Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0727
         (735 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    26   1.4  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    25   2.4  
AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    25   2.4  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    24   4.2  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    24   5.6  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   9.8  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 723 GTTFMCSGCSGYCIR*SSNFNFSK 652
           G T  C+  SGY I  +SNFN  K
Sbjct: 501 GHTLECTSASGYSIVSTSNFNKHK 524


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -2

Query: 98  MVVIQIYSTVTLVKYNFISIFQVEYW 21
           + V  +  T+  V + FIS+F ++YW
Sbjct: 178 LAVGDLMMTLFCVPFTFISLFVLQYW 203


>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +2

Query: 596 WHYITQPSHLIRNHIFGDI--LEKLKLEDQRMQYPEQPEH 709
           W YI+ PS+     +F D+  L   K+++ + +  +QP +
Sbjct: 258 WKYISTPSYRKMMSVFDDLTALIMAKIDEAKQRLEKQPSN 297


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 295 LPFELRFIGTYLEELGKRDFQELRGAELRANNP 393
           LP+   ++G YL  LG +  Q+ +  +L   +P
Sbjct: 41  LPYSACYVGNYLFSLGLQQQQQQQQQQLLQQHP 73


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3

Query: 672 KINECNIQNSQN 707
           K  ECN+QNSQN
Sbjct: 501 KTCECNLQNSQN 512


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 15/56 (26%), Positives = 24/56 (42%)
 Frame = +1

Query: 208 VCKEDVVSWFKELESYKRIDAMCTLLNMCLPFELRFIGTYLEELGKRDFQELRGAE 375
           VC  +V  WF+EL+  + +    T         +R +   LE L +   Q +R  E
Sbjct: 161 VCTPEVQQWFEELKEKRSLQEKSTNQGAEGTARVRELEARLEAL-EAQLQSMRARE 215


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 834,981
Number of Sequences: 2352
Number of extensions: 18371
Number of successful extensions: 48
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)