Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0713
(712 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0654 - 19732679-19732837,19733234-19733479,19734470-197346... 81 1e-15
08_02_0271 - 15156737-15156868,15157134-15157235,15157342-151574... 51 8e-07
03_02_0596 + 9714022-9714065,9714799-9714868,9714978-9715883,971... 35 0.073
05_05_0145 - 22690212-22690472,22690701-22690818,22691125-226912... 33 0.30
01_06_1257 - 35778078-35778299,35778952-35779069,35779294-357794... 33 0.30
04_01_0256 + 3402982-3402984,3403077-3403158,3403307-3403449,340... 32 0.52
08_02_1480 + 27401923-27402158,27402847-27402982,27403119-274031... 30 2.1
02_01_0387 - 2804990-2805059,2805106-2806086,2806856-2806875 30 2.1
02_01_0547 + 4032161-4032418,4032747-4032953,4033216-4033569 29 3.6
10_08_1006 - 22194013-22196054,22197357-22198337,22198974-22199301 29 4.8
01_06_1509 - 37855894-37856679,37856766-37856952,37857508-378575... 29 4.8
11_06_0610 - 25449085-25453284 28 6.4
04_03_1049 + 22015053-22015083,22015770-22015885,22016013-220161... 28 6.4
02_05_0817 + 31994241-31995908 28 6.4
09_04_0684 - 19442335-19442990,19443774-19443839,19443935-194440... 28 8.4
07_03_0460 + 18425464-18427473 28 8.4
01_04_0010 - 15058175-15058195,15058320-15058430,15059031-150592... 28 8.4
>08_02_0654 -
19732679-19732837,19733234-19733479,19734470-19734667,
19735085-19735201,19735289-19735459,19735632-19735893,
19736205-19736353
Length = 433
Score = 80.6 bits (190), Expect = 1e-15
Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
Frame = +1
Query: 280 KREQKWLRML----DNWEAFMSKNYKKVRERCRKGIPASVRPKAWLYLCGGQLLLEKHPN 447
+R +KW +M+ +W+ ++ +N V+ R RKGIP +R W + G + LL +P
Sbjct: 75 RRIKKWRKMIGVGGSDWKHYVRRNPHVVKRRIRKGIPDCLRGLVWQLISGSRDLLLMNPG 134
Query: 448 EYEELLQAPGDPKCMEDIRKDLHRQFPYHEMFIREEGLGQQELFSVLKAYSVLNPKVGY 624
YE L+ +E IR D+ R FP H F + G GQ+ L++VLKAYSV + VGY
Sbjct: 135 VYETLVIYETSASELEIIR-DISRTFPSHIFFQQRHGPGQRSLYNVLKAYSVYDRDVGY 192
>08_02_0271 -
15156737-15156868,15157134-15157235,15157342-15157419,
15157523-15157616,15157736-15157872,15157989-15158105,
15158470-15158940
Length = 376
Score = 51.2 bits (117), Expect = 8e-07
Identities = 36/96 (37%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Frame = +1
Query: 349 VRERCRKGIPASVRPKAWLYLCGGQLLLEKHPNE-YEELLQA---PGDPKCMEDIRKDLH 516
+R RKG+P +RPK WL + G P Y+EL++A P ++ I DL
Sbjct: 102 LRRLIRKGVPPVLRPKVWLSVSGAAKKRSTVPETYYDELIRATEGKTTPATLQ-IDHDLP 160
Query: 517 RQFPYHEMFIREEGLGQQELFSVLKAYSVLNPKVGY 624
R FP H EE GQ L VL YS + +VGY
Sbjct: 161 RTFPCHSWLNSEE--GQASLRRVLVGYSFRDSEVGY 194
>03_02_0596 +
9714022-9714065,9714799-9714868,9714978-9715883,
9715973-9716146,9716260-9716373,9716975-9717033,
9717170-9717236,9717305-9717356,9718070-9718488,
9718786-9718847,9719305-9719374,9719730-9719831,
9719933-9720063,9720492-9720606,9720792-9720827
Length = 806
Score = 34.7 bits (76), Expect = 0.073
Identities = 31/95 (32%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Frame = +1
Query: 415 GGQLLLEKHPNEYEELLQAPGDPKCME----DIRKDLHRQFPYHEMFIREEGLGQQELFS 582
G + L EK+P + E Q K E I KDL R FP H + G+ L
Sbjct: 364 GTEELDEKNPEDQELKDQTNAQKKPPEKWKGQIEKDLPRTFPGHPALDED---GRNALRR 420
Query: 583 VLKAYSVLNPKVGYFKHKPPVAAFLSCTCPAVQAF 687
+L AY+ NP VGY + A P AF
Sbjct: 421 LLTAYARHNPSVGYCQAMNFFAGLFLLFMPEEHAF 455
>05_05_0145 -
22690212-22690472,22690701-22690818,22691125-22691261,
22691743-22691844,22691921-22692001,22692325-22692394,
22692628-22692689,22692908-22693320,22693424-22693507,
22694180-22694272,22694376-22694427,22694542-22694608,
22694714-22694772,22694920-22695033,22695174-22695347,
22695444-22695935,22696021-22696090,22696649-22696692
Length = 830
Score = 32.7 bits (71), Expect = 0.30
Identities = 23/63 (36%), Positives = 28/63 (44%)
Frame = +1
Query: 499 IRKDLHRQFPYHEMFIREEGLGQQELFSVLKAYSVLNPKVGYFKHKPPVAAFLSCTCPAV 678
I KDL R FP H + G+ L +L AY+ NP VGY + A L P
Sbjct: 258 IEKDLPRTFPGHPALDED---GRNALRRLLLAYARHNPAVGYCQAMNFFAGLLLLLMPEE 314
Query: 679 QAF 687
AF
Sbjct: 315 NAF 317
>01_06_1257 -
35778078-35778299,35778952-35779069,35779294-35779433,
35779763-35779864,35779971-35780051,35780333-35780402,
35781053-35781114,35781789-35782183,35782303-35782386,
35782949-35783041,35783144-35783195,35783310-35783376,
35783492-35783550,35784209-35784256,35784927-35785040,
35785162-35785335,35785417-35785944,35786025-35786094,
35786668-35786711
Length = 840
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = +1
Query: 499 IRKDLHRQFPYHEMFIREEGLGQQELFSVLKAYSVLNPKVGYFKHK 636
I KDL R FP H + G+ L +L AY+ NP VGY + K
Sbjct: 270 IEKDLPRTFPGHPALDED---GRNALRRLLTAYARHNPSVGYCQRK 312
>04_01_0256 +
3402982-3402984,3403077-3403158,3403307-3403449,
3403557-3403832,3404136-3404315
Length = 227
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +3
Query: 312 QLGSVYEQELQESTRKMSKRYTSISEAESMVVPVRGTAPARKTSERIRGIAPSAR 476
++ +V QE +ES + Y+ E+ S+ V VRGT K ER++ +A S +
Sbjct: 18 EVKNVLRQEFKESIEY--RNYSKNPESSSLKVEVRGTVDVGKLYERLKKMASSVK 70
>08_02_1480 +
27401923-27402158,27402847-27402982,27403119-27403168,
27403810-27403813,27404394-27404494,27405084-27406305
Length = 582
Score = 29.9 bits (64), Expect = 2.1
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Frame = +1
Query: 220 FGGAQYSPEPKRTVSPSTILKREQKWLRMLDNWEAFMSKNYKKVRERCRK--------GI 375
F A YSP R + S +R++K +W S + K+R+ RK G+
Sbjct: 68 FSPASYSPHSDRGGTKSPWSRRKRKRPLSCRHWNHLFSSD-GKLRDGGRKFLKKVRGGGV 126
Query: 376 PASVRPKAWLYLCGGQLL 429
+R K W +L G +LL
Sbjct: 127 EPEIRAKVWPFLLGVKLL 144
>02_01_0387 - 2804990-2805059,2805106-2806086,2806856-2806875
Length = 356
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 382 SVRPKAWLYLCGGQLLLEKHPNEYEELLQAPGDPKCMEDIRKDLHRQFPYHEMFIR 549
S+RP +W + G ++ +K L A D MEDI + FP++ + +R
Sbjct: 16 SIRPASWKFSMGSGMVKKKVVKAGSFDLDAKLDKSWMEDITCPICLDFPHNAVLLR 71
>02_01_0547 + 4032161-4032418,4032747-4032953,4033216-4033569
Length = 272
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -3
Query: 611 GFSTEYAFRTENNSCCPNPSSLINISWYGNCLCRSFL 501
GF Y T + C + S++ NI W+ C+ SF+
Sbjct: 49 GFKAAYTEMTVRHPCFGHASNMPNIDWWKMCVKDSFI 85
>10_08_1006 - 22194013-22196054,22197357-22198337,22198974-22199301
Length = 1116
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 430 LEKHPNEYEELLQAPGDPKCMEDI 501
+EK+PN YEEL +A +P E+I
Sbjct: 379 VEKNPNNYEELKRAGSNPHNFENI 402
>01_06_1509 -
37855894-37856679,37856766-37856952,37857508-37857580,
37857772-37857816,37858004-37858010
Length = 365
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +1
Query: 244 EPKRTVSPSTILKREQKWLRMLDNWEAFMSKNYKKVRERCRKGIPASVRPKAWLYL 411
E +R VS + R+ K+L ++ E+ + + YK + + G+P VR + L L
Sbjct: 298 ETQRRVSSENVEARKLKYLAEKEHKESTILETYKSLMMQDTTGMPEDVRSERMLAL 353
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = -3
Query: 692 TRNAWTAGHVHERNAATGGLCLKYPTFGFSTEYAF-RTENNSCCPNPSSLINISWYGNCL 516
+RN +T G VHE +C FS Y F +E+ C P+ SS +N+ NCL
Sbjct: 333 SRNVFT-GIVHE------SICELPVLVNFSFAYNFFNSESAPCMPSESSKVNLDDKDNCL 385
>04_03_1049 +
22015053-22015083,22015770-22015885,22016013-22016108,
22016229-22016285,22016468-22016620,22016754-22016838,
22017097-22017187,22017324-22017488,22017813-22017932,
22018020-22018104,22018234-22018402,22019055-22019173,
22019250-22019440,22019746-22019957,22020905-22021500,
22022538-22022658,22023439-22023868,22024412-22024797,
22024976-22025071,22025380-22025432,22026915-22027061,
22027139-22027309,22027880-22027962,22028049-22028247,
22028668-22028789,22029752-22029818,22029960-22030010,
22030768-22031001,22031263-22031451,22032455-22032646,
22032742-22032936
Length = 1673
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 415 GGQLLLEKHPNEYEELLQAPGDPKCMEDIRKDLH 516
GG +L +H E L +P C E + KDLH
Sbjct: 135 GGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLH 168
>02_05_0817 + 31994241-31995908
Length = 555
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 301 EAISVLSSISYSARQFF*VLDCIGHLRKNR 212
+ I +LS Y ARQF + D + H+++ R
Sbjct: 151 DVIDILSGTRYKARQFGVLCDVLDHMKRRR 180
>09_04_0684 -
19442335-19442990,19443774-19443839,19443935-19444032,
19444787-19445157
Length = 396
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 68 HHAQNTPTTPPPPSCGRTN 12
HHAQ PPPP+ G N
Sbjct: 265 HHAQGNVPPPPPPNAGPPN 283
>07_03_0460 + 18425464-18427473
Length = 669
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 413 HRYNHAFGLTDAGIPFRHLSRTF 345
H+YNH F +TD G + LS++F
Sbjct: 39 HKYNHIFCVTDMGDWYDKLSQSF 61
>01_04_0010 - 15058175-15058195,15058320-15058430,15059031-15059246,
15059327-15059505,15059655-15059820,15059914-15059972,
15060065-15060107,15060285-15060354,15060458-15060547,
15060621-15060742,15060777-15060808,15060876-15061064,
15061148-15061241,15061325-15061412,15061498-15061718,
15061924-15061997,15062081-15062363,15062455-15062589,
15062721-15062942,15063029-15063208,15063305-15063402,
15063522-15063634,15064156-15064259,15064400-15064522,
15064857-15065192
Length = 1122
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +3
Query: 285 RTEMASYA*QLGSVYEQELQESTRKMSKRYTSISEAESMVVPV-RGTAPARKTSERIRGI 461
R ++ S A ++ E+E+Q + +RY +S+ + ++ + RG A + E +R I
Sbjct: 914 RNDIRSIAAEMEGKTEEEVQRYAKVFKERYKELSDYDRIIKNIERGEARISRKDEIMRAI 973
Query: 462 APSARR 479
R
Sbjct: 974 GKKLDR 979
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,956,852
Number of Sequences: 37544
Number of extensions: 452987
Number of successful extensions: 1736
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1733
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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