Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0723
(625 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 48 7e-06
AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical ... 40 0.001
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 40 0.001
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 34 0.072
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 33 0.13
AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical ... 29 2.7
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 28 6.2
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 28 6.2
AC024791-24|AAF60656.1| 627|Caenorhabditis elegans Hypothetical... 28 6.2
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 47.6 bits (108), Expect = 7e-06
Identities = 44/168 (26%), Positives = 74/168 (44%)
Frame = +1
Query: 88 FADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXX 267
FADDT +Y +S K+ LQSA A+ W + ++ +N +K+ V
Sbjct: 108 FADDTKLY-ASTPKTESENNLQSALDAVVDWTKGSKLTLNQSKTVHVTV----------- 155
Query: 268 XXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICK 447
+ L PI + LG + + F H + + A F L ++ K
Sbjct: 156 -GKRRIDFKYHLDGYPIERKAITRDLGFLISEKLDFSDHWRKCINLAKFQLANMFN---K 211
Query: 448 RSKMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 591
S + + + LYKT IRP + Y +VV + ++ T++S+Q+ F R
Sbjct: 212 YSTSNKKLMILLYKTFIRPRLEYGTVVSSPTKKSDEKTIESVQNAFTR 259
>AF043700-1|AAB97571.2| 328|Caenorhabditis elegans Hypothetical
protein K09H9.4 protein.
Length = 328
Score = 39.9 bits (89), Expect = 0.001
Identities = 40/166 (24%), Positives = 69/166 (41%)
Frame = +1
Query: 94 DDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDINPAKSTAVLFQXXXXXXXXXXXX 273
DDT +Y S+ K+ LQ+A A+ W R ++ ++ +K+ V
Sbjct: 80 DDTKLYVSTP-KAETENNLQAALDAVVDWTRGAKLTLSQSKTVHVTVGRCRKDFKYH--- 135
Query: 274 XXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRS 453
L PI + LG + + F H K + A F L ++ +
Sbjct: 136 ---------LDGYPIERKTITRDLGFLISEKLDFSEHWKKSINLAKFQLANIFNQYSTSN 186
Query: 454 KMSLRNKVTLYKTCIRPVMTYASVVFAHAARTHIDTLQSLQSRFCR 591
K + + LYKT IRP + Y +VV + ++ ++S+Q+ F R
Sbjct: 187 KKLM---ILLYKTFIRPRLEYGTVVSSPTKKSDEKAIESVQNAFTR 229
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/84 (27%), Positives = 41/84 (48%)
Frame = +1
Query: 313 PIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKT 492
PI + + LG+ D+ +TF+PHIK + + L R ++ + L+KT
Sbjct: 188 PISPSNIARDLGILTDSKLTFKPHIKKI---VSLALLRCKQLLKSFKSLCPEFYCNLFKT 244
Query: 493 CIRPVMTYASVVFAHAARTHIDTL 564
I P++ Y S V++ + + TL
Sbjct: 245 YILPLIEYGSAVYSPKPSSSLSTL 268
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 34.3 bits (75), Expect = 0.072
Identities = 23/74 (31%), Positives = 35/74 (47%)
Frame = +1
Query: 313 PIPWARKVKYLGVTLDASMTFRPHIKSVRDRAAFILGRLYPMICKRSKMSLRNKVTLYKT 492
PI + V+ LG+ D + F HI V + + R ++ S S + LYKT
Sbjct: 969 PITPSSTVRDLGLITDCKLKFEHHIVKV---SCLAMLRSKQILKAFSSNSPKFYAHLYKT 1025
Query: 493 CIRPVMTYASVVFA 534
+ P+M Y S V+A
Sbjct: 1026 YVAPIMNYCSEVYA 1039
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 33.5 bits (73), Expect = 0.13
Identities = 26/121 (21%), Positives = 46/121 (38%)
Frame = +1
Query: 25 PSYLAYSSTIFPRSPPTHLALFADDTTVYYSSRNKSLIAKKLQSAALALGQWFRKWRIDI 204
P+ + P T L +ADD ++ + A+K+Q + ++ ++ + I
Sbjct: 541 PNLFTFYLKDMPTQQDTMLISYADDMSIIARDKKIEKAAEKVQLHIDEIAKYLKERGMSI 600
Query: 205 NPAKSTAVLFQXXXXXXXXXXXXXXNLTPPITLFRQPIPWARKVKYLGVTLDASMTFRPH 384
+ KST +F P I PIP K LG+TL+ + H
Sbjct: 601 SAEKSTVTVFSCDPKEH--------KTKPDIYWMDDPIPVINAPKLLGITLNTMTGTKDH 652
Query: 385 I 387
+
Sbjct: 653 V 653
>AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical
protein Y82E9BR.8 protein.
Length = 390
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1
Query: 55 ISLTNKLNRRGERTEPCG 2
ISLTN GERT+PCG
Sbjct: 50 ISLTNMPKSTGERTDPCG 67
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical
protein F15D3.1a protein.
Length = 3674
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 1 SHKALSSHPSYLAYSS-TIFPRSPPT-HLALFADDTTVYYSSRNKSLIAKKLQSAALALG 174
SHK LSS PS + S+ I P++PPT H D + S + ++K S++ G
Sbjct: 259 SHKMLSSQPSTSSSSALQIPPQTPPTAHHQAMLDRGKSFEQSAEGEVRSRKSSSSSQKSG 318
Query: 175 Q 177
+
Sbjct: 319 K 319
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical
protein F15D3.1a protein.
Length = 3674
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 1 SHKALSSHPSYLAYSS-TIFPRSPPT-HLALFADDTTVYYSSRNKSLIAKKLQSAALALG 174
SHK LSS PS + S+ I P++PPT H D + S + ++K S++ G
Sbjct: 259 SHKMLSSQPSTSSSSALQIPPQTPPTAHHQAMLDRGKSFEQSAEGEVRSRKSSSSSQKSG 318
Query: 175 Q 177
+
Sbjct: 319 K 319
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 1 SHKALSSHPSYLAYSS-TIFPRSPPT-HLALFADDTTVYYSSRNKSLIAKKLQSAALALG 174
SHK LSS PS + S+ I P++PPT H D + S + ++K S++ G
Sbjct: 259 SHKMLSSQPSTSSSSALQIPPQTPPTAHHQAMLDRGKSFEQSAEGEVRSRKSSSSSQKSG 318
Query: 175 Q 177
+
Sbjct: 319 K 319
>AC024791-24|AAF60656.1| 627|Caenorhabditis elegans Hypothetical
protein Y47G6A.4 protein.
Length = 627
Score = 27.9 bits (59), Expect = 6.2
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 132 PNREEASERSPSPRTVVPKMAHRHQPSEKYCGAISEGKLHTDF-LPD*EEESHTP 293
PN ++ S P+PR + P+ A R PS+ A SE K + F D E+ TP
Sbjct: 540 PNVQQESVVVPAPRRLSPQRAPR--PSQNSPNAYSERKSFSAFPSEDPSEDYETP 592
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,121,593
Number of Sequences: 27780
Number of extensions: 297768
Number of successful extensions: 751
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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