Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0718
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.26 
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    23   1.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    22   4.2  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   5.5  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   5.5  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   7.3  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    21   9.7  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    21   9.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   9.7  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   9.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 582  AFVSSDAPVFESRWRVPIFSNEIRTQQMFTIDFHGE 689
            A VS    V ++ + VP+ +  +    + T DFHG+
Sbjct: 1560 AAVSPSKTVIDAGYDVPVLAQNLDWVAVMTYDFHGQ 1595


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +3

Query: 465 PCGGDGTALDVCPCACAH 518
           P  G  TALDV P  C H
Sbjct: 35  PDNGKFTALDVDPTLCTH 52


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
 Frame = -1

Query: 453 ACCLPPRHTAR---YYFRGAP 400
           AC  PP+HT +    Y RG P
Sbjct: 440 ACYCPPKHTGKNCEIYDRGFP 460


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 360 YFRSINTGFGKIAQ 319
           YF  + TGFGKI Q
Sbjct: 110 YFWKMLTGFGKIEQ 123


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 328 FPKTSIDASKIFSKITSLCNVNIYW 402
           FP T I+ S I      L  +N+ W
Sbjct: 189 FPPTMINPSAICESAAQLIFMNVQW 213


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 478 SPPHGTADGMLSAATTYGTILFPG 407
           +PP  T    L A  ++GT L  G
Sbjct: 198 APPFATVGANLQATVSFGTNLVGG 221


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +3

Query: 465 PCGGDGTALDVCPCACAH 518
           P  G  TALD  P  C H
Sbjct: 36  PDNGKFTALDTDPNLCTH 53


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +3

Query: 465 PCGGDGTALDVCPCACAH 518
           P  G  TALD  P  C H
Sbjct: 36  PDNGKFTALDTDPNLCTH 53


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +2

Query: 254 PSPGAPSH 277
           PSPG PSH
Sbjct: 119 PSPGPPSH 126


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 12/38 (31%), Positives = 15/38 (39%)
 Frame = +1

Query: 379 LCNVNIYWRPPEIISCRMSWRQTACRQRCHAGETAPLS 492
           L N N+  +PP  +  R    Q   R   H     PLS
Sbjct: 259 LTNKNLVSKPPHEVEKRAQDGQYEYRSLSHVSLRPPLS 296


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,284
Number of Sequences: 336
Number of extensions: 4227
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)