Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0724
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    25   0.41 
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    23   1.6  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    23   1.6  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      23   1.6  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   1.6  
AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase l...    23   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.2  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   2.2  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   3.8  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   3.8  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   8.7  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   8.7  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 543 FSCTIPYKSPPVMWDPTLTFNGLNSQSTSL 454
           F   I    PP   +P +TFN LN   T L
Sbjct: 167 FLAIIACMGPPPQPEPPVTFNSLNGAHTPL 196


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 347 QDQVLLTKAFQYGVLDHLQLHLKFLRIPG 261
           +D VL+T  ++ G+L  L+   + L +PG
Sbjct: 125 EDVVLVTLNYRLGILGFLRFEDQSLGVPG 153


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 347 QDQVLLTKAFQYGVLDHLQLHLKFLRIPG 261
           +D VL+T  ++ G+L  L+   + L +PG
Sbjct: 127 EDVVLVTLNYRLGILGFLRFEDQSLGVPG 155


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 347 QDQVLLTKAFQYGVLDHLQLHLKFLRIPG 261
           +D VL+T  ++ G+L  L+   + L +PG
Sbjct: 125 EDVVLVTLNYRLGILGFLRFEDQSLGVPG 153


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 347 QDQVLLTKAFQYGVLDHLQLHLKFLRIPG 261
           +D VL+T  ++ G+L  L+   + L +PG
Sbjct: 127 EDVVLVTLNYRLGILGFLRFEDQSLGVPG 155


>AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase like
           protein E2 protein.
          Length = 134

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 347 QDQVLLTKAFQYGVLDHLQLHLKFLRIPG 261
           +D VL+T  ++ G+L  L+   + L +PG
Sbjct: 99  EDVVLVTLNYRLGILGFLRFEDQSLGVPG 127


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -3

Query: 214 IVTDTDQLVHSRSGHFFGSDDGSRY--GEDISE 122
           I+T TDQ V +R+   F  DD  RY  G ++S+
Sbjct: 13  ILTPTDQRVVTRTIPSFLRDDVERYPSGPELSD 45



 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 422  IPKGINVPSLAREVDW 469
            I  G +VP LA+ +DW
Sbjct: 1569 IDAGYDVPVLAQNLDW 1584



 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 422  IPKGINVPSLAREVDW 469
            +  G +VP+L++ +DW
Sbjct: 1994 VDAGYDVPTLSKYLDW 2009


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
 Frame = -1

Query: 372 PSKMEPK-IPGPSSTDKGFPVR--STGSPT 292
           P K  P+  P PSST    P +  ST +PT
Sbjct: 66  PWKKSPQGAPSPSSTPSSLPTQRTSTSNPT 95


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +3

Query: 498 DPTSPVEICMVLYMRTLWSSTGCWSRPKPREQLPISHRPGTTK 626
           D T PV++    +++    S G  S   P E LP+   PG  K
Sbjct: 314 DITEPVKV----FIQLRRPSDGATSEALPFELLPLDSEPGMLK 352


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -1

Query: 384 GR*IPSKMEPKIPGPSSTDKGFP 316
           GR  PS   P+I  PSST  G P
Sbjct: 63  GRKSPSS--PRISSPSSTKSGSP 83


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 564 CWSRPKPREQLPISHRP 614
           C SRPK +E  P  H P
Sbjct: 92  CTSRPKLQEPQPSQHCP 108


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -3

Query: 643 QHHVGDFVVPGRCDIGNCSLGFG 575
           Q   G+ + P   D G C  G+G
Sbjct: 356 QDDAGNLISPSINDDGTCGNGYG 378


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 540 RTLWSSTGCWSRPKPREQLPISHRPGTTKSP 632
           +TL  S+     P P+    ++ +P +TK+P
Sbjct: 380 QTLGGSSNEIVEPVPQPVEEVTQKPSSTKAP 410


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,729
Number of Sequences: 336
Number of extensions: 3683
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)