDDE---TI 217
C +W+ R+A+GSL+ + ++ S T K +S I + W+ E +
Sbjct: 14 CSSWNQSGDRLAAGSLNGKLSIYESSTSSSSTFSCTSKVRVSESSIVKIVWLPSEYGDAV 73
Query: 218 VSTGQDANTRVW 253
+D + +W
Sbjct: 74 ACVCEDGSLSIW 85
>At1g12910.1 68414.m01499 flower pigmentation protein (AN11)
contains 3 WD-40 repeats (PF00400); identical to
GB:AAC18912 from [Arabidopsis thaliana] (Genes Dev. 11
(11), 1422-1434 (1997))
Length = 346
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +2
Query: 74 DSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTGQDANTRVW 253
+ +R+ + S DTT +W +++ + T + AH ++ + W S D + RV+
Sbjct: 147 EPRRIGTSSTDTTCTIWDIEREAVDTQL-IAH-DKEVFDIAWGGVGVFASVSADGSVRVF 204
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 50 VNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQS-QITGLTWIDD 208
V + W PD K +A G D TI + V+ +++N P + L W +D
Sbjct: 67 VTSLCWRPDGKAIAVGLEDGTISLHDVENGK---LLRNLKPHDVAVVCLNWEED 117
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
H V+C++ + + + SGS D T+ VW + SK AH + T DD +
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSD-SKCLESIQAHDDAINTVAAGFDD--L 304
Query: 218 VSTGQ-DANTRVW 253
+ TG D +VW
Sbjct: 305 LFTGSADGTLKVW 317
>At4g08670.1 68417.m01428 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein contains Pfam
protease inhibitor/seed storage/LTP family domain
PF00234
Length = 208
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +3
Query: 27 SGASTPRASTAWPGARTLSASLRARSTPPSSSGALTSHPSTRSLRMPIP 173
SGA+TP AS P A + S A +P +S+ + S T S+ P P
Sbjct: 130 SGATTPGASPVSPSAGAPTTSPSAAKSPETSATS-PSSDETPSMTAPSP 177
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVD 133
H + V + +SP+S+++ + S D +I VW+++
Sbjct: 288 HKSAVTWLCFSPNSEQIITASKDGSIRVWNIN 319
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Frame = +2
Query: 77 SKRVASGSLDTTIIVWSV---DQPSKHTIIK--NAHPQSQITGLTWID--DETIVSTGQD 235
S +ASG+ D I +W + +PS ++K + Q +I+ ++W + + ST +
Sbjct: 135 SNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYN 194
Query: 236 ANTRVWTVPK 265
T +W + K
Sbjct: 195 GTTVIWDLRK 204
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Frame = +2
Query: 77 SKRVASGSLDTTIIVWSV---DQPSKHTIIK--NAHPQSQITGLTWID--DETIVSTGQD 235
S +ASG+ D I +W + +PS ++K + Q +I+ ++W + + ST +
Sbjct: 135 SNLLASGADDGEICIWDLLKPSEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYN 194
Query: 236 ANTRVWTVPK 265
T +W + K
Sbjct: 195 GTTVIWDLRK 204
>At3g26740.1 68416.m03343 light responsive protein-related similar
to light regulated protein precursor SP:Q03200 [Oryza
sativa] (Plant Mol. Biol. 22 (1), 165-170 (1993)), ccr
protein GB:S52663 [Citrus X paradisi] (Plant Mol. Biol.
26 (1), 165-173 (1994))
Length = 141
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 27 SGASTPRASTAWPGARTLSASLRARSTPPSSSGALTSHPST 149
S S+P+ + P A S RS SSS +LTS P+T
Sbjct: 17 SSVSSPKLTFLLPHATKASRLSSLRSNNSSSSSSLTSDPNT 57
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/71 (19%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 50 VNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWID-DETIVST 226
+ CVA++ +A+G D ++W + I++ + IT ++W ++ +
Sbjct: 26 IKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVS 85
Query: 227 GQDANTRVWTV 259
D + +W V
Sbjct: 86 AADKSLTLWDV 96
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQ 175
H+ V +S +++ +AS SLD TI VW + + +I PQ
Sbjct: 215 HSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYGISPQ 260
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +2
Query: 62 AWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETIVSTGQDAN 241
AW P+ + +A+G+ DTT +W V S+ + + I L + D ++ + A+
Sbjct: 326 AWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGN-MGAIRALRFTSDGRFLAMAEPAD 384
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Frame = +2
Query: 59 VAWSPDSKR-VASGSLDTTIIVWSVDQPSKHTIIKNAH----PQSQITGLTW-IDDETIV 220
+AWS + + SGS D I +W V + ++ H QS I + W + +E I
Sbjct: 175 LAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIF 234
Query: 221 -STGQDANTRVW 253
S G D +W
Sbjct: 235 GSAGDDCQLVIW 246
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 38 HTARVNCVAW-SPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITG 190
H+ RV +A+ + D +AS SLD + VW + + S+ QSQITG
Sbjct: 220 HSQRVTDMAFFAEDVHLLASVSLDGKVFVWKISEGSE------GDEQSQITG 265
>At3g10650.1 68416.m01281 expressed protein
Length = 1309
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 9 SWPTTRSGASTPRASTAWPGARTLSASLRARSTPPSSSGALTSHPS 146
++ + SGA + ++ SA A TPP S+G+LTS PS
Sbjct: 726 TFSNSASGAESSTSAAPTLNGSIFSAGANA-VTPPPSNGSLTSSPS 770
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +3
Query: 9 SWPTTRSGASTPRASTAWPGARTLSASLRARSTPPSSSGALTSHPSTRS 155
S P+ S TP + P T S + TPP + G+ SHPST S
Sbjct: 71 SHPSPPSHTPTPSTPSHTPTPHTPSHTPTPH-TPPCNCGSPPSHPSTPS 118
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +3
Query: 9 SWPTTRSGASTPRASTAWPGARTLSASLRARSTPPSSSGALTSHPSTRS 155
S P+ S TP + P T S + TPP + G+ SHPST S
Sbjct: 71 SHPSPPSHTPTPSTPSHTPTPHTPSHTPTPH-TPPCNCGSPPSHPSTPS 118
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 26 EWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVD 133
E+ HT V ++ + +ASGS D ++ +W V+
Sbjct: 418 EYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVE 453
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 27.9 bits (59), Expect = 7.1
Identities = 20/84 (23%), Positives = 33/84 (39%)
Frame = +2
Query: 2 EFKLAHNKEWGFHTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQ 181
E K W H V+C++ + + + S S D TI VW + SK AH +
Sbjct: 193 EVKKHRTALWIKHADAVSCLSLNDEQGLLYSASWDRTIKVWRI-ADSKCLESIPAHDDA- 250
Query: 182 ITGLTWIDDETIVSTGQDANTRVW 253
+ + + + S D + W
Sbjct: 251 VNSVVSTTEAIVFSGSADGTVKAW 274
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQP---SKHTIIKNAHPQ-SQITGL 193
H VN V S V SGS D T+ W DQ +KHT+++ Q S +T L
Sbjct: 247 HDDAVNSVV-STTEAIVFSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTAL 301
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 27.5 bits (58), Expect = 9.4
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
H V+ ++ + + S S DTTI VW + SK +AH + + ++ DD +
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRI-ADSKCLESIHAHDDAINSVMSGFDD--L 290
Query: 218 VSTGQ-DANTRVW 253
V TG D +VW
Sbjct: 291 VFTGSADGTVKVW 303
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 32 GFHTARVNCVAWSPDSKRVASGSLDTTIIVW 124
G H V CV +S + +V +GS D T+ W
Sbjct: 95 GTHDKAVRCVEYSYAAGQVITGSWDKTVKCW 125
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/72 (25%), Positives = 28/72 (38%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
H V C+A P V +G D+ VW D +K I H + L D +
Sbjct: 253 HLHGVYCLALHPTLDVVLTGGRDSVCRVW--DIRTKMQIFVLPHDSDVFSVLARPTDPQV 310
Query: 218 VSTGQDANTRVW 253
++ D+ + W
Sbjct: 311 ITGSHDSTIKFW 322
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/72 (23%), Positives = 31/72 (43%)
Frame = +2
Query: 38 HTARVNCVAWSPDSKRVASGSLDTTIIVWSVDQPSKHTIIKNAHPQSQITGLTWIDDETI 217
HT V V + + SGS D ++ +W + ++ P + T + + +
Sbjct: 83 HTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVSPVN--TVVLHPNQTEL 140
Query: 218 VSTGQDANTRVW 253
+S Q+ N RVW
Sbjct: 141 ISGDQNGNIRVW 152
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 62 AWSPDSKRVASGSLDTTIIVWSVDQPSKHTII 157
AW PD ++G+ D T VW + SK +
Sbjct: 324 AWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAV 355
>At1g31290.1 68414.m03829 PAZ domain-containing protein / piwi
domain-containing protein contains Pfam profiles
PF02170: PAZ domain, PF02171: Piwi domain
Length = 1194
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/41 (39%), Positives = 18/41 (43%)
Frame = -3
Query: 187 GYLTLGMGILNDRVLGWLVNAPDDDGGVERARSDALRVRAP 65
GY G G + DR GW VN GG R R L+ P
Sbjct: 99 GYSGRGRGFVQDRDGGW-VNPGQSSGGHVRGRGTQLQQPPP 138
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +2
Query: 38 HTARVNCVAWSPDSK-RVASGSLDTTIIVWSVDQP-SKHTIIKNAHPQSQITGLTWIDDE 211
H V V ++P + + S D T+ +W++D+P S T ++A+ Q D
Sbjct: 105 HAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGD- 163
Query: 212 TIVSTGQDANTRVWTV 259
S D R+W V
Sbjct: 164 VFASASGDCTLRIWDV 179
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,629,428
Number of Sequences: 28952
Number of extensions: 290469
Number of successful extensions: 1265
Number of sequences better than 10.0: 181
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1555552968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -