Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0725
         (509 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    41   0.014
UniRef50_Q4RQU0 Cluster: Chromosome 2 SCAF15004, whole genome sh...    37   0.31 
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    36   0.71 
UniRef50_Q3UY09 Cluster: Adult male olfactory brain cDNA, RIKEN ...    33   3.8  
UniRef50_Q9HBQ9 Cluster: Putative uncharacterized protein; n=1; ...    33   5.0  
UniRef50_Q28RA2 Cluster: ComEC/Rec2-related protein; n=2; Rhodob...    32   6.6  
UniRef50_Q7P1J6 Cluster: Sensor protein; n=1; Chromobacterium vi...    32   8.7  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 41.1 bits (92), Expect = 0.014
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = -3

Query: 162 YVLHFFLLFK*VDDLTAYLVLSGYWSP 82
           + L  FLL + VD+LTA+LVLSGYWSP
Sbjct: 149 FCLSRFLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_Q4RQU0 Cluster: Chromosome 2 SCAF15004, whole genome
           shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 2
           SCAF15004, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 938

 Score = 36.7 bits (81), Expect = 0.31
 Identities = 18/58 (31%), Positives = 33/58 (56%)
 Frame = -1

Query: 221 HVRKREKKFAFPMQIFMSYNMYYIFFYCLNKWTISQPTWC*VVTGAHRHLRNKCATHL 48
           H++ R K+F+F   ++++  +Y+IF  C+    +S  +WC VV    RH+R   +  L
Sbjct: 162 HIKSRTKRFSFGPLLYLTGEIYFIFNLCI----MSASSWCTVVY-LSRHMRQMASQGL 214


>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 35.5 bits (78), Expect = 0.71
 Identities = 16/24 (66%), Positives = 16/24 (66%)
 Frame = +3

Query: 438 FNNXXXXXXTRGGARYPIRPIVSR 509
           FN        RGGARYPIRPIVSR
Sbjct: 250 FNQAYRYRRPRGGARYPIRPIVSR 273


>UniRef50_Q3UY09 Cluster: Adult male olfactory brain cDNA, RIKEN
           full-length enriched library, clone:6430562O12
           product:hypothetical protein, full insert sequence; n=1;
           Mus musculus|Rep: Adult male olfactory brain cDNA, RIKEN
           full-length enriched library, clone:6430562O12
           product:hypothetical protein, full insert sequence - Mus
           musculus (Mouse)
          Length = 133

 Score = 33.1 bits (72), Expect = 3.8
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +2

Query: 386 SPTCPGETGKASGPPVILQ*LKKKKKNSRGG 478
           S   PG  G+A+ PP+  Q  KKKKK  R G
Sbjct: 65  SQQVPGWIGEATSPPICYQKKKKKKKRGRAG 95


>UniRef50_Q9HBQ9 Cluster: Putative uncharacterized protein; n=1;
           Homo sapiens|Rep: Putative uncharacterized protein -
           Homo sapiens (Human)
          Length = 353

 Score = 32.7 bits (71), Expect = 5.0
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +2

Query: 449 KKKKKNSRGGPVPNS 493
           KKKKKNSRGGPVP +
Sbjct: 46  KKKKKNSRGGPVPGN 60


>UniRef50_Q28RA2 Cluster: ComEC/Rec2-related protein; n=2;
           Rhodobacteraceae|Rep: ComEC/Rec2-related protein -
           Jannaschia sp. (strain CCS1)
          Length = 706

 Score = 32.3 bits (70), Expect = 6.6
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = -2

Query: 424 P*GLSSFTRTGGRAKAQPEGVGFANSCSSASKGDLTTQE 308
           P GL   T   GRA ++P G GF       + GDL TQE
Sbjct: 540 PGGLVGLTTDQGRALSRPRGDGFVAGIWLENDGDLITQE 578


>UniRef50_Q7P1J6 Cluster: Sensor protein; n=1; Chromobacterium
           violaceum|Rep: Sensor protein - Chromobacterium
           violaceum
          Length = 428

 Score = 31.9 bits (69), Expect = 8.7
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +3

Query: 336 ALEQLLANPTPSG*AFARPPVLVKLERPQG 425
           ALE+LL+N   +   + RPPV+V+LE+  G
Sbjct: 314 ALERLLSNLLENARRYGRPPVIVRLEKAAG 343


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,905,973
Number of Sequences: 1657284
Number of extensions: 10692618
Number of successful extensions: 23471
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 22977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23469
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30946432294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)