Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0723
(625 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 48 2e-07
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 47 4e-07
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 47 4e-07
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 45 2e-06
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 42 1e-05
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 41 3e-05
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 40 6e-05
M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 40 8e-05
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 37 6e-04
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 37 6e-04
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 36 0.001
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 35 0.002
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 31 0.023
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 29 0.12
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 28 0.21
Y08163-1|CAA69355.1| 192|Anopheles gambiae hypothetical protein... 25 1.5
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 24 3.4
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 24 3.4
AJ441131-6|CAD29635.1| 152|Anopheles gambiae putative protein p... 24 4.5
AJ439398-5|CAD28128.1| 152|Anopheles gambiae putative protein p... 24 4.5
AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative transcrip... 23 6.0
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 48.4 bits (110), Expect = 2e-07
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 3/157 (1%)
Frame = +1
Query: 88 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXX 267
+ADD V R A ++A A+ QW ++ +++ PAK+ +
Sbjct: 677 YADDLVVLAPGRTPEESAAVAEAAVSAVDQWMQQHHLELAPAKTEMTIISSLKHPPSHI- 735
Query: 268 XXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFI---LGRLYPM 438
I + +P++R +K+LGV + +++ PH+ +V RA I +GRL P
Sbjct: 736 --------SIDVRGTAVPYSRSIKHLGVLVHDHLSWIPHVTAVTQRAVQIAQAVGRLMPN 787
Query: 439 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAART 549
+ KMS K L VM YA+ V+ A T
Sbjct: 788 -HRGPKMS---KSRLLAAVADSVMRYAAPVWHEALNT 820
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 47.2 bits (107), Expect = 4e-07
Identities = 41/186 (22%), Positives = 83/186 (44%), Gaps = 4/186 (2%)
Frame = +1
Query: 58 PRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQ 237
P P + +ADD + + + + + A + +W ++ +++ PAK+ AVL
Sbjct: 708 PLPPDVEVIGYADDLALLVPATTTDEVRARAEEAVDQVQRWMQQHGLELAPAKTEAVLIS 767
Query: 238 XXXXXXXXXXXXXXNLTPPITLFRQ---PIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 408
TPP FR + +R ++YLGV L + +R H+ V ++A
Sbjct: 768 SKK-------------TPPQVTFRVGDVEVQSSRSIRYLGVQLQDHLKWRDHVTKVSEKA 814
Query: 409 AFILGRLYPMICKRS-KMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRF 585
+ ++ + ++ S + ++++ Y V+ YA+ V+A A T + + + R
Sbjct: 815 SRVVAAVTRLMQNHSGPRTAKSRLLAY--VAESVLRYAAPVWAEA--TQVRECRRMLQRV 870
Query: 586 CRLAAL 603
R AA+
Sbjct: 871 QRKAAI 876
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 47.2 bits (107), Expect = 4e-07
Identities = 43/179 (24%), Positives = 81/179 (45%)
Frame = +1
Query: 67 PPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXX 246
P L +ADD + + A + A A+ +W R+ +++ AK+ +
Sbjct: 665 PGAELIGYADDLVLLAPGTTPAAAAVVAEEAVSAVDRWLREHHLELAHAKTEMTVISSLQ 724
Query: 247 XXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGR 426
++T IT+ +P++R +KYLGV L ++++ PH+K+V +A I+ +
Sbjct: 725 QPPE-------DIT--ITVGGTEVPFSRTLKYLGVRLHYNLSWVPHVKAVIQKATQIV-Q 774
Query: 427 LYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAAL 603
+ + ++ L M YA+ V+ H A T+ + +SL R R AA+
Sbjct: 775 AVTQLMPNHRGPKTSRCRLLAAVADSTMRYAAPVW-HGALTNRE-CRSLLKRVQRKAAI 831
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 45.2 bits (102), Expect = 2e-06
Identities = 33/156 (21%), Positives = 68/156 (43%)
Frame = +1
Query: 67 PPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXX 246
P + +ADD + + + A +++ +W + +++ PAK+ V+
Sbjct: 651 PDAEILGYADDLVLLVPGTTPDNVKAAAEEAIISVMEWMARHHLELAPAKTEMVVISSTK 710
Query: 247 XXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGR 426
+T + + + +R ++YLGVTL +++ PH+K V +RA I
Sbjct: 711 APT--------RIT--VRVGDVDVTSSRSIRYLGVTLQDKLSWLPHVKEVTERAGKIADA 760
Query: 427 LYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFA 534
++ S+ +K L + VM YA+ V++
Sbjct: 761 TSRLLRNHSE-PRASKAKLLASVSESVMRYAAPVWS 795
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 42.3 bits (95), Expect = 1e-05
Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 3/183 (1%)
Frame = +1
Query: 67 PPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXX 246
PP ++LFADD ++ N LQ W ++ + I K V F
Sbjct: 766 PPDSISLFADDAKIFAPINNTG-DCTFLQDCIEIFCSWCKRNGLTICIEKCYCVSFSRCR 824
Query: 247 XXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGR 426
+T + + K LGV LD+S+ F+ HI V R +LG
Sbjct: 825 SP----------VTGTYFMDGTAVNRQNHAKDLGVLLDSSLNFKQHIDDVVARGNQLLG- 873
Query: 427 LYPMICKRSKMSLRNKV---TLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLA 597
+ R+ RN + +Y +R V+ Y+ VV++ + I ++++Q + R A
Sbjct: 874 ----VVIRTTNEFRNPMCIKAVYNCIVRSVLEYSCVVWSPTTASSIARIEAIQRKLTRYA 929
Query: 598 ALL 606
L
Sbjct: 930 LRL 932
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 41.1 bits (92), Expect = 3e-05
Identities = 36/171 (21%), Positives = 72/171 (42%)
Frame = +1
Query: 88 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXX 267
FADD + + A + A A+ W + ++ + P K+ ++
Sbjct: 667 FADDLAILAAGTIPEHAAAIAEEAVAAVNNWMVQHKLSLAPEKTELLMISSKRSGYR--- 723
Query: 268 XXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICK 447
N+ P+ + + R ++YLGV L +++RPH++ V D+A ++ L ++
Sbjct: 724 ----NI--PVNICGVEVRSKRSIRYLGVMLHDHLSWRPHVEMVADKALRVVRALRGIMRN 777
Query: 448 RSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLAA 600
S + +K L ++ Y + V+ A T + + + R RL A
Sbjct: 778 HSGPQV-SKRKLLAAVAASIIRYGAPVWTEA--TDLQWCRRILDRVQRLLA 825
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 39.9 bits (89), Expect = 6e-05
Identities = 25/111 (22%), Positives = 49/111 (44%)
Frame = +1
Query: 88 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXX 267
+ADD + + A + A A+ QW + R+++ +K+ +
Sbjct: 733 YADDLVLLVPGTTPTTAAAAAEEAVAAVKQWLLEHRLELAHSKTEMTVISSLKQPPEEVF 792
Query: 268 XXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFIL 420
IT +P++R +KYLGV + A +++ PH+K + +A I+
Sbjct: 793 ---------ITFGGVNVPFSRSIKYLGVRVHAHLSWVPHVKEITLKATRIV 834
>M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles
gambiae T1 retroposon. ).
Length = 975
Score = 39.5 bits (88), Expect = 8e-05
Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 1/178 (0%)
Frame = +1
Query: 67 PPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXX 246
PP L+ADD ++ + S LQ A W + + P K + + F
Sbjct: 695 PPDGHLLYADDIKIFLPVSSSS-DCMSLQHYLNAFVHWCSSNLLRLCPDKCSVISFSHSL 753
Query: 247 XXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGR 426
++ TL + ++ LG+ LD+ + F+ + V +A LG
Sbjct: 754 SP----------ISFNYTLSNSSLSRVLSIRDLGIILDSRLNFKLQLDEVLLKANRTLGF 803
Query: 427 LYPMICK-RSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRLA 597
+ R + LRN LY +RP++ YAS+++ ++S+Q F R+A
Sbjct: 804 ILRFTSIFRDQSFLRN---LYYALVRPLLEYASIIWNPPTIDGCSRIESIQRLFTRVA 858
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 36.7 bits (81), Expect = 6e-04
Identities = 30/151 (19%), Positives = 61/151 (40%)
Frame = +1
Query: 79 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 258
+ +ADD + + + + + A ++ W + + I P K+ VL
Sbjct: 722 MVAYADDLVLLIPGIDVNAVKAAAEEAVASVSHWMAQHHLQIAPEKTECVLISSTKNPTQ 781
Query: 259 XXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 438
I + + +R ++YLGVTL +++ PH++ V RA I + +
Sbjct: 782 VT----------IRVGDVEVTSSRTMRYLGVTLHDHLSWLPHVREVTTRARKIADAVTRL 831
Query: 439 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVF 531
+ S +K L + V+ YA+ ++
Sbjct: 832 LRNHSGPK-TSKARLLASVAESVIRYAAPIW 861
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 36.7 bits (81), Expect = 6e-04
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = +1
Query: 325 ARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRP 504
+R +KYLG+ +D + + HIK V +RA L M+ RS + + T I
Sbjct: 711 SRHLKYLGIMIDDRLEYTQHIKYVAERAVTNTNALVRMMPNRSGPRSSRRRIIANTIIAG 770
Query: 505 VMTYASVVFAHAAR 546
+ YAS ++A + +
Sbjct: 771 I-RYASSIWAESLK 783
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 35.5 bits (78), Expect = 0.001
Identities = 32/170 (18%), Positives = 67/170 (39%), Gaps = 1/170 (0%)
Frame = +1
Query: 40 YSSTIFPRSPP-THLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAK 216
Y S + + P + FADD + +++ + A A+ W +++ PAK
Sbjct: 661 YDSVLDVQLPEGAEIIAFADDLLLLDPGITPEAASQRAEEAVSAVNLWMENHCLELAPAK 720
Query: 217 STAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSV 396
+ V N+ P+ + R ++YLGV +D ++++ H++
Sbjct: 721 TELVTISSKRQG---------NINVPVVINGVERRTTRSIRYLGVVIDNQLSWKSHVEYC 771
Query: 397 RDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAAR 546
+A L ++ S K L + + ++ YA+ V+ A +
Sbjct: 772 TTKALRTAKALGCLMRNHSGPKCA-KRRLLASVVDSILRYAAPVWHEATK 820
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 35.1 bits (77), Expect = 0.002
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +1
Query: 325 ARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRP 504
+R +KYLG+ LD + + HI+ +RA + L M+ ++ S + + T +
Sbjct: 706 SRTLKYLGMVLDDRLEYTSHIRYAVERATKLWTTLVRMMPNKAGPSSNVRRVIALTVVAK 765
Query: 505 VMTYASVVFAHAAR 546
V YAS ++ H R
Sbjct: 766 V-RYASPIWCHTLR 778
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 31.5 bits (68), Expect = 0.023
Identities = 29/151 (19%), Positives = 59/151 (39%)
Frame = +1
Query: 88 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXX 267
+ADD V A + A A+ W + + P K+ V+
Sbjct: 664 YADDIVVMARGCTPQEAALVAEQAVDAIAAWMEDHHLQLAPEKTEGVMISSLRRG----- 718
Query: 268 XXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICK 447
L P + I + ++YLGV + ++++PH++ +A ++G + ++
Sbjct: 719 ----QLKVPFRVGDTIIHSKQSIRYLGVQIHDHLSWKPHVELSTAKALRVVGVVTAVMRN 774
Query: 448 RSKMSLRNKVTLYKTCIRPVMTYASVVFAHA 540
S + K L ++ YA+ V++ A
Sbjct: 775 HSGPQVA-KRRLLAAVAESIIRYAAPVWSEA 804
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 29.1 bits (62), Expect = 0.12
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +1
Query: 328 RKVKYLGVTLDASMTFRPHIKSVRD---RAAFILGRLYPMICKRSKMSLRNKVTLYKTCI 498
R +KYLGV +D + F+ H++ +A L P I S+R L+ C
Sbjct: 764 RSLKYLGVVIDDRLKFKSHLEEACKKVMKAINALAAFTPNIGGPCS-SIRR---LHANCA 819
Query: 499 RPVMTYASVVFAH 537
V+ Y + V+AH
Sbjct: 820 ISVLRYGAPVWAH 832
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 28.3 bits (60), Expect = 0.21
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 328 RKVKYLGVTLDASMTFRPHIK 390
R +KYLGV +D ++FR H++
Sbjct: 703 RHLKYLGVIIDDRLSFRKHVE 723
>Y08163-1|CAA69355.1| 192|Anopheles gambiae hypothetical protein
protein.
Length = 192
Score = 25.4 bits (53), Expect = 1.5
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1
Query: 142 KKLQSAALALGQWFRKWRIDINPAKSTAVL 231
KK L +G +FR WR I+ K A +
Sbjct: 73 KKFTIGTLGVGSFFRAWRNCIDEGKGLATI 102
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 24.2 bits (50), Expect = 3.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 386 ICGRNVIDASRVTPRYLTFLAQGMG 312
+CG +D ++VT TFL G G
Sbjct: 805 VCGARAMDIAKVTCTVNTFLWDGSG 829
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 24.2 bits (50), Expect = 3.4
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 292 PITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 408
PI + I + ++YLGV + +RPH+ ++A
Sbjct: 720 PIRVGGLEIRSKQAIRYLGVMIHDHFLWRPHVTMAVEKA 758
>AJ441131-6|CAD29635.1| 152|Anopheles gambiae putative protein
protein.
Length = 152
Score = 23.8 bits (49), Expect = 4.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 334 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLY 432
V+YLG + FRP IK + A++ + Y
Sbjct: 14 VRYLGYANEIGEAFRPVIKKIFVHASYAVAISY 46
>AJ439398-5|CAD28128.1| 152|Anopheles gambiae putative protein
protein.
Length = 152
Score = 23.8 bits (49), Expect = 4.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 334 VKYLGVTLDASMTFRPHIKSVRDRAAFILGRLY 432
V+YLG + FRP IK + A++ + Y
Sbjct: 14 VRYLGYANEIGEAFRPVIKKIFVHASYAVAISY 46
>AJ438610-4|CAD27476.1| 593|Anopheles gambiae putative
transcription factor protein.
Length = 593
Score = 23.4 bits (48), Expect = 6.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 360 IQGNAQVLDLPGPG 319
+ GN QV + PGPG
Sbjct: 220 LDGNVQVREAPGPG 233
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,375
Number of Sequences: 2352
Number of extensions: 13991
Number of successful extensions: 42
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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