Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0720
         (605 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK131480-1|BAD18625.1|  325|Homo sapiens protein ( Homo sapiens ...    34   0.34 
AF336342-1|AAK37518.1|  330|Homo sapiens tandem pore domain pota...    33   1.0  
AF294350-1|AAK97091.1|  330|Homo sapiens tandem acid-sensitive p...    33   1.0  
AF257081-1|AAG33127.1|  330|Homo sapiens two pore potassium chan...    33   1.0  
BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor, argini...    32   1.8  
BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor, argini...    32   1.8  
BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor, argini...    32   1.8  
AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR pr...    32   1.8  
AB032998-1|BAA86486.1|  929|Homo sapiens KIAA1172 protein protein.     32   1.8  
BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor, argini...    31   2.4  
X77909-1|CAA54867.1|  381|Homo sapiens IKBL protein.                   30   7.3  
BC003148-1|AAH03148.1|  476|Homo sapiens G patch domain and KOW ...    30   7.3  
BC000397-1|AAH00397.1|  476|Homo sapiens G patch domain and KOW ...    30   7.3  
AB209806-1|BAD93043.1|  475|Homo sapiens G patch domain and KOW ...    30   7.3  

>AK131480-1|BAD18625.1|  325|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16652 fis, clone TESTI4036767. ).
          Length = 325

 Score = 34.3 bits (75), Expect = 0.34
 Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
 Frame = +2

Query: 332 RQRERDDVPPHR--QRPPSLRAPHAAPRAQQWTSERDVEHVGGERVECHEREQCGAQHRL 505
           R R     P HR  QR P+ RAP   PR +    +RD  H   +R   H   Q G  HR 
Sbjct: 115 RHRAPQRSPRHRAPQRDPTHRAPQRGPRHR--APQRDPTHRAPQRGPRHRAPQRGPTHRA 172

Query: 506 AQ 511
            Q
Sbjct: 173 PQ 174



 Score = 33.9 bits (74), Expect = 0.45
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
 Frame = +2

Query: 332 RQRERDDVPPHR--QRPPSLRAPHAAPRAQQWTSERDVEHVGGERVECHEREQCGAQHRL 505
           R  +RD  P HR  QR P+ RAP   PR +    +R   H   +R   H   Q G +HR 
Sbjct: 90  RAPQRD--PTHRAPQRDPTHRAPQRGPRHR--APQRSPRHRAPQRDPTHRAPQRGPRHRA 145

Query: 506 AQ 511
            Q
Sbjct: 146 PQ 147


>AF336342-1|AAK37518.1|  330|Homo sapiens tandem pore domain
           potassium channel TASK-5 protein.
          Length = 330

 Score = 32.7 bits (71), Expect = 1.0
 Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
 Frame = +2

Query: 350 DVPPHRQRPPSLRAPHAAPRAQQWTSERDVEHVGGERVEC--HEREQC 487
           D P    RPPS R P A      W   R    VG   V C  H+ E+C
Sbjct: 252 DWPERAARPPSPRPPGAPESRGLWLPRRPARSVGSASVFCHVHKLERC 299


>AF294350-1|AAK97091.1|  330|Homo sapiens tandem acid-sensitive
           potassium channel TASK5 protein.
          Length = 330

 Score = 32.7 bits (71), Expect = 1.0
 Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
 Frame = +2

Query: 350 DVPPHRQRPPSLRAPHAAPRAQQWTSERDVEHVGGERVEC--HEREQC 487
           D P    RPPS R P A      W   R    VG   V C  H+ E+C
Sbjct: 252 DWPERAARPPSPRPPGAPESRGLWLPRRPARSVGSASVFCHVHKLERC 299


>AF257081-1|AAG33127.1|  330|Homo sapiens two pore potassium channel
           KT3.3 protein.
          Length = 330

 Score = 32.7 bits (71), Expect = 1.0
 Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
 Frame = +2

Query: 350 DVPPHRQRPPSLRAPHAAPRAQQWTSERDVEHVGGERVEC--HEREQC 487
           D P    RPPS R P A      W   R    VG   V C  H+ E+C
Sbjct: 252 DWPERAARPPSPRPPGAPESRGLWLPRRPARSVGSASVFCHVHKLERC 299


>BC064990-1|AAH64990.1| 1147|Homo sapiens splicing factor,
            arginine/serine-rich 15 protein.
          Length = 1147

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
 Frame = +2

Query: 332  RQRERDDVPPHRQRPPSLRAPH--AAPRAQQWTSERDVEHVG----GERVECHEREQCG 490
            +Q+++   PP +Q PP+ + P        QQ+ S RD E  G    G RVE ++RE+ G
Sbjct: 960  QQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVE-NDRERYG 1017


>BC052286-1|AAH52286.1| 1147|Homo sapiens splicing factor,
            arginine/serine-rich 15 protein.
          Length = 1147

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
 Frame = +2

Query: 332  RQRERDDVPPHRQRPPSLRAPH--AAPRAQQWTSERDVEHVG----GERVECHEREQCG 490
            +Q+++   PP +Q PP+ + P        QQ+ S RD E  G    G RVE ++RE+ G
Sbjct: 960  QQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVE-NDRERYG 1017


>BC014921-1|AAH14921.1| 1147|Homo sapiens splicing factor,
            arginine/serine-rich 15 protein.
          Length = 1147

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
 Frame = +2

Query: 332  RQRERDDVPPHRQRPPSLRAPH--AAPRAQQWTSERDVEHVG----GERVECHEREQCG 490
            +Q+++   PP +Q PP+ + P        QQ+ S RD E  G    G RVE ++RE+ G
Sbjct: 960  QQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVE-NDRERYG 1017


>AF023142-1|AAD09327.1| 1157|Homo sapiens pre-mRNA splicing SR protein
            rA4 protein.
          Length = 1157

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
 Frame = +2

Query: 332  RQRERDDVPPHRQRPPSLRAPH--AAPRAQQWTSERDVEHVG----GERVECHEREQCG 490
            +Q+++   PP +Q PP+ + P        QQ+ S RD E  G    G RVE ++RE+ G
Sbjct: 970  QQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVE-NDRERYG 1027


>AB032998-1|BAA86486.1|  929|Homo sapiens KIAA1172 protein protein.
          Length = 929

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
 Frame = +2

Query: 332 RQRERDDVPPHRQRPPSLRAPH--AAPRAQQWTSERDVEHVG----GERVECHEREQCG 490
           +Q+++   PP +Q PP+ + P        QQ+ S RD E  G    G RVE ++RE+ G
Sbjct: 742 QQQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVE-NDRERYG 799


>BC043353-1|AAH43353.1| 1146|Homo sapiens splicing factor,
            arginine/serine-rich 15 protein.
          Length = 1146

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
 Frame = +2

Query: 335  QRERDDVPPHRQRPPSLRAPH--AAPRAQQWTSERDVEHVG----GERVECHEREQCG 490
            Q+++   PP +Q PP+ + P        QQ+ S RD E  G    G RVE ++RE+ G
Sbjct: 960  QQQQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVE-NDRERYG 1016


>X77909-1|CAA54867.1|  381|Homo sapiens IKBL protein.
          Length = 381

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 16/50 (32%), Positives = 23/50 (46%)
 Frame = +2

Query: 365 RQRPPSLRAPHAAPRAQQWTSERDVEHVGGERVECHEREQCGAQHRLAQE 514
           R+   S R P A   +Q W  E + + +  ER    E E   ++ R AQE
Sbjct: 218 REAEGSCRPPRAEGSSQSWRHEEEEQRLFRERARAKEEELRESRARRAQE 267


>BC003148-1|AAH03148.1|  476|Homo sapiens G patch domain and KOW
           motifs protein.
          Length = 476

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 314 YIVEWRRQRERDDVPPHRQRPPSLRAPHAAPRAQQW 421
           YI +   +R+R  +P  RQ  P+ ++  AAPR+Q W
Sbjct: 323 YIQQDNSERKRKHLPD-RQDGPAAKSEKAAPRSQHW 357


>BC000397-1|AAH00397.1|  476|Homo sapiens G patch domain and KOW
           motifs protein.
          Length = 476

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 314 YIVEWRRQRERDDVPPHRQRPPSLRAPHAAPRAQQW 421
           YI +   +R+R  +P  RQ  P+ ++  AAPR+Q W
Sbjct: 323 YIQQDNSERKRKHLPD-RQDGPAAKSEKAAPRSQHW 357


>AB209806-1|BAD93043.1|  475|Homo sapiens G patch domain and KOW
           motifs variant protein.
          Length = 475

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 314 YIVEWRRQRERDDVPPHRQRPPSLRAPHAAPRAQQW 421
           YI +   +R+R  +P  RQ  P+ ++  AAPR+Q W
Sbjct: 322 YIQQDNSERKRKHLPD-RQDGPAAKSEKAAPRSQHW 356


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,330,629
Number of Sequences: 237096
Number of extensions: 677425
Number of successful extensions: 2667
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2656
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)