Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0728
         (467 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_6983| Best HMM Match : rve (HMM E-Value=0.011)                      27   5.9  
SB_59449| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.7  
SB_14574| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.7  
SB_9096| Best HMM Match : Acid_phosphat_A (HMM E-Value=0.18)           27   7.7  

>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
          Length = 251

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 80  QHTRPVPEGTSSNGRIIRPSPNPT 9
           +HT+   E T+SNG+  R +P+PT
Sbjct: 66  RHTKTPTEHTASNGKAERCTPHPT 89


>SB_59449| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 247

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -1

Query: 83  RQHTRPVPEGTSSNGRIIRPSPNPTN 6
           RQ  RPVP+ T       RP P+PT+
Sbjct: 157 RQGPRPVPDPTDGQRPSPRPVPHPTD 182


>SB_14574| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 124

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -1

Query: 83  RQHTRPVPEGTSSNGRIIRPSPNPTN 6
           RQ  RPVP+ T       RP P+PT+
Sbjct: 34  RQGPRPVPDPTDGQRPSPRPVPHPTD 59


>SB_9096| Best HMM Match : Acid_phosphat_A (HMM E-Value=0.18)
          Length = 417

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = +2

Query: 122 LEQKSRGH*IAPTKE*ECQNYWSIGPGTDPIDPSTWLN*IK 244
           +E  S+G      K+    N WS GPG D +  S  +N +K
Sbjct: 297 MESSSQGKHQQNKKQNIITNTWSQGPGNDSVTSSESMNNVK 337


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,239,091
Number of Sequences: 59808
Number of extensions: 286184
Number of successful extensions: 624
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 969807871
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)