Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0728
         (467 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2SDD7 Cluster: Glycosyltransferase involved in cell wa...    34   1.8  
UniRef50_A6S8L4 Cluster: Predicted protein; n=2; Botryotinia fuc...    34   1.8  
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    33   2.4  
UniRef50_Q1CYH6 Cluster: Putative membrane protein; n=2; Cystoba...    32   5.4  
UniRef50_UPI0001552FCD Cluster: PREDICTED: hypothetical protein;...    32   7.2  
UniRef50_A3EQW4 Cluster: Putative uncharacterized protein; n=1; ...    32   7.2  

>UniRef50_A2SDD7 Cluster: Glycosyltransferase involved in cell wall
           biogenesis-like protein; n=1; Methylibium petroleiphilum
           PM1|Rep: Glycosyltransferase involved in cell wall
           biogenesis-like protein - Methylibium petroleiphilum
           (strain PM1)
          Length = 529

 Score = 33.9 bits (74), Expect = 1.8
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = -1

Query: 131 FAPRIAK---PCWWGFSPHRQHTRPVPEGTSSNGRIIRPSPNPT 9
           FAPR+ +   P W+G  P R+  +P     SS G+  R  P PT
Sbjct: 326 FAPRLQQRRPPAWYGLLPARRAGQPGLAARSSQGQAARRPPKPT 369


>UniRef50_A6S8L4 Cluster: Predicted protein; n=2; Botryotinia
           fuckeliana B05.10|Rep: Predicted protein - Botryotinia
           fuckeliana B05.10
          Length = 1029

 Score = 33.9 bits (74), Expect = 1.8
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -3

Query: 174 HSYSLVGAIQ*PRDFCSKDSQAMLVGLLPPSSAH-PARPGRDVKQWTNYTPVAQSH 10
           HS S   + + P ++CS D  +  +  + P   H PA+  R +KQW  +  V  +H
Sbjct: 449 HSSSTEPSTKRPCEYCSVDVSSAWIASVKPRKIHDPAKAPRLLKQWIQFKSVCFNH 504


>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 33.5 bits (73), Expect = 2.4
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +3

Query: 426 RGGARYPIRPIVSR 467
           RGGARYPIRPIVSR
Sbjct: 260 RGGARYPIRPIVSR 273


>UniRef50_Q1CYH6 Cluster: Putative membrane protein; n=2;
           Cystobacterineae|Rep: Putative membrane protein -
           Myxococcus xanthus (strain DK 1622)
          Length = 1848

 Score = 32.3 bits (70), Expect = 5.4
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 93  EAPPAWLGYPWSKSHAVIESPPLKNRSARII 185
           EAPP WL  P + +    E PP ++ +AR++
Sbjct: 193 EAPPVWLPLPANPAEPYAEPPPARSLTARLV 223


>UniRef50_UPI0001552FCD Cluster: PREDICTED: hypothetical protein;
           n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
           Mus musculus
          Length = 61

 Score = 31.9 bits (69), Expect = 7.2
 Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
 Frame = -1

Query: 107 CWWG---FSPHRQHTRPVPEGTSSNGR 36
           CWWG    SPH Q  RP P   S+ GR
Sbjct: 10  CWWGQTLCSPHPQFPRPCPSSGSTLGR 36


>UniRef50_A3EQW4 Cluster: Putative uncharacterized protein; n=1;
           Leptospirillum sp. Group II UBA|Rep: Putative
           uncharacterized protein - Leptospirillum sp. Group II
           UBA
          Length = 165

 Score = 31.9 bits (69), Expect = 7.2
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
 Frame = -2

Query: 187 PIILALLFFSGGDSMTA*LLLQG*PSHAGGASPPIVSTPGPSRKGRQAMDELY---ARRP 17
           P++  L+ F+GGD++T   +      HA     P+  +P    + R  +D+ Y     R 
Sbjct: 38  PVVFFLITFTGGDTLTYIYMRNWVTDHALMNRMPVTWSPEKKAEARNVLDQFYDAGRARK 97

Query: 16  IPRT 5
           +P T
Sbjct: 98  VPST 101


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,883,180
Number of Sequences: 1657284
Number of extensions: 9410150
Number of successful extensions: 26260
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 25121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26241
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25610991215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)