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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0723
         (625 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g32170.1 68415.m03932 expressed protein ;supported by cDNA GI...    30   1.4  
At3g06070.1 68416.m00694 expressed protein                             28   5.8  
At1g15770.1 68414.m01892 expressed protein                             27   7.7  

>At2g32170.1 68415.m03932 expressed protein ;supported by cDNA
           GI:20259498
          Length = 504

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = -2

Query: 591 PAKAGL*GLEGVYVCAGRVSEHHTRVSHDGPYASFVKCHLVPKGH 457
           PA AG+   EG  +C G   E +   SH G + + V C  +   H
Sbjct: 365 PASAGI--TEGFSMCGGDFVEVYNESSHAGMWDAVVTCFFIDTAH 407


>At3g06070.1 68416.m00694 expressed protein
          Length = 151

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = +3

Query: 168 PRTVVPKMAHRHQPSEKYCGAISEGKLHTDFLPD*EEESHTPDYSL*TTHTLGQE 332
           PR+  P+  H H P +K      +G+    F+P  +   H  D +L T +   QE
Sbjct: 79  PRSSQPRRKHNHHPHQK-----KQGRFIGSFIPKQQFPHHGHDNNLTTLNNNNQE 128


>At1g15770.1 68414.m01892 expressed protein
          Length = 332

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = -2

Query: 546 AGRVSEHHTRVSHDGPYASFVKCHLVPKGHFTPLTDHGVESTEN 415
           AG V    +R S      +  KCHL  +   T   DH  E+++N
Sbjct: 265 AGSVPGKGSRASFGVDLVAMTKCHLQERNFMTQDGDHEKEASDN 308


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,484,170
Number of Sequences: 28952
Number of extensions: 285159
Number of successful extensions: 614
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1265787216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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