Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0720
         (605 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1529|AAF47983.2| 2602|Drosophila melanogaster CG2174-PA...    29   4.9  
AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB...    29   4.9  

>AE014298-1529|AAF47983.2| 2602|Drosophila melanogaster CG2174-PA,
            isoform A protein.
          Length = 2602

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +2

Query: 356  PPHRQRPPSLRAPHAAPRAQQWTSERDVEHVGGERVECHEREQCGA--QHRLAQEH 517
            PP  Q PP+ R+P   P  +  +S+   EHV    ++  ER+  GA  Q ++   H
Sbjct: 1455 PPAPQSPPTARSPEPEPDYRTSSSQVVKEHVPA-FIQRQERDTFGAVRQQQMISSH 1509


>AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB,
            isoform B protein.
          Length = 2693

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +2

Query: 356  PPHRQRPPSLRAPHAAPRAQQWTSERDVEHVGGERVECHEREQCGA--QHRLAQEH 517
            PP  Q PP+ R+P   P  +  +S+   EHV    ++  ER+  GA  Q ++   H
Sbjct: 1546 PPAPQSPPTARSPEPEPDYRTSSSQVVKEHVPA-FIQRQERDTFGAVRQQQMISSH 1600


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,092,708
Number of Sequences: 53049
Number of extensions: 215956
Number of successful extensions: 851
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)