Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0719
(604 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC014018-1|AAH14018.1| 491|Homo sapiens La ribonucleoprotein do... 137 3e-32
BC009446-1|AAH09446.1| 491|Homo sapiens La ribonucleoprotein do... 137 3e-32
BC006082-1|AAH06082.1| 491|Homo sapiens La ribonucleoprotein do... 137 3e-32
AF443829-1|AAN76711.1| 491|Homo sapiens acheron protein. 137 3e-32
AF443828-1|AAN76710.1| 491|Homo sapiens acheron protein. 137 3e-32
AK002058-1|BAA92061.1| 491|Homo sapiens protein ( Homo sapiens ... 133 4e-31
BC066945-1|AAH66945.1| 582|Homo sapiens LARP7 protein protein. 87 6e-17
X13697-1|CAA31985.1| 408|Homo sapiens protein ( Human mRNA for ... 64 4e-10
J04205-1|AAA51885.1| 408|Homo sapiens La protein protein. 64 4e-10
BT009862-1|AAP88864.1| 408|Homo sapiens Sjogren syndrome antige... 64 4e-10
BC020818-1|AAH20818.1| 408|Homo sapiens Sjogren syndrome antige... 64 4e-10
BC001289-1|AAH01289.1| 408|Homo sapiens Sjogren syndrome antige... 64 4e-10
AC009967-1|AAY14868.1| 408|Homo sapiens unknown protein. 64 4e-10
BC110300-1|AAI10301.1| 335|Homo sapiens LARP2 protein protein. 56 1e-07
AK001240-1|BAA91576.1| 328|Homo sapiens protein ( Homo sapiens ... 56 1e-07
AK092764-1|BAC03970.1| 575|Homo sapiens protein ( Homo sapiens ... 54 3e-07
BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein do... 53 7e-07
AK091465-1|BAC03668.1| 816|Homo sapiens protein ( Homo sapiens ... 53 7e-07
AB018274-1|BAA34451.1| 1096|Homo sapiens KIAA0731 protein protein. 53 7e-07
BC063479-1|AAH63479.1| 374|Homo sapiens LARP4 protein protein. 50 6e-06
BC022377-1|AAH22377.1| 188|Homo sapiens LARP4 protein protein. 50 6e-06
AY004310-1|AAF86614.1| 375|Homo sapiens c-Mpl binding protein p... 50 6e-06
AK125113-1|BAC86052.1| 654|Homo sapiens protein ( Homo sapiens ... 50 6e-06
DQ185046-1|ABD14426.1| 48|Homo sapiens Sjogren syndrome antige... 33 1.0
BC061698-1|AAH61698.1| 326|Homo sapiens nucleoporin 35kDa protein. 30 5.4
BC047029-1|AAH47029.1| 326|Homo sapiens NUP35 protein protein. 30 5.4
AF514993-1|AAM76704.1| 326|Homo sapiens nucleoporin Nup35 protein. 30 5.4
AF411516-1|AAL86379.1| 326|Homo sapiens mitotic phosphoprotein ... 30 5.4
AC079249-1|AAX88896.1| 193|Homo sapiens unknown protein. 30 5.4
>BC014018-1|AAH14018.1| 491|Homo sapiens La ribonucleoprotein
domain family, member 6 protein.
Length = 491
Score = 137 bits (331), Expect = 3e-32
Identities = 64/109 (58%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
Frame = +2
Query: 203 ETQEPPYTPPDEELANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRV 382
E E + PPDEEL ++V Q+EFYFSD N+ KDAFLLKHVRRNK GYVS+KL++SFK+V
Sbjct: 79 EDLEQEWKPPDEELIKKLVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKV 138
Query: 383 KHLTKDWRVVAEALKRSTKLEINELGTKLRRIDPLPAY-DETTPSRTVV 526
KHLT+DWR A ALK S LE+NE K+RR P+P + +E PS+ ++
Sbjct: 139 KHLTRDWRTTAHALKYSVVLELNEDHRKVRRTTPVPLFPNENLPSKMLL 187
>BC009446-1|AAH09446.1| 491|Homo sapiens La ribonucleoprotein
domain family, member 6 protein.
Length = 491
Score = 137 bits (331), Expect = 3e-32
Identities = 64/109 (58%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
Frame = +2
Query: 203 ETQEPPYTPPDEELANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRV 382
E E + PPDEEL ++V Q+EFYFSD N+ KDAFLLKHVRRNK GYVS+KL++SFK+V
Sbjct: 79 EDLEQEWKPPDEELIKKLVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKV 138
Query: 383 KHLTKDWRVVAEALKRSTKLEINELGTKLRRIDPLPAY-DETTPSRTVV 526
KHLT+DWR A ALK S LE+NE K+RR P+P + +E PS+ ++
Sbjct: 139 KHLTRDWRTTAHALKYSVVLELNEDHRKVRRTTPVPLFPNENLPSKMLL 187
>BC006082-1|AAH06082.1| 491|Homo sapiens La ribonucleoprotein
domain family, member 6 protein.
Length = 491
Score = 137 bits (331), Expect = 3e-32
Identities = 64/109 (58%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
Frame = +2
Query: 203 ETQEPPYTPPDEELANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRV 382
E E + PPDEEL ++V Q+EFYFSD N+ KDAFLLKHVRRNK GYVS+KL++SFK+V
Sbjct: 79 EDLEQEWKPPDEELIKKLVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKV 138
Query: 383 KHLTKDWRVVAEALKRSTKLEINELGTKLRRIDPLPAY-DETTPSRTVV 526
KHLT+DWR A ALK S LE+NE K+RR P+P + +E PS+ ++
Sbjct: 139 KHLTRDWRTTAHALKYSVVLELNEDHRKVRRTTPVPLFPNENLPSKMLL 187
>AF443829-1|AAN76711.1| 491|Homo sapiens acheron protein.
Length = 491
Score = 137 bits (331), Expect = 3e-32
Identities = 64/109 (58%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
Frame = +2
Query: 203 ETQEPPYTPPDEELANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRV 382
E E + PPDEEL ++V Q+EFYFSD N+ KDAFLLKHVRRNK GYVS+KL++SFK+V
Sbjct: 79 EDLEQEWKPPDEELIKKLVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKV 138
Query: 383 KHLTKDWRVVAEALKRSTKLEINELGTKLRRIDPLPAY-DETTPSRTVV 526
KHLT+DWR A ALK S LE+NE K+RR P+P + +E PS+ ++
Sbjct: 139 KHLTRDWRTTAHALKYSVVLELNEDHRKVRRTTPVPLFPNENLPSKMLL 187
>AF443828-1|AAN76710.1| 491|Homo sapiens acheron protein.
Length = 491
Score = 137 bits (331), Expect = 3e-32
Identities = 64/109 (58%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
Frame = +2
Query: 203 ETQEPPYTPPDEELANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRV 382
E E + PPDEEL ++V Q+EFYFSD N+ KDAFLLKHVRRNK GYVS+KL++SFK+V
Sbjct: 79 EDLEQEWKPPDEELIKKLVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKV 138
Query: 383 KHLTKDWRVVAEALKRSTKLEINELGTKLRRIDPLPAY-DETTPSRTVV 526
KHLT+DWR A ALK S LE+NE K+RR P+P + +E PS+ ++
Sbjct: 139 KHLTRDWRTTAHALKYSVVLELNEDHRKVRRTTPVPLFPNENLPSKMLL 187
>AK002058-1|BAA92061.1| 491|Homo sapiens protein ( Homo sapiens
cDNA FLJ11196 fis, clone PLACE1007688, weakly similar to
LA PROTEIN HOMOLOG. ).
Length = 491
Score = 133 bits (322), Expect = 4e-31
Identities = 63/109 (57%), Positives = 81/109 (74%), Gaps = 1/109 (0%)
Frame = +2
Query: 203 ETQEPPYTPPDEELANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRV 382
E E + PPDEEL ++V Q+EF FSD N+ KDAFLLKHVRRNK GYVS+KL++SFK+V
Sbjct: 79 EDLEQEWKPPDEELIKKLVDQIEFCFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKV 138
Query: 383 KHLTKDWRVVAEALKRSTKLEINELGTKLRRIDPLPAY-DETTPSRTVV 526
KHLT+DWR A ALK S LE+NE K+RR P+P + +E PS+ ++
Sbjct: 139 KHLTRDWRTTAHALKYSVVLELNEDHRKVRRTTPVPLFPNENLPSKMLL 187
>BC066945-1|AAH66945.1| 582|Homo sapiens LARP7 protein protein.
Length = 582
Score = 86.6 bits (205), Expect = 6e-17
Identities = 41/115 (35%), Positives = 70/115 (60%)
Frame = +2
Query: 254 IVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEALKRS 433
I QV+F+F DAN+ KD FL + + ++++GYV + L+ SF ++K LT D +++A AL+ S
Sbjct: 38 IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSS 97
Query: 434 TKLEINELGTKLRRIDPLPAYDETTPSRTVVAVRMPVEKPSVENVSRLFAGCGEI 598
+E++ GT++RR PL + RTV +P + + + R+F CG +
Sbjct: 98 AVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLP-KNVNHSWIERVFGKCGNV 151
>X13697-1|CAA31985.1| 408|Homo sapiens protein ( Human mRNA for
ribonucleoprotein SS-B/La. ).
Length = 408
Score = 64.1 bits (149), Expect = 4e-10
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Frame = +2
Query: 242 LANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEA 421
L +I Q+E+YF D N+ +D FL + ++ + EG+V L+++ F R+ LT D+ V+ EA
Sbjct: 13 LEAKICHQIEYYFGDFNLPRDKFLKEQIKLD-EGWVPLEIMIKFNRLNRLTTDFNVIVEA 71
Query: 422 LKRSTK--LEINELGTKLRR--IDPLP 490
L +S +EI+E TK+RR PLP
Sbjct: 72 LSKSKAELMEISEDKTKIRRSPSKPLP 98
>J04205-1|AAA51885.1| 408|Homo sapiens La protein protein.
Length = 408
Score = 64.1 bits (149), Expect = 4e-10
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Frame = +2
Query: 242 LANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEA 421
L +I Q+E+YF D N+ +D FL + ++ + EG+V L+++ F R+ LT D+ V+ EA
Sbjct: 13 LEAKICHQIEYYFGDFNLPRDKFLKEQIKLD-EGWVPLEIMIKFNRLNRLTTDFNVIVEA 71
Query: 422 LKRSTK--LEINELGTKLRR--IDPLP 490
L +S +EI+E TK+RR PLP
Sbjct: 72 LSKSKAELMEISEDKTKIRRSPSKPLP 98
>BT009862-1|AAP88864.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 64.1 bits (149), Expect = 4e-10
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Frame = +2
Query: 242 LANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEA 421
L +I Q+E+YF D N+ +D FL + ++ + EG+V L+++ F R+ LT D+ V+ EA
Sbjct: 13 LEAKICHQIEYYFGDFNLPRDKFLKEQIKLD-EGWVPLEIMIKFNRLNRLTTDFNVIVEA 71
Query: 422 LKRSTK--LEINELGTKLRR--IDPLP 490
L +S +EI+E TK+RR PLP
Sbjct: 72 LSKSKAELMEISEDKTKIRRSPSKPLP 98
>BC020818-1|AAH20818.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 64.1 bits (149), Expect = 4e-10
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Frame = +2
Query: 242 LANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEA 421
L +I Q+E+YF D N+ +D FL + ++ + EG+V L+++ F R+ LT D+ V+ EA
Sbjct: 13 LEAKICHQIEYYFGDFNLPRDKFLKEQIKLD-EGWVPLEIMIKFNRLNRLTTDFNVIVEA 71
Query: 422 LKRSTK--LEINELGTKLRR--IDPLP 490
L +S +EI+E TK+RR PLP
Sbjct: 72 LSKSKAELMEISEDKTKIRRSPSKPLP 98
>BC001289-1|AAH01289.1| 408|Homo sapiens Sjogren syndrome antigen B
(autoantigen La) protein.
Length = 408
Score = 64.1 bits (149), Expect = 4e-10
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Frame = +2
Query: 242 LANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEA 421
L +I Q+E+YF D N+ +D FL + ++ + EG+V L+++ F R+ LT D+ V+ EA
Sbjct: 13 LEAKICHQIEYYFGDFNLPRDKFLKEQIKLD-EGWVPLEIMIKFNRLNRLTTDFNVIVEA 71
Query: 422 LKRSTK--LEINELGTKLRR--IDPLP 490
L +S +EI+E TK+RR PLP
Sbjct: 72 LSKSKAELMEISEDKTKIRRSPSKPLP 98
>AC009967-1|AAY14868.1| 408|Homo sapiens unknown protein.
Length = 408
Score = 64.1 bits (149), Expect = 4e-10
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Frame = +2
Query: 242 LANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEA 421
L +I Q+E+YF D N+ +D FL + ++ + EG+V L+++ F R+ LT D+ V+ EA
Sbjct: 13 LEAKICHQIEYYFGDFNLPRDKFLKEQIKLD-EGWVPLEIMIKFNRLNRLTTDFNVIVEA 71
Query: 422 LKRSTK--LEINELGTKLRR--IDPLP 490
L +S +EI+E TK+RR PLP
Sbjct: 72 LSKSKAELMEISEDKTKIRRSPSKPLP 98
>BC110300-1|AAI10301.1| 335|Homo sapiens LARP2 protein protein.
Length = 335
Score = 56.0 bits (129), Expect = 1e-07
Identities = 32/88 (36%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Frame = +2
Query: 227 PPDEELANRIVS-QVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDW 403
P +E L + Q+E+YFS N+ +D FL + +++G++ + LI+ F+RV+ LT +
Sbjct: 209 PVEEALLKEYIKRQIEYYFSVENLERDFFL--RGKMDEQGFLPISLIAGFQRVQALTTNL 266
Query: 404 RVVAEALKRSTKLEINELGTKLR-RIDP 484
++ EALK ST++EI + K+R +I+P
Sbjct: 267 NLILEALKDSTEVEI--VDEKMRKKIEP 292
>AK001240-1|BAA91576.1| 328|Homo sapiens protein ( Homo sapiens
cDNA FLJ10378 fis, clone NT2RM2002004, weakly similar to
LA PROTEIN HOMOLOG. ).
Length = 328
Score = 56.0 bits (129), Expect = 1e-07
Identities = 32/88 (36%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Frame = +2
Query: 227 PPDEELANRIVS-QVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDW 403
P +E L + Q+E+YFS N+ +D FL + +++G++ + LI+ F+RV+ LT +
Sbjct: 15 PVEEALLKEYIKRQIEYYFSVENLERDFFL--RGKMDEQGFLPISLIAGFQRVQALTTNL 72
Query: 404 RVVAEALKRSTKLEINELGTKLRR-IDP 484
++ EALK ST++EI + K+R+ I+P
Sbjct: 73 NLILEALKDSTEVEI--VDEKMRKEIEP 98
>AK092764-1|BAC03970.1| 575|Homo sapiens protein ( Homo sapiens
cDNA FLJ35445 fis, clone SMINT2003551, weakly similar to
Drosophila melanogaster La related protein (larp) mRNA.
).
Length = 575
Score = 54.4 bits (125), Expect = 3e-07
Identities = 31/88 (35%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Frame = +2
Query: 227 PPDEELANRIVS-QVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDW 403
P +E L + Q+E+YFS N+ +D FL + +++G++ + LI+ F+RV+ LT +
Sbjct: 162 PVEEALLKEYIKRQIEYYFSVENLERDFFL--RGKMDEQGFLPISLIAGFQRVQALTTNL 219
Query: 404 RVVAEALKRSTKLEINELGTKLR-RIDP 484
++ E LK ST++EI + K+R +I+P
Sbjct: 220 NLILEVLKDSTEVEI--VDEKMRKKIEP 245
>BC001460-1|AAH01460.2| 1019|Homo sapiens La ribonucleoprotein
domain family, member 1 protein.
Length = 1019
Score = 53.2 bits (122), Expect = 7e-07
Identities = 32/85 (37%), Positives = 52/85 (61%)
Frame = +2
Query: 221 YTPPDEELANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKD 400
Y+ E L + I Q+E+YFS N+ +D FL + + + +G++ + LI+SF RV+ LT D
Sbjct: 319 YSVDQELLKDYIKRQIEYYFSVDNLERDFFLRR--KMDADGFLPITLIASFHRVQALTTD 376
Query: 401 WRVVAEALKRSTKLEINELGTKLRR 475
++ ALK S +EI + K+RR
Sbjct: 377 ISLIFAALKDSKVVEI--VDEKVRR 399
>AK091465-1|BAC03668.1| 816|Homo sapiens protein ( Homo sapiens
cDNA FLJ34146 fis, clone FCBBF3011889, weakly similar to
Drosophila melanogaster La related protein (larp) mRNA.
).
Length = 816
Score = 53.2 bits (122), Expect = 7e-07
Identities = 32/85 (37%), Positives = 52/85 (61%)
Frame = +2
Query: 221 YTPPDEELANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKD 400
Y+ E L + I Q+E+YFS N+ +D FL + + + +G++ + LI+SF RV+ LT D
Sbjct: 396 YSVDQELLKDYIKRQIEYYFSVDNLERDFFLRR--KMDADGFLPITLIASFHRVQALTTD 453
Query: 401 WRVVAEALKRSTKLEINELGTKLRR 475
++ ALK S +EI + K+RR
Sbjct: 454 ISLIFAALKDSKVVEI--VDEKVRR 476
>AB018274-1|BAA34451.1| 1096|Homo sapiens KIAA0731 protein protein.
Length = 1096
Score = 53.2 bits (122), Expect = 7e-07
Identities = 32/85 (37%), Positives = 52/85 (61%)
Frame = +2
Query: 221 YTPPDEELANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKD 400
Y+ E L + I Q+E+YFS N+ +D FL + + + +G++ + LI+SF RV+ LT D
Sbjct: 396 YSVDQELLKDYIKRQIEYYFSVDNLERDFFLRR--KMDADGFLPITLIASFHRVQALTTD 453
Query: 401 WRVVAEALKRSTKLEINELGTKLRR 475
++ ALK S +EI + K+RR
Sbjct: 454 ISLIFAALKDSKVVEI--VDEKVRR 476
>BC063479-1|AAH63479.1| 374|Homo sapiens LARP4 protein protein.
Length = 374
Score = 50.0 bits (114), Expect = 6e-06
Identities = 31/115 (26%), Positives = 62/115 (53%)
Frame = +2
Query: 236 EELANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVA 415
E+L + Q+EF FS N++KD +L+ + + + ++ + +++ + +K LT D ++
Sbjct: 117 EDLKECLKKQLEFCFSRENLSKDLYLISQM--DSDQFIPIWTVANMEEIKKLTTDPDLIL 174
Query: 416 EALKRSTKLEINELGTKLRRIDPLPAYDETTPSRTVVAVRMPVEKPSVENVSRLF 580
E L+ S ++++E G K+R P++ R +V +R E +E V LF
Sbjct: 175 EVLRSSPMVQVDEKGEKVR-----PSH-----KRCIVILREIPETTPIEEVKGLF 219
>BC022377-1|AAH22377.1| 188|Homo sapiens LARP4 protein protein.
Length = 188
Score = 50.0 bits (114), Expect = 6e-06
Identities = 31/115 (26%), Positives = 62/115 (53%)
Frame = +2
Query: 236 EELANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVA 415
E+L + Q+EF FS N++KD +L+ + + + ++ + +++ + +K LT D ++
Sbjct: 47 EDLKECLKKQLEFCFSRENLSKDLYLISQM--DSDQFIPIWTVANMEEIKKLTTDPDLIL 104
Query: 416 EALKRSTKLEINELGTKLRRIDPLPAYDETTPSRTVVAVRMPVEKPSVENVSRLF 580
E L+ S ++++E G K+R P++ R +V +R E +E V LF
Sbjct: 105 EVLRSSPMVQVDEKGEKVR-----PSH-----KRCIVILREIPETTPIEEVKGLF 149
>AY004310-1|AAF86614.1| 375|Homo sapiens c-Mpl binding protein
protein.
Length = 375
Score = 50.0 bits (114), Expect = 6e-06
Identities = 31/115 (26%), Positives = 62/115 (53%)
Frame = +2
Query: 236 EELANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVA 415
E+L + Q+EF FS N++KD +L+ + + + ++ + +++ + +K LT D ++
Sbjct: 47 EDLKECLKKQLEFCFSRENLSKDLYLISQM--DSDQFIPIWTVANMEEIKKLTTDPDLIL 104
Query: 416 EALKRSTKLEINELGTKLRRIDPLPAYDETTPSRTVVAVRMPVEKPSVENVSRLF 580
E L+ S ++++E G K+R P++ R +V +R E +E V LF
Sbjct: 105 EVLRSSPMVQVDEKGEKVR-----PSH-----KRCIVILREIPETTPIEEVKGLF 149
>AK125113-1|BAC86052.1| 654|Homo sapiens protein ( Homo sapiens
cDNA FLJ43123 fis, clone CTONG3003972. ).
Length = 654
Score = 50.0 bits (114), Expect = 6e-06
Identities = 31/115 (26%), Positives = 62/115 (53%)
Frame = +2
Query: 236 EELANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVA 415
E+L + Q+EF FS N++KD +L+ + + + ++ + +++ + +K LT D ++
Sbjct: 47 EDLKECLKKQLEFCFSRENLSKDLYLISQM--DSDQFIPIWTVANMEEIKKLTTDPDLIL 104
Query: 416 EALKRSTKLEINELGTKLRRIDPLPAYDETTPSRTVVAVRMPVEKPSVENVSRLF 580
E L+ S ++++E G K+R P++ R +V +R E +E V LF
Sbjct: 105 EVLRSSPMVQVDEKGEKVR-----PSH-----KRCIVILREIPETTPIEEVKGLF 149
>DQ185046-1|ABD14426.1| 48|Homo sapiens Sjogren syndrome antigen B
protein.
Length = 48
Score = 32.7 bits (71), Expect = 1.0
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +2
Query: 242 LANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYV 349
L +I Q+E+YF D N+ +D FL + ++ + EG+V
Sbjct: 13 LEAKICHQIEYYFGDFNLPRDKFLKEQIKLD-EGWV 47
>BC061698-1|AAH61698.1| 326|Homo sapiens nucleoporin 35kDa protein.
Length = 326
Score = 30.3 bits (65), Expect = 5.4
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +2
Query: 311 LLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEALKRSTK--LEINELGTKLRRIDP 484
+LKHV N ++ ++ S + K L+KD R+ E++ K ++ + + + R
Sbjct: 199 ILKHVMSNTGNWMHIRYQSKLQARKALSKDGRIFGESIMIGVKPCIDKSVMESSDRCALS 258
Query: 485 LPAYDETTPSRTVVAVRMPVEKPSVENVSRL 577
P+ T P +T+ P P + + L
Sbjct: 259 SPSLAFTPPIKTLGTPTQPGSTPRISTMRPL 289
>BC047029-1|AAH47029.1| 326|Homo sapiens NUP35 protein protein.
Length = 326
Score = 30.3 bits (65), Expect = 5.4
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +2
Query: 311 LLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEALKRSTK--LEINELGTKLRRIDP 484
+LKHV N ++ ++ S + K L+KD R+ E++ K ++ + + + R
Sbjct: 199 ILKHVMSNTGNWMHIRYQSKLQARKALSKDGRIFGESIMIGVKPCIDKSVMESSDRCALS 258
Query: 485 LPAYDETTPSRTVVAVRMPVEKPSVENVSRL 577
P+ T P +T+ P P + + L
Sbjct: 259 SPSLAFTPPIKTLGTPTQPGSTPRISTMRPL 289
>AF514993-1|AAM76704.1| 326|Homo sapiens nucleoporin Nup35 protein.
Length = 326
Score = 30.3 bits (65), Expect = 5.4
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +2
Query: 311 LLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEALKRSTK--LEINELGTKLRRIDP 484
+LKHV N ++ ++ S + K L+KD R+ E++ K ++ + + + R
Sbjct: 199 ILKHVMSNTGNWMHIRYQSKLQARKALSKDGRIFGESIMIGVKPCIDKSVMESSDRCALS 258
Query: 485 LPAYDETTPSRTVVAVRMPVEKPSVENVSRL 577
P+ T P +T+ P P + + L
Sbjct: 259 SPSLAFTPPIKTLGTPTQPGSTPRISTMRPL 289
>AF411516-1|AAL86379.1| 326|Homo sapiens mitotic phosphoprotein 44
protein.
Length = 326
Score = 30.3 bits (65), Expect = 5.4
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +2
Query: 311 LLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEALKRSTK--LEINELGTKLRRIDP 484
+LKHV N ++ ++ S + K L+KD R+ E++ K ++ + + + R
Sbjct: 199 ILKHVMSNTGNWMHIRYQSKLQARKALSKDGRIFGESIMIGVKPCIDKSVMESSDRCALS 258
Query: 485 LPAYDETTPSRTVVAVRMPVEKPSVENVSRL 577
P+ T P +T+ P P + + L
Sbjct: 259 SPSLAFTPPIKTLGTPTQPGSTPRISTMRPL 289
>AC079249-1|AAX88896.1| 193|Homo sapiens unknown protein.
Length = 193
Score = 30.3 bits (65), Expect = 5.4
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +2
Query: 311 LLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEALKRSTK--LEINELGTKLRRIDP 484
+LKHV N ++ ++ S + K L+KD R+ E++ K ++ + + + R
Sbjct: 66 ILKHVMSNTGNWMHIRYQSKLQARKALSKDGRIFGESIMIGVKPCIDKSVMESSDRCALS 125
Query: 485 LPAYDETTPSRTVVAVRMPVEKPSVENVSRL 577
P+ T P +T+ P P + + L
Sbjct: 126 SPSLAFTPPIKTLGTPTQPGSTPRISTMRPL 156
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,473,434
Number of Sequences: 237096
Number of extensions: 1390030
Number of successful extensions: 5759
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 5579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5747
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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