Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0719
(604 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021348-1|AAX33496.1| 867|Drosophila melanogaster LP19379p pro... 177 1e-44
AE013599-1894|AAF58246.1| 867|Drosophila melanogaster CG17386-P... 177 1e-44
AY061107-1|AAL28655.1| 595|Drosophila melanogaster LD09531p pro... 69 4e-12
AF219009-1|AAF27644.1| 595|Drosophila melanogaster multi-sex-co... 69 4e-12
AE014298-1312|AAF46473.1| 595|Drosophila melanogaster CG12058-P... 69 4e-12
U07652-1|AAA20518.1| 390|Drosophila melanogaster La/SS-B protein. 65 8e-11
L32988-1|AAA21776.1| 390|Drosophila melanogaster La ribonucleop... 65 8e-11
AY075257-1|AAL68124.1| 390|Drosophila melanogaster AT22034p pro... 65 8e-11
AE014134-3230|AAN11073.1| 390|Drosophila melanogaster CG10922-P... 65 8e-11
AE014134-3229|AAF53885.1| 390|Drosophila melanogaster CG10922-P... 65 8e-11
AY113653-1|AAM29658.1| 269|Drosophila melanogaster SD18087p pro... 60 2e-09
AF221108-1|AAF35862.1| 1403|Drosophila melanogaster La related p... 60 2e-09
AE014297-4227|AAN14139.1| 965|Drosophila melanogaster CG14066-P... 60 2e-09
AE014297-4226|AAF56783.3| 965|Drosophila melanogaster CG14066-P... 60 2e-09
AE014297-4225|AAN14138.4| 1403|Drosophila melanogaster CG14066-P... 60 2e-09
BT003561-1|AAO39565.1| 568|Drosophila melanogaster LP04335p pro... 34 0.13
AE014297-703|AAF54197.1| 555|Drosophila melanogaster CG18249-PA... 34 0.13
AE014296-656|AAN11565.1| 717|Drosophila melanogaster CG12010-PB... 29 4.9
AE014296-655|AAF47769.1| 736|Drosophila melanogaster CG12010-PA... 29 4.9
BT001609-1|AAN71364.1| 319|Drosophila melanogaster RE31802p pro... 28 8.5
AE014134-1616|AAN10690.1| 319|Drosophila melanogaster CG4454-PB... 28 8.5
>BT021348-1|AAX33496.1| 867|Drosophila melanogaster LP19379p
protein.
Length = 867
Score = 177 bits (430), Expect = 1e-44
Identities = 82/130 (63%), Positives = 108/130 (83%), Gaps = 1/130 (0%)
Frame = +2
Query: 218 PYTPPDEELANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTK 397
P P EELA I VEFYFS+ +I KDAFLLKHVRRNKEG+VSLKL+SSFKRV+ LT+
Sbjct: 273 PSLIPSEELAAEITDAVEFYFSNESILKDAFLLKHVRRNKEGFVSLKLVSSFKRVRQLTR 332
Query: 398 DWRVVAEALKR-STKLEINELGTKLRRIDPLPAYDETTPSRTVVAVRMPVEKPSVENVSR 574
+W+VV +A++R S K+E+N++GTK+RRI+PLP++DET PSRT+VA +P++K ++E VS
Sbjct: 333 EWKVVGDAVRRKSRKIELNDVGTKVRRIEPLPSFDETMPSRTIVACDLPLDKLTIEKVSD 392
Query: 575 LFAGCGEIAL 604
LF+ CGEIAL
Sbjct: 393 LFSPCGEIAL 402
>AE013599-1894|AAF58246.1| 867|Drosophila melanogaster CG17386-PA
protein.
Length = 867
Score = 177 bits (430), Expect = 1e-44
Identities = 82/130 (63%), Positives = 108/130 (83%), Gaps = 1/130 (0%)
Frame = +2
Query: 218 PYTPPDEELANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTK 397
P P EELA I VEFYFS+ +I KDAFLLKHVRRNKEG+VSLKL+SSFKRV+ LT+
Sbjct: 273 PSLIPSEELAAEITDAVEFYFSNESILKDAFLLKHVRRNKEGFVSLKLVSSFKRVRQLTR 332
Query: 398 DWRVVAEALKR-STKLEINELGTKLRRIDPLPAYDETTPSRTVVAVRMPVEKPSVENVSR 574
+W+VV +A++R S K+E+N++GTK+RRI+PLP++DET PSRT+VA +P++K ++E VS
Sbjct: 333 EWKVVGDAVRRKSRKIELNDVGTKVRRIEPLPSFDETMPSRTIVACDLPLDKLTIEKVSD 392
Query: 575 LFAGCGEIAL 604
LF+ CGEIAL
Sbjct: 393 LFSPCGEIAL 402
>AY061107-1|AAL28655.1| 595|Drosophila melanogaster LD09531p
protein.
Length = 595
Score = 69.3 bits (162), Expect = 4e-12
Identities = 35/83 (42%), Positives = 55/83 (66%)
Frame = +2
Query: 242 LANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEA 421
L N I Q+EFYF DAN++KD FL ++V ++ YV L++ +F ++K LT+D + +A+A
Sbjct: 59 LFNSIRGQMEFYFGDANLSKDRFLRRYV--EQDPYVPLEIFLTFNKIKTLTQDVQQIAKA 116
Query: 422 LKRSTKLEINELGTKLRRIDPLP 490
L S LE++E K++R LP
Sbjct: 117 LSNSQLLELDETELKVKRRTKLP 139
>AF219009-1|AAF27644.1| 595|Drosophila melanogaster multi-sex-combs
protein.
Length = 595
Score = 69.3 bits (162), Expect = 4e-12
Identities = 35/83 (42%), Positives = 55/83 (66%)
Frame = +2
Query: 242 LANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEA 421
L N I Q+EFYF DAN++KD FL ++V ++ YV L++ +F ++K LT+D + +A+A
Sbjct: 59 LFNSIRGQMEFYFGDANLSKDRFLRRYV--EQDPYVPLEIFLTFNKIKTLTQDVQQIAKA 116
Query: 422 LKRSTKLEINELGTKLRRIDPLP 490
L S LE++E K++R LP
Sbjct: 117 LSNSQLLELDETELKVKRRTKLP 139
>AE014298-1312|AAF46473.1| 595|Drosophila melanogaster CG12058-PA
protein.
Length = 595
Score = 69.3 bits (162), Expect = 4e-12
Identities = 35/83 (42%), Positives = 55/83 (66%)
Frame = +2
Query: 242 LANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEA 421
L N I Q+EFYF DAN++KD FL ++V ++ YV L++ +F ++K LT+D + +A+A
Sbjct: 59 LFNSIRGQMEFYFGDANLSKDRFLRRYV--EQDPYVPLEIFLTFNKIKTLTQDVQQIAKA 116
Query: 422 LKRSTKLEINELGTKLRRIDPLP 490
L S LE++E K++R LP
Sbjct: 117 LSNSQLLELDETELKVKRRTKLP 139
>U07652-1|AAA20518.1| 390|Drosophila melanogaster La/SS-B protein.
Length = 390
Score = 64.9 bits (151), Expect = 8e-11
Identities = 33/87 (37%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Frame = +2
Query: 254 IVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEALKRS 433
I+ QVE+YF DAN+ +D FL + + +N++G+V L ++ +FKR+ L+ D + AL +S
Sbjct: 54 IIRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKS 113
Query: 434 TK--LEINELGTKLRRID--PLPAYDE 502
+ +EI+E LRR P+P ++E
Sbjct: 114 EEGLVEISEDKLSLRRHPERPIPEHNE 140
>L32988-1|AAA21776.1| 390|Drosophila melanogaster La
ribonucleoprotein protein.
Length = 390
Score = 64.9 bits (151), Expect = 8e-11
Identities = 33/87 (37%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Frame = +2
Query: 254 IVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEALKRS 433
I+ QVE+YF DAN+ +D FL + + +N++G+V L ++ +FKR+ L+ D + AL +S
Sbjct: 54 IIRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKS 113
Query: 434 TK--LEINELGTKLRRID--PLPAYDE 502
+ +EI+E LRR P+P ++E
Sbjct: 114 EEGLVEISEDKLSLRRHPERPIPEHNE 140
>AY075257-1|AAL68124.1| 390|Drosophila melanogaster AT22034p
protein.
Length = 390
Score = 64.9 bits (151), Expect = 8e-11
Identities = 33/87 (37%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Frame = +2
Query: 254 IVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEALKRS 433
I+ QVE+YF DAN+ +D FL + + +N++G+V L ++ +FKR+ L+ D + AL +S
Sbjct: 54 IIRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKS 113
Query: 434 TK--LEINELGTKLRRID--PLPAYDE 502
+ +EI+E LRR P+P ++E
Sbjct: 114 EEGLVEISEDKLSLRRHPERPIPEHNE 140
>AE014134-3230|AAN11073.1| 390|Drosophila melanogaster CG10922-PB,
isoform B protein.
Length = 390
Score = 64.9 bits (151), Expect = 8e-11
Identities = 33/87 (37%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Frame = +2
Query: 254 IVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEALKRS 433
I+ QVE+YF DAN+ +D FL + + +N++G+V L ++ +FKR+ L+ D + AL +S
Sbjct: 54 IIRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKS 113
Query: 434 TK--LEINELGTKLRRID--PLPAYDE 502
+ +EI+E LRR P+P ++E
Sbjct: 114 EEGLVEISEDKLSLRRHPERPIPEHNE 140
>AE014134-3229|AAF53885.1| 390|Drosophila melanogaster CG10922-PA,
isoform A protein.
Length = 390
Score = 64.9 bits (151), Expect = 8e-11
Identities = 33/87 (37%), Positives = 56/87 (64%), Gaps = 4/87 (4%)
Frame = +2
Query: 254 IVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEALKRS 433
I+ QVE+YF DAN+ +D FL + + +N++G+V L ++ +FKR+ L+ D + AL +S
Sbjct: 54 IIRQVEYYFGDANLNRDKFLREQIGKNEDGWVPLSVLVTFKRLASLSTDLSEIVAALNKS 113
Query: 434 TK--LEINELGTKLRRID--PLPAYDE 502
+ +EI+E LRR P+P ++E
Sbjct: 114 EEGLVEISEDKLSLRRHPERPIPEHNE 140
>AY113653-1|AAM29658.1| 269|Drosophila melanogaster SD18087p
protein.
Length = 269
Score = 60.5 bits (140), Expect = 2e-09
Identities = 35/73 (47%), Positives = 47/73 (64%)
Frame = +2
Query: 254 IVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEALKRS 433
I QVE+YFS N+T D FL + + + EGY+ + LI+SF RV LT D V+ A+K S
Sbjct: 25 IKKQVEYYFSVDNLTGDFFLRR--KMDPEGYIPVTLIASFHRVLALTTDVAVIVNAIKES 82
Query: 434 TKLEINELGTKLR 472
KLE+ E G K+R
Sbjct: 83 DKLELFE-GYKVR 94
>AF221108-1|AAF35862.1| 1403|Drosophila melanogaster La related
protein protein.
Length = 1403
Score = 60.5 bits (140), Expect = 2e-09
Identities = 35/73 (47%), Positives = 47/73 (64%)
Frame = +2
Query: 254 IVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEALKRS 433
I QVE+YFS N+T D FL + + + EGY+ + LI+SF RV LT D V+ A+K S
Sbjct: 463 IKKQVEYYFSVDNLTGDFFLRR--KMDPEGYIPVTLIASFHRVLALTTDVAVIVNAIKES 520
Query: 434 TKLEINELGTKLR 472
KLE+ E G K+R
Sbjct: 521 DKLELFE-GYKVR 532
>AE014297-4227|AAN14139.1| 965|Drosophila melanogaster CG14066-PB,
isoform B protein.
Length = 965
Score = 60.5 bits (140), Expect = 2e-09
Identities = 35/73 (47%), Positives = 47/73 (64%)
Frame = +2
Query: 254 IVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEALKRS 433
I QVE+YFS N+T D FL + + + EGY+ + LI+SF RV LT D V+ A+K S
Sbjct: 25 IKKQVEYYFSVDNLTGDFFLRR--KMDPEGYIPVTLIASFHRVLALTTDVAVIVNAIKES 82
Query: 434 TKLEINELGTKLR 472
KLE+ E G K+R
Sbjct: 83 DKLELFE-GYKVR 94
>AE014297-4226|AAF56783.3| 965|Drosophila melanogaster CG14066-PA,
isoform A protein.
Length = 965
Score = 60.5 bits (140), Expect = 2e-09
Identities = 35/73 (47%), Positives = 47/73 (64%)
Frame = +2
Query: 254 IVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEALKRS 433
I QVE+YFS N+T D FL + + + EGY+ + LI+SF RV LT D V+ A+K S
Sbjct: 25 IKKQVEYYFSVDNLTGDFFLRR--KMDPEGYIPVTLIASFHRVLALTTDVAVIVNAIKES 82
Query: 434 TKLEINELGTKLR 472
KLE+ E G K+R
Sbjct: 83 DKLELFE-GYKVR 94
>AE014297-4225|AAN14138.4| 1403|Drosophila melanogaster CG14066-PC,
isoform C protein.
Length = 1403
Score = 60.5 bits (140), Expect = 2e-09
Identities = 35/73 (47%), Positives = 47/73 (64%)
Frame = +2
Query: 254 IVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVVAEALKRS 433
I QVE+YFS N+T D FL + + + EGY+ + LI+SF RV LT D V+ A+K S
Sbjct: 463 IKKQVEYYFSVDNLTGDFFLRR--KMDPEGYIPVTLIASFHRVLALTTDVAVIVNAIKES 520
Query: 434 TKLEINELGTKLR 472
KLE+ E G K+R
Sbjct: 521 DKLELFE-GYKVR 532
>BT003561-1|AAO39565.1| 568|Drosophila melanogaster LP04335p
protein.
Length = 568
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3
Query: 254 FCSLIPRPVAYRAVPGSRLQLRSLNPCRRRS 162
FCSL RPVAY A P +L+ L C R+S
Sbjct: 48 FCSLSDRPVAYSATPALQLRELHLRNCSRQS 78
>AE014297-703|AAF54197.1| 555|Drosophila melanogaster CG18249-PA
protein.
Length = 555
Score = 34.3 bits (75), Expect = 0.13
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3
Query: 254 FCSLIPRPVAYRAVPGSRLQLRSLNPCRRRS 162
FCSL RPVAY A P +L+ L C R+S
Sbjct: 39 FCSLSDRPVAYSATPALQLRELHLRNCSRQS 69
>AE014296-656|AAN11565.1| 717|Drosophila melanogaster CG12010-PB,
isoform B protein.
Length = 717
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +2
Query: 311 LLKHVRRNKEGYVSLKLISSFKRVKH--LTKD 400
LL+H+ RN +GYV L +RV+ LTKD
Sbjct: 384 LLEHIARNTQGYVIADLTLLLRRVQQQLLTKD 415
>AE014296-655|AAF47769.1| 736|Drosophila melanogaster CG12010-PA,
isoform A protein.
Length = 736
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +2
Query: 311 LLKHVRRNKEGYVSLKLISSFKRVKH--LTKD 400
LL+H+ RN +GYV L +RV+ LTKD
Sbjct: 403 LLEHIARNTQGYVIADLTLLLRRVQQQLLTKD 434
>BT001609-1|AAN71364.1| 319|Drosophila melanogaster RE31802p
protein.
Length = 319
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 11 RLLCDRVLRGSHMEGTSPSSPRPNEDEGFATD 106
+LL + GS +EG +PS+ DEG+ T+
Sbjct: 91 QLLASMSMSGSAIEGHAPSATGSRNDEGYLTE 122
>AE014134-1616|AAN10690.1| 319|Drosophila melanogaster CG4454-PB,
isoform B protein.
Length = 319
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 11 RLLCDRVLRGSHMEGTSPSSPRPNEDEGFATD 106
+LL + GS +EG +PS+ DEG+ T+
Sbjct: 91 QLLASMSMSGSAIEGHAPSATGSRNDEGYLTE 122
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,403,081
Number of Sequences: 53049
Number of extensions: 447656
Number of successful extensions: 1498
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1487
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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