Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0713
         (712 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   0.20 
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    24   1.4  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   4.3  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   7.5  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   9.9  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   9.9  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   9.9  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    21   9.9  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   9.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 274  ILKREQKWLRMLDNWEAFMSKNYKKVRERCRKGIPASVRPKAW 402
            +L  +Q  ++  D W  F +K Y+KV     KGI   V    W
Sbjct: 1861 VLNGDQLIIKPHDTWADFDNKFYEKVTAYKSKGIKVLVAIGGW 1903



 Score = 25.0 bits (52), Expect = 0.61
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +1

Query: 274  ILKREQKWLRMLDNWEAFMSKNYKKVRERCRKGIPASVRPKAW 402
            +L  E   ++  D+W  F ++ YK+V     KGI  S+    W
Sbjct: 1436 VLDFENLIVKAHDSWADFDNQFYKRVTGYKAKGIKVSLALGGW 1478



 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/43 (23%), Positives = 18/43 (41%)
 Frame = +1

Query: 274  ILKREQKWLRMLDNWEAFMSKNYKKVRERCRKGIPASVRPKAW 402
            +L      L+  D+W    ++ YKKV     +G+   +    W
Sbjct: 2359 VLDSSSMTLKPHDSWADIDNEFYKKVVSYKSRGVKVLIALGGW 2401


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 13/57 (22%), Positives = 29/57 (50%)
 Frame = +3

Query: 273 DIEERTEMASYA*QLGSVYEQELQESTRKMSKRYTSISEAESMVVPVRGTAPARKTS 443
           +I+++  + S+      V EQE  +   +M KRY+++  ++S  +   G+  +   S
Sbjct: 335 EIDDQGTVESFVCVNTLVSEQEGLQLINEMKKRYSALINSQSCPITSSGSTDSSSQS 391


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +1

Query: 439 HPNEYEELLQAPGDPKCMEDIRKDLHRQFPYHEMFIREEG 558
           H  + + L Q+  +P   E+++     QFP+H+ F+  EG
Sbjct: 107 HEIKLQHLHQSKFNPH--EEVKLQHLHQFPHHD-FLEREG 143


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 674 AGHVHERNAATGGLCLKYP 618
           AGH HE++AA       +P
Sbjct: 22  AGHHHEQSAAAAAAYRSFP 40


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 456 LVFVRMFFEQELSPAQVQPCFRPH 385
           +V   +F E   SPA   P F PH
Sbjct: 18  MVLAVVFQEITSSPAGRSPAFLPH 41


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 456 LVFVRMFFEQELSPAQVQPCFRPH 385
           +V   +F E   SPA   P F PH
Sbjct: 18  MVLAVVFQEITSSPAGRSPAFLPH 41


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 456 LVFVRMFFEQELSPAQVQPCFRPH 385
           +V   +F E   SPA   P F PH
Sbjct: 18  MVLAVVFQEITSSPAGRSPAFLPH 41


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 53  TPTTPPPPS 27
           +PTTPP PS
Sbjct: 94  SPTTPPTPS 102


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = -1

Query: 478 LRALGAIPRIRSDVFRAGAVPRTGTTMLSASLMLVYLFDI 359
           LR   ++P I S       V +TG T+   +++ +++FD+
Sbjct: 55  LRLFPSVPFI-SRYASEDFVTKTGNTIPEGTVLHIHIFDL 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,027
Number of Sequences: 336
Number of extensions: 3906
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)