Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0724
(648 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 29 0.096
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 27 0.39
AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein. 27 0.51
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 25 2.7
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 24 3.6
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 24 3.6
AF364131-1|AAL35507.1| 378|Anopheles gambiae putative odorant r... 24 3.6
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 24 4.8
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 24 4.8
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 23 6.3
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 23 8.3
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 29.5 bits (63), Expect = 0.096
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = +2
Query: 401 ELTQSIYIPKGINVPSLAREVDWEFNPL--NVKVGSHITGGDLYGIVHENTLVKHRMLVP 574
E YIPKG + ++ ++ W P ++ SH GG I T K R
Sbjct: 697 EAKNDAYIPKGGDKKIISTKLQWNAKPKIGSLDNASHKPGGGDKRIESIKTDFKERAKPK 756
Query: 575 PKAKGTVTYIAPAGNYKVTDVVLE 646
+K +TY G+ K+ L+
Sbjct: 757 IGSKDNITYKPGGGDVKIVHQKLD 780
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 27.5 bits (58), Expect = 0.39
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = +2
Query: 365 FDGIQRPLKDINELTQSIYIPKGINVPSLAREVDWE 472
+DG Q L+ I+E+ ++ + G+++ V+W+
Sbjct: 171 YDGFQVDLRHIDEMNETNVVEVGVDLSEFYTSVEWD 206
>AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein.
Length = 786
Score = 27.1 bits (57), Expect = 0.51
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 212 NELVGEIIRLEGDMATIQVYEETSGVTVGDPVLRTGKPLSVEL 340
N GEI R+ D+ ++V +E+ T GDP + SVE+
Sbjct: 547 NTQTGEI-RISRDVRFLEVDDESKEQTYGDPKIEDNPTESVEI 588
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 24.6 bits (51), Expect = 2.7
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = -3
Query: 463 DLPGQGRHVDTLGDVDGLSQLVDVLE---GTLNTVKDGTQDTRTKFY 332
D PG+GR V DV+ L DV E G + D + DT K Y
Sbjct: 2122 DGPGEGRGVGEAEDVEVPKALGDVFESIAGAIFLDSDMSLDTVWKVY 2168
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 24.2 bits (50), Expect = 3.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 375 IPSKMEPKIPGPSSTDKGFPVRSTGSPTVT 286
+ +K EP+ PG +T P +T PT T
Sbjct: 84 VNAKCEPQSPGDQTTTTLRPATTTLRPTTT 113
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 24.2 bits (50), Expect = 3.6
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 375 IPSKMEPKIPGPSSTDKGFPVRSTGSPTVT 286
+ +K EP+ PG +T P +T PT T
Sbjct: 84 VNAKCEPQSPGDQTTTTLRPATTTLRPTTT 113
>AF364131-1|AAL35507.1| 378|Anopheles gambiae putative odorant
receptor Or2 protein.
Length = 378
Score = 24.2 bits (50), Expect = 3.6
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = -3
Query: 571 DQHPVLDQSVLMYNTIQISTGDVGSDLNI*WVKFPVDLPGQG 446
D PVL++ + IS +G+ ++ +V +P+ +PG+G
Sbjct: 104 DIRPVLERYTRRGRMLSISNLWLGAFISACFVTYPLFVPGRG 145
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 23.8 bits (49), Expect = 4.8
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = +1
Query: 559 QDVGPAQSQGNSYLYRTGRELQSHRRGAGD 648
+ GP + N Y+ +E+ HR+G+ +
Sbjct: 994 KSTGPHAVELNKYMKAARQEMSKHRKGSAE 1023
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 23.8 bits (49), Expect = 4.8
Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 353 LGS-IFDGIQRPLKDINELTQSIYIPKGINVPSLAREVDWE 472
LGS +DG + L+ ++E + S + G+++ V+W+
Sbjct: 170 LGSWTYDGFKVDLRHMDEKSGSNIVDVGVDLSEFYMSVEWD 210
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 23.4 bits (48), Expect = 6.3
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Frame = -3
Query: 250 VTFKTDNLTDEFIVTDTDQLVHSRSGHFFGSDDGSRYGEDISE--PLLILLIGD--RPQA 83
V +TD T TDT+ ++ S D SR GE + + L+ L GD R +
Sbjct: 672 VKLETDAETAGGGATDTESVLGRAIADLVASGDDSRQGEMLRKLLALIKLFAGDVNRSRQ 731
Query: 82 AFARHF 65
A H+
Sbjct: 732 LLASHW 737
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 23.0 bits (47), Expect = 8.3
Identities = 8/36 (22%), Positives = 20/36 (55%)
Frame = +2
Query: 365 FDGIQRPLKDINELTQSIYIPKGINVPSLAREVDWE 472
+DG + L+ ++E + S + G+++ V+W+
Sbjct: 175 YDGFKVDLRHMDEKSGSNIVDVGVDLSEFYMSVEWD 210
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,651
Number of Sequences: 2352
Number of extensions: 16079
Number of successful extensions: 67
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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