BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ceN-0721 (542 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF022981-6|AAY86319.1| 202|Caenorhabditis elegans Hypothetical ... 30 1.2 Z74042-17|CAA98537.1| 688|Caenorhabditis elegans Hypothetical p... 29 1.6 AL031623-1|CAA20938.1| 688|Caenorhabditis elegans Hypothetical ... 29 1.6 U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 2.2 AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 29 2.9 AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ... 28 3.8 AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ... 28 3.8 >AF022981-6|AAY86319.1| 202|Caenorhabditis elegans Hypothetical protein W03F9.11 protein. Length = 202 Score = 29.9 bits (64), Expect = 1.2 Identities = 14/40 (35%), Positives = 17/40 (42%) Frame = +1 Query: 247 LIQPTLRLPSTRATPRLPSPSQHPSLRPLRPQYLPFHPTL 366 +I+PT +T P P P P P RP PF L Sbjct: 111 VIKPTTTTTTTTTPPPPPPPKPSPEFLPFRPTNQPFFDDL 150 >Z74042-17|CAA98537.1| 688|Caenorhabditis elegans Hypothetical protein T11F9.12 protein. Length = 688 Score = 29.5 bits (63), Expect = 1.6 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = +1 Query: 268 LPSTRATPRLPSPSQHP-SLRPLRPQYLPFHPTLPRHR 378 LPST TPR + ++ P + P+ +P P +PRHR Sbjct: 365 LPST-TTPRSTTTTEEPMKFEEVVPEVVPEKPEVPRHR 401 >AL031623-1|CAA20938.1| 688|Caenorhabditis elegans Hypothetical protein T11F9.12 protein. Length = 688 Score = 29.5 bits (63), Expect = 1.6 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = +1 Query: 268 LPSTRATPRLPSPSQHP-SLRPLRPQYLPFHPTLPRHR 378 LPST TPR + ++ P + P+ +P P +PRHR Sbjct: 365 LPST-TTPRSTTTTEEPMKFEEVVPEVVPEKPEVPRHR 401 >U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical protein R144.4b protein. Length = 362 Score = 29.1 bits (62), Expect = 2.2 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +1 Query: 256 PTLRLPSTRATPRLPSPSQH-PSLRPLRPQYLPFHPTLP 369 P + +PS++ TP P P+Q PS + R Q+ P P Sbjct: 162 PPVSVPSSKPTPPPPPPAQQKPSFQSDREQFRTMRPLRP 200 >AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical protein Y8A9A.2 protein. Length = 1360 Score = 28.7 bits (61), Expect = 2.9 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = +1 Query: 244 LLIQPTLRLPSTRATPRLPSPSQHPSLRPLRPQYLPFHP-TLPR 372 +L+QP+L L R+ P P PS + + + LP HP LPR Sbjct: 435 ILLQPSLPLNQLRSLPAHPLILLQPSQQQNQLRSLPAHPLILPR 478 Score = 28.3 bits (60), Expect = 3.8 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +1 Query: 244 LLIQPTLRLPSTRATPRLPSPSQHPSLRPLRPQYLPFHPTL 366 +L+QP+L R+ P LP PSL + + LP HP + Sbjct: 415 ILLQPSLPQNQLRSLPALPLILLQPSLPLNQLRSLPAHPLI 455 >AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical protein C36B7.5b protein. Length = 1148 Score = 28.3 bits (60), Expect = 3.8 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = -1 Query: 503 NRGCMCGISCEWCSMRSVSCNR 438 NR C+ G+SCE S + CN+ Sbjct: 469 NRECIDGVSCEGASEEKILCNQ 490 >AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical protein C36B7.5a protein. Length = 1121 Score = 28.3 bits (60), Expect = 3.8 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = -1 Query: 503 NRGCMCGISCEWCSMRSVSCNR 438 NR C+ G+SCE S + CN+ Sbjct: 469 NRECIDGVSCEGASEEKILCNQ 490 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,088,248 Number of Sequences: 27780 Number of extensions: 100984 Number of successful extensions: 485 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 435 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 483 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1091917214 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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