Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0723
(625 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 113 2e-25
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 113 2e-25
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 106 2e-23
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 95 7e-20
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 89 6e-18
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 89 6e-18
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 87 1e-17
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 82 5e-16
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 82 5e-16
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 66 3e-11
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 66 3e-11
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 66 3e-11
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 66 3e-11
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 58 1e-08
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 56 5e-08
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 56 5e-08
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 56 5e-08
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 56 5e-08
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 56 5e-08
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 54 1e-07
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 45 7e-05
U14102-1|AAC46495.1| 299|Drosophila melanogaster putative rever... 40 0.002
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 29 5.1
BT023790-1|AAZ41799.1| 828|Drosophila melanogaster GH11852p pro... 28 8.9
AE014298-1596|AAF48032.1| 943|Drosophila melanogaster CG1737-PA... 28 8.9
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 113 bits (272), Expect = 2e-25
Identities = 58/179 (32%), Positives = 96/179 (53%)
Frame = +1
Query: 58 PRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQ 237
P++ L+LFADD VY + + S I + +QS L +++KW+I INP K+ A+ F
Sbjct: 685 PQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFT 744
Query: 238 XXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFI 417
+ + PI W ++YLG+ D +TF+ HI + + I
Sbjct: 745 KRRKPRYLPDRQ-------LRILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKI 797
Query: 418 LGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRL 594
+ LYP+I ++SK+S+ NK+ ++KT P++ Y S V+ A+THI LQ Q++ +L
Sbjct: 798 ICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKL 856
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 113 bits (272), Expect = 2e-25
Identities = 58/179 (32%), Positives = 96/179 (53%)
Frame = +1
Query: 58 PRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQ 237
P++ L+LFADD VY + + S I + +QS L +++KW+I INP K+ A+ F
Sbjct: 633 PQATNCVLSLFADDAAVYSAGFSYSEINQSMQSYLNELDIYYKKWKIKINPNKTNAIFFT 692
Query: 238 XXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFI 417
+ + PI W ++YLG+ D +TF+ HI + + I
Sbjct: 693 KRRKPRYLPDRQ-------LRILDSPIQWVDNIRYLGIIFDKKLTFKYHINNTIMKVNKI 745
Query: 418 LGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRL 594
+ LYP+I ++SK+S+ NK+ ++KT P++ Y S V+ A+THI LQ Q++ +L
Sbjct: 746 ICTLYPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQNKLLKL 804
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown protein.
Length = 908
Score = 106 bits (255), Expect = 2e-23
Identities = 59/172 (34%), Positives = 86/172 (50%)
Frame = +1
Query: 79 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 258
LA FADD V Y SR + A +Q A +W R+W I IN +KS V F
Sbjct: 671 LATFADDVCVTYRSRCEHDAADGIQDFAYRFSEWARRWNIGINSSKSNNVCFTLKR---- 726
Query: 259 XXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 438
PP+ + P+P KYLGV LD +TF H+ +R R + + Y +
Sbjct: 727 -------RTPPPVYIEEVPVPQPNAAKYLGVLLDRRLTFSKHVTDIRTRLRAKVAKHYWL 779
Query: 439 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCRL 594
+ RSK+SL NK+T+YK + P Y ++ A +HI +Q++Q++ RL
Sbjct: 780 LSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARL 831
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 95.1 bits (226), Expect = 7e-20
Identities = 58/187 (31%), Positives = 95/187 (50%)
Frame = +1
Query: 31 YLAYSSTIFPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINP 210
YL Y++ I P + ++ FADDT + SR+ +L + + +W WRI +N
Sbjct: 649 YLIYTADI-PTNSRLTVSTFADDTAILSRSRSPIQATAQLALYLIDIKKWLSDWRIKVNE 707
Query: 211 AKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIK 390
K V F PP+ L P+P A +V YLGV LD +T+R HI+
Sbjct: 708 QKCKHVTFTLNRQDC-----------PPLLLNSIPLPKADEVTYLGVHLDRRLTWRRHIE 756
Query: 391 SVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQS 570
+ + + L+ +I S +SL +KV LY + ++P+ TY S ++ +A+ ++ID +Q
Sbjct: 757 AKKTQLKLKANNLHWLINSGSPLSLDHKVLLYNSILKPIWTYGSQLWGNASNSNIDIIQR 816
Query: 571 LQSRFCR 591
QS+ R
Sbjct: 817 AQSKILR 823
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 88.6 bits (210), Expect = 6e-18
Identities = 59/188 (31%), Positives = 88/188 (46%)
Frame = +1
Query: 31 YLAYSSTIFPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINP 210
Y Y++ FP + FADDT + S+ L ++ +W WRI IN
Sbjct: 647 YTLYTAD-FPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINV 705
Query: 211 AKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIK 390
K V F PP+ L IP A +V YLGV LD +T+R HI+
Sbjct: 706 QKCKQVTFTLNK-----------QTCPPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIE 754
Query: 391 SVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQS 570
+ L+ +I RS +SL K LY + ++P+ TY S ++ +A+R++ID +Q
Sbjct: 755 AKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQR 814
Query: 571 LQSRFCRL 594
QSR R+
Sbjct: 815 AQSRILRI 822
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 88.6 bits (210), Expect = 6e-18
Identities = 59/188 (31%), Positives = 88/188 (46%)
Frame = +1
Query: 31 YLAYSSTIFPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINP 210
Y Y++ FP + FADDT + S+ L ++ +W WRI IN
Sbjct: 647 YTLYTAD-FPIDYNLTTSTFADDTAILSRSKCPIKATALLSRHLTSVERWLADWRISINV 705
Query: 211 AKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIK 390
K V F PP+ L IP A +V YLGV LD +T+R HI+
Sbjct: 706 QKCKQVTFTLNK-----------QTCPPLVLNNICIPQADEVTYLGVHLDRRLTWRKHIE 754
Query: 391 SVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQS 570
+ L+ +I RS +SL K LY + ++P+ TY S ++ +A+R++ID +Q
Sbjct: 755 AKSKHLKLKARNLHWLINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQR 814
Query: 571 LQSRFCRL 594
QSR R+
Sbjct: 815 AQSRILRI 822
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 87.4 bits (207), Expect = 1e-17
Identities = 52/171 (30%), Positives = 86/171 (50%)
Frame = +1
Query: 79 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 258
LA +ADD + YSS + A+ LQ L W ++W + +NP K+ F
Sbjct: 675 LATYADDIALLYSSNCCNEAARGLQEYLTTLAAWCKRWILKVNPQKTINPCFTLKTLSP- 733
Query: 259 XXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 438
+T PI L + + KYLG+TLD +TF PH+K+ R + +L +
Sbjct: 734 --------VTAPIELEGVILDQPSQAKYLGITLDKRLTFGPHLKATTRRCYQRMQQLRWL 785
Query: 439 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 591
+ ++S M+LR K +Y C+ P+ Y ++ AA+++ + +Q LQ+R R
Sbjct: 786 LNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMR 836
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 82.2 bits (194), Expect = 5e-16
Identities = 51/171 (29%), Positives = 83/171 (48%)
Frame = +1
Query: 79 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 258
+A +ADDT V S++ LQ A QW W + IN K V F
Sbjct: 676 IATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANRTGSC- 734
Query: 259 XXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 438
P ++L + I + KYLG+TLD +TF HI +++ + R+ +
Sbjct: 735 ----------PGVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWL 784
Query: 439 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 591
I R+K+SL KV +YK+ + P + Y V+ AA++H++ ++ LQ++ R
Sbjct: 785 IAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLR 835
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 82.2 bits (194), Expect = 5e-16
Identities = 51/171 (29%), Positives = 83/171 (48%)
Frame = +1
Query: 79 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 258
+A +ADDT V S++ LQ A QW W + IN K V F
Sbjct: 478 IATYADDTAVLTKSKSILAATSGLQEYLDAFQQWAENWNVRINAEKCANVTFANRTGSC- 536
Query: 259 XXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 438
P ++L + I + KYLG+TLD +TF HI +++ + R+ +
Sbjct: 537 ----------PGVSLNGRLIRHHQAYKYLGITLDRKLTFSRHITNIQQAFRTKVARMSWL 586
Query: 439 ICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 591
I R+K+SL KV +YK+ + P + Y V+ AA++H++ ++ LQ++ R
Sbjct: 587 IAPRNKLSLGCKVNIYKSILAPCLFYGLQVYGIAAKSHLNKIRILQAKTLR 637
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 66.5 bits (155), Expect = 3e-11
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
Frame = +1
Query: 55 FPRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 228
FP PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +
Sbjct: 274 FPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHI 333
Query: 229 LFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 408
LF TPP+ + Q K +YLG+ LD +TF H+ ++ +
Sbjct: 334 LFSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKT 385
Query: 409 AFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRF 585
+L +I K S + K+ L+K + P+ YA ++ + T +Q++++++
Sbjct: 386 IAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKY 445
Query: 586 CR 591
R
Sbjct: 446 IR 447
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 66.5 bits (155), Expect = 3e-11
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
Frame = +1
Query: 55 FPRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 228
FP PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +
Sbjct: 721 FPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHI 780
Query: 229 LFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 408
LF TPP+ + Q K +YLG+ LD +TF H+ ++ +
Sbjct: 781 LFSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKT 832
Query: 409 AFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRF 585
+L +I K S + K+ L+K + P+ YA ++ + T +Q++++++
Sbjct: 833 IAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKY 892
Query: 586 CR 591
R
Sbjct: 893 IR 894
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 66.5 bits (155), Expect = 3e-11
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
Frame = +1
Query: 55 FPRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 228
FP PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +
Sbjct: 721 FPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHI 780
Query: 229 LFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 408
LF TPP+ + Q K +YLG+ LD +TF H+ ++ +
Sbjct: 781 LFSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKT 832
Query: 409 AFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRF 585
+L +I K S + K+ L+K + P+ YA ++ + T +Q++++++
Sbjct: 833 IAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKY 892
Query: 586 CR 591
R
Sbjct: 893 IR 894
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 66.5 bits (155), Expect = 3e-11
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 3/182 (1%)
Frame = +1
Query: 55 FPRSPPTH--LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAV 228
FP PT+ LA +ADDT + S+ L Q+ +W +KW I IN K+ +
Sbjct: 721 FPDYHPTNIILATYADDTIILSRSKYTKLAINLNQNYLNVFCRWSKKWDIAINAKKTGHI 780
Query: 229 LFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRA 408
LF TPP+ + Q K +YLG+ LD +TF H+ ++ +
Sbjct: 781 LFSLKKEQTNIY-------TPPL-INGQRAAKLNKQRYLGLMLDRRLTFCAHMTLLKGKT 832
Query: 409 AFILGRLYPMICKRSKMSLRNKVTLYKTCIRPVMTYASVVFAH-AARTHIDTLQSLQSRF 585
+L +I K S + K+ L+K + P+ YA ++ + T +Q++++++
Sbjct: 833 IAAYKKLEWLIGKNSHLPKNAKILLWKQIVSPIWHYAIAIWGSLVSDTQAKKIQTMENKY 892
Query: 586 CR 591
R
Sbjct: 893 IR 894
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 57.6 bits (133), Expect = 1e-08
Identities = 37/147 (25%), Positives = 64/147 (43%)
Frame = +1
Query: 79 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 258
L+ +ADDT V S + + ++ W KW I +N AK+ V+F
Sbjct: 732 LSTYADDTIVLSSDTLATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIFTLKNDLPT 791
Query: 259 XXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 438
+ + Q I K YLGVTLD+ +T H+ + + + +L +
Sbjct: 792 NSMN--------VKIKGQTIKKESKQSYLGVTLDSKLTLSSHVTKLLGKYSTAYRKLTWI 843
Query: 439 ICKRSKMSLRNKVTLYKTCIRPVMTYA 519
+ RSK+ + K+ + K+ + P+ YA
Sbjct: 844 LNGRSKLPTKTKILILKSVLSPIWQYA 870
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial cds.
).
Length = 964
Score = 55.6 bits (128), Expect = 5e-08
Identities = 38/147 (25%), Positives = 65/147 (44%)
Frame = +1
Query: 79 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 258
L+ +ADDT V S + + ++ W KW I +N AK+ V++
Sbjct: 604 LSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT 663
Query: 259 XXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 438
NL + + Q I K YLGV LD+ +T PH+ V + ++ +
Sbjct: 664 -------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWI 715
Query: 439 ICKRSKMSLRNKVTLYKTCIRPVMTYA 519
+ +RSK+ K+ + K+ + P+ YA
Sbjct: 716 LNERSKLPTNTKMLILKSVLSPIWQYA 742
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 55.6 bits (128), Expect = 5e-08
Identities = 38/147 (25%), Positives = 65/147 (44%)
Frame = +1
Query: 79 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 258
L+ +ADDT V S + + ++ W KW I +N AK+ V++
Sbjct: 720 LSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT 779
Query: 259 XXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 438
NL + + Q I K YLGV LD+ +T PH+ V + ++ +
Sbjct: 780 -------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWI 831
Query: 439 ICKRSKMSLRNKVTLYKTCIRPVMTYA 519
+ +RSK+ K+ + K+ + P+ YA
Sbjct: 832 LNERSKLPTNTKMLILKSVLSPIWQYA 858
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 55.6 bits (128), Expect = 5e-08
Identities = 38/147 (25%), Positives = 65/147 (44%)
Frame = +1
Query: 79 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 258
L+ +ADDT V S + + ++ W KW I +N AK+ V++
Sbjct: 720 LSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT 779
Query: 259 XXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 438
NL + + Q I K YLGV LD+ +T PH+ V + ++ +
Sbjct: 780 -------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWI 831
Query: 439 ICKRSKMSLRNKVTLYKTCIRPVMTYA 519
+ +RSK+ K+ + K+ + P+ YA
Sbjct: 832 LNERSKLPTNTKMLILKSVLSPIWQYA 858
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 55.6 bits (128), Expect = 5e-08
Identities = 38/147 (25%), Positives = 65/147 (44%)
Frame = +1
Query: 79 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 258
L+ +ADDT V S + + ++ W KW I +N AK+ V++
Sbjct: 682 LSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT 741
Query: 259 XXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 438
NL + + Q I K YLGV LD+ +T PH+ V + ++ +
Sbjct: 742 -------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWI 793
Query: 439 ICKRSKMSLRNKVTLYKTCIRPVMTYA 519
+ +RSK+ K+ + K+ + P+ YA
Sbjct: 794 LNERSKLPTNTKMLILKSVLSPIWQYA 820
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 55.6 bits (128), Expect = 5e-08
Identities = 38/147 (25%), Positives = 65/147 (44%)
Frame = +1
Query: 79 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 258
L+ +ADDT V S + + ++ W KW I +N AK+ V++
Sbjct: 720 LSTYADDTIVLSSDILATAATRNNENYLKTFSDWADKWGISVNAAKTGHVIYTLKNDIPT 779
Query: 259 XXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 438
NL + + Q I K YLGV LD+ +T PH+ V + ++ +
Sbjct: 780 -------NLKT-MKIKGQAIKKESKQSYLGVILDSKLTLSPHVTKVVGKYLTAYRKMSWI 831
Query: 439 ICKRSKMSLRNKVTLYKTCIRPVMTYA 519
+ +RSK+ K+ + K+ + P+ YA
Sbjct: 832 LNERSKLPTNTKMLILKSVLSPIWQYA 858
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 54.4 bits (125), Expect = 1e-07
Identities = 35/147 (23%), Positives = 64/147 (43%)
Frame = +1
Query: 79 LALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXX 258
L+ +ADDT V S + + ++ + W KW I +N AK+ V+F
Sbjct: 720 LSTYADDTIVLSSDTLATAATRNNENYLKSFSDWADKWGISVNAAKTGHVIFTLKNDLPT 779
Query: 259 XXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPM 438
+ + Q I K YLGV LD+ +T H+ + + ++ +
Sbjct: 780 SLRT--------MKIKGQVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWI 831
Query: 439 ICKRSKMSLRNKVTLYKTCIRPVMTYA 519
+ +RSK+ + K+ + K+ + P+ YA
Sbjct: 832 LNRRSKLPTKTKMLILKSVLSPIWQYA 858
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 45.2 bits (102), Expect = 7e-05
Identities = 23/85 (27%), Positives = 42/85 (49%)
Frame = +1
Query: 289 PPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLR 468
P + + +P+ R +YLG+T+ M F HI S+R R ++G L ++ S R
Sbjct: 719 PTVRFAGRNLPYVRSCRYLGITVSEGMKFLTHIASLRQRMTGVVGALARVLRADWGFSPR 778
Query: 469 NKVTLYKTCIRPVMTYASVVFAHAA 543
+ T+Y + P + + + V+ A
Sbjct: 779 ARRTIYDGLMAPCVLFGAPVWYDTA 803
>U14102-1|AAC46495.1| 299|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 299
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +1
Query: 310 QPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYK 489
Q I K YLGV LD+ +T H+ + + ++ ++ +RSK+ + K+ + K
Sbjct: 4 QVIKIESKQSYLGVILDSKLTLSSHVTKLMGKYTTAYRKMTWILNRRSKLPTKTKMLILK 63
Query: 490 TCIRPVMTYA 519
+ + P+ YA
Sbjct: 64 SVLSPIWQYA 73
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 325 ARKVKYLGVTLDASMTFRPHIKSVRDRAAF---ILGRLYPMI 441
A +KYLGV +D ++F+ H + +AA L R+ P +
Sbjct: 714 AETLKYLGVLIDRRLSFKAHARYASKKAAMTAAALARIMPNV 755
>BT023790-1|AAZ41799.1| 828|Drosophila melanogaster GH11852p
protein.
Length = 828
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -3
Query: 422 PRINAARSRTDFICGRNVIDASRVTPRYLTFLAQGMG 312
P I A+RSR + VTP+YL LA G G
Sbjct: 165 PTIAASRSRRSIKPNPKYVSEDIVTPKYLAALADGGG 201
>AE014298-1596|AAF48032.1| 943|Drosophila melanogaster CG1737-PA
protein.
Length = 943
Score = 28.3 bits (60), Expect = 8.9
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -3
Query: 422 PRINAARSRTDFICGRNVIDASRVTPRYLTFLAQGMG 312
P I A+RSR + VTP+YL LA G G
Sbjct: 165 PTIAASRSRRSIKPNPKYVSEDIVTPKYLAALADGGG 201
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,620,108
Number of Sequences: 53049
Number of extensions: 633807
Number of successful extensions: 1496
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1481
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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