Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0713
(712 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 2e-24
SB_17043| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 6e-14
SB_31094| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_18815| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_10583| Best HMM Match : TBC (HMM E-Value=6.89999e-42) 54 9e-08
SB_26950| Best HMM Match : TBC (HMM E-Value=5.2e-28) 53 3e-07
SB_4828| Best HMM Match : Peptidase_C48 (HMM E-Value=3e-06) 47 2e-05
SB_3397| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_48859| Best HMM Match : TBC (HMM E-Value=7.1e-12) 40 0.003
SB_22474| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_17889| Best HMM Match : Patched (HMM E-Value=0.14) 35 0.057
SB_35776| Best HMM Match : Pkinase (HMM E-Value=0) 31 1.2
SB_50632| Best HMM Match : ShTK (HMM E-Value=0.0091) 30 2.1
SB_32155| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_42991| Best HMM Match : fn3 (HMM E-Value=7.2e-08) 29 4.9
SB_34701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_17172| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_14786| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_11324| Best HMM Match : Retinin_C (HMM E-Value=1.4) 29 4.9
SB_7865| Best HMM Match : Mucin (HMM E-Value=1.2) 28 6.5
SB_25758| Best HMM Match : 7tm_1 (HMM E-Value=1.9e-20) 28 6.5
SB_22046| Best HMM Match : PPV_E1_N (HMM E-Value=0.61) 28 6.5
SB_54428| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_11667| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-14) 28 8.6
SB_23100| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 585
Score = 109 bits (262), Expect = 2e-24
Identities = 59/137 (43%), Positives = 82/137 (59%), Gaps = 3/137 (2%)
Frame = +1
Query: 205 DRHGFFGGAQYSPEPKRTVSPSTILKREQKWLRMLDNWEAFMSKNYKKVRERCRKGIPAS 384
DR+GF G + + E T+ + +RE KWL ML+N+E +++K YKK+RERCRKGIP +
Sbjct: 37 DRYGFVGKHKQASET--TLPVQVLREREIKWLEMLNNYEKWITKKYKKLRERCRKGIPPA 94
Query: 385 VRPKAWLYLCGGQLLLEKHPNEYEELLQAPGDPKCMEDIRKDLHRQFPYHEMFIREEGLG 564
VR AW +L G + +++PN +E+L P P+ I KDL R FPYHE F G G
Sbjct: 95 VRGLAWRHLSGSIKMEKQNPNLFEDLASKP-SPEWENTIEKDLCRVFPYHEQFTDTGGQG 153
Query: 565 ---QQELFSVLKAYSVL 606
E FS+ K V+
Sbjct: 154 YVTSPECFSIRKGIFVV 170
>SB_17043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 556
Score = 74.9 bits (176), Expect = 6e-14
Identities = 38/104 (36%), Positives = 62/104 (59%)
Frame = +1
Query: 292 KWLRMLDNWEAFMSKNYKKVRERCRKGIPASVRPKAWLYLCGGQLLLEKHPNEYEELLQA 471
+W +++ NW+ + K K VR+ RKGIP ++R W LCG + + K +EY +L++A
Sbjct: 18 EWGQLMGNWDDAVRKKPKNVRDMVRKGIPNALRGLVWQLLCGSRDMPLK--DEYPKLIKA 75
Query: 472 PGDPKCMEDIRKDLHRQFPYHEMFIREEGLGQQELFSVLKAYSV 603
+ C I++D+ R FP H F ++G+GQ LF+V+K V
Sbjct: 76 --NSACERMIKRDIARTFPDHSFFKDKDGIGQGTLFNVIKVTCV 117
>SB_31094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1183
Score = 70.1 bits (164), Expect = 2e-12
Identities = 47/153 (30%), Positives = 67/153 (43%), Gaps = 2/153 (1%)
Frame = +1
Query: 235 YSPEPKRTVSPSTILKREQKWLRMLDNWEAFMSKNYKKVRERCRKGIPASVRPKAWLYLC 414
+S P ++ +K L + + K E KGIP ++R + WL
Sbjct: 375 FSSTPTDQITAKETVKEHLWRLHLAEYGRGVCMYRTVKTHELILKGIPDNLRAEIWLIFS 434
Query: 415 GGQLLLEKHPNEYEELL-QAPGDPK-CMEDIRKDLHRQFPYHEMFIREEGLGQQELFSVL 588
G +E HP Y L+ Q G ++I +DLHR P H F + G+G L VL
Sbjct: 435 GAINEIETHPGYYVSLVEQCEGKSSLAFDEIERDLHRSLPEHPAFQSDVGIG--ALRRVL 492
Query: 589 KAYSVLNPKVGYFKHKPPVAAFLSCTCPAVQAF 687
AY+ NP +GY + VA+ L C QAF
Sbjct: 493 TAYAWRNPSIGYCQAMNIVASVLLLYCTEEQAF 525
>SB_18815| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 62.9 bits (146), Expect = 2e-10
Identities = 41/133 (30%), Positives = 65/133 (48%)
Frame = +1
Query: 295 WLRMLDNWEAFMSKNYKKVRERCRKGIPASVRPKAWLYLCGGQLLLEKHPNEYEELLQAP 474
W +L W+ +S +++ + RKGIP +R + W + G ++ + Y+ L
Sbjct: 386 WSELLSKWKD-VSTRPRQLVQLVRKGIPEPLRGQVW-QMMAGLSENDELVDSYKHLFTKE 443
Query: 475 GDPKCMEDIRKDLHRQFPYHEMFIREEGLGQQELFSVLKAYSVLNPKVGYFKHKPPVAAF 654
+ + I D+HR FP H+ F G GQ+ L+ + KAYSV + +VGY + A
Sbjct: 444 SPTE--QVIVWDIHRTFPAHDYFKDSGGEGQEALYKISKAYSVYDEEVGYCQGLSFFIAV 501
Query: 655 LSCTCPAVQAFLV 693
L P QAF V
Sbjct: 502 LLLHMPEEQAFAV 514
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 62.9 bits (146), Expect = 2e-10
Identities = 41/133 (30%), Positives = 65/133 (48%)
Frame = +1
Query: 295 WLRMLDNWEAFMSKNYKKVRERCRKGIPASVRPKAWLYLCGGQLLLEKHPNEYEELLQAP 474
W +L W+ +S +++ + RKGIP +R + W + G ++ + Y+ L
Sbjct: 40 WSELLSKWKD-VSTRPRQLVQLVRKGIPEPLRGQVW-QMMAGLSENDELVDSYKHLFTKE 97
Query: 475 GDPKCMEDIRKDLHRQFPYHEMFIREEGLGQQELFSVLKAYSVLNPKVGYFKHKPPVAAF 654
+ + I D+HR FP H+ F G GQ+ L+ + KAYSV + +VGY + A
Sbjct: 98 SPTE--QVIVWDIHRTFPAHDYFKDSGGEGQEALYKISKAYSVYDEEVGYCQGLSFFIAV 155
Query: 655 LSCTCPAVQAFLV 693
L P QAF V
Sbjct: 156 LLLHMPEEQAFAV 168
>SB_10583| Best HMM Match : TBC (HMM E-Value=6.89999e-42)
Length = 297
Score = 54.4 bits (125), Expect = 9e-08
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Frame = +1
Query: 334 KNYKKVRERCRKGIPASVRPKAWLYLCGGQLLLEKHPNEYEELLQA-------------- 471
K +K++ RKG+P+S R + W+ + G + ++K P Y+ LL++
Sbjct: 67 KKSRKIKRFVRKGVPSSHRAQVWMDISGARKRMKKLPGYYQSLLESELDDIVRNSILTVV 126
Query: 472 PGDPKCMEDIRKDLHRQFPYHEMFIREEGLGQQELFSVLKAYSVLNPKVGYFKHKPPVAA 651
P M + D+ R FP + F +Q+L ++L AY+V NPK+GY + +A
Sbjct: 127 PAADTFMFVVFTDIDRTFPENIYFGSSSDSLKQKLKNILVAYAVHNPKIGYCQGLNYIAG 186
Query: 652 FL 657
L
Sbjct: 187 LL 188
>SB_26950| Best HMM Match : TBC (HMM E-Value=5.2e-28)
Length = 998
Score = 52.8 bits (121), Expect = 3e-07
Identities = 44/144 (30%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Frame = +1
Query: 292 KWLRMLDN-WEAFMSKNYKKVRERCRKGIPASVRPKAWLYLCGGQLLLEKHPNE------ 450
KW ++L W+ + +R+ + G+P R + W +L + +
Sbjct: 553 KWDQLLSRPWDVQVEMCV--LRDAVKAGVPKDKRGEIWEFLAKQYSVRSPASKDAFWKAG 610
Query: 451 -YEELLQAPGDPKCMEDIRKDLHRQFPYHEMFIREEGLGQQELFSVLKAYSVLNPKVGYF 627
YEE+ G I DL R FP H F + G GQ LF++LKAYSVL+ VGY
Sbjct: 611 SYEEMRD--GSCNHQHSIFIDLGRTFPRHPYFTSQFGPGQLSLFNLLKAYSVLDTDVGYC 668
Query: 628 KHKPPVAAFLSCTCPAVQAFLVSR 699
+ VA L +AF V R
Sbjct: 669 QGLSFVAGILLMHMEEAKAFDVMR 692
>SB_4828| Best HMM Match : Peptidase_C48 (HMM E-Value=3e-06)
Length = 512
Score = 46.8 bits (106), Expect = 2e-05
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Frame = +1
Query: 283 REQKWLRMLDNWEAFMSKNYKKVRERCRKGIPASVRPKAWLYLCGGQLLLEKHPNE---Y 453
R KWL+M+ NW+ ++ +K+R+R KGIP S+R + W L G ++K PN Y
Sbjct: 423 RISKWLKMIKNWDKYVRS--EKLRKRVYKGIPNSMRGEIWKKLLG----VDKIPNRTTTY 476
Query: 454 EELLQ-APGDPKCMEDIRKDLHRQFPYHEMFIREE 555
E + + A + I D++R + H MF RE+
Sbjct: 477 ETMKRIARLQSPDLRQIDLDVNRTYRDHIMF-RED 510
>SB_3397| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 317
Score = 42.3 bits (95), Expect = 4e-04
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Frame = +1
Query: 346 KVRERCRKGIPASVRPKAWLYLCGGQLLLEKHPNEYEELLQAPGDPK--CMEDIRKDLHR 519
K+RE GIP S+R W+ + G Y+++++A D + I KDL R
Sbjct: 217 KLRELVCSGIPHSMRAPIWMRISGALQKKINAEFTYKQVVRASSDENSPASKQIEKDLLR 276
Query: 520 QFPYHEMFIREEGLGQQELFSVLKAYSVLNPKVGY 624
P + F G + +L++ + L P +GY
Sbjct: 277 TMPNNACFSTPTSTGLLRMRRILRSLAWLYPDIGY 311
>SB_48859| Best HMM Match : TBC (HMM E-Value=7.1e-12)
Length = 660
Score = 39.5 bits (88), Expect = 0.003
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 3/132 (2%)
Frame = +1
Query: 304 MLDNWEAFMSKNYKKVRERCRKGIPASVRPKAWLYLCGGQLLLEKHPNEYEELLQAPGDP 483
+L NWE+ K+ +K +E +G+P SVR K W G L + E ++ Q+
Sbjct: 381 ILPNWESM--KHSRKAKELWWQGLPPSVRGKIWKLAIGNDLQITY---ELLDIFQSHAYE 435
Query: 484 KCMEDIRKDLHRQFPYHEMFIREEGLG---QQELFSVLKAYSVLNPKVGYFKHKPPVAAF 654
K M R + + +E G G L S+L AY+ P VGY + +AA
Sbjct: 436 KLMVT-RNNRKKN--------KESGSGGPFHDVLHSILGAYTCYRPDVGYVQGMSFIAAV 486
Query: 655 LSCTCPAVQAFL 690
L AF+
Sbjct: 487 LLLNLEPPDAFI 498
>SB_22474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 39.1 bits (87), Expect = 0.003
Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 23/180 (12%)
Frame = +1
Query: 154 SEQADTTSICSSVTTQPDRHGFFGGAQYSPEPKRTVSPSTILKREQKWLRM------LDN 315
SE ADT ++ +V DR GF + + E + +S + L R ++ + N
Sbjct: 258 SESADTATLSRTVIAPHDRWGFVQRLESNDE-EAFLSMAHQLDRRSGEIKTNSESQDISN 316
Query: 316 ---WEAFM----SKNYKKVRE---RCRKGIPASVRPKAWLYLCGGQLLLEKH---PNEYE 456
WE +M +++++K E R GIP R + W + K PN Y
Sbjct: 317 GVKWENYMMAHKNRDFQKTMELKSMVRGGIPNEYRSQIWRQCINHFVRGTKSMAGPNYYA 376
Query: 457 ELLQAPGD----PKCMEDIRKDLHRQFPYHEMFIREEGLGQQELFSVLKAYSVLNPKVGY 624
LL + + I DL R P + + + + G L +VL AYS NP+VGY
Sbjct: 377 HLLDSIASNIKFSPATKQIELDLLRTLPNNVHYNKPDANGIGMLRNVLMAYSWHNPEVGY 436
>SB_17889| Best HMM Match : Patched (HMM E-Value=0.14)
Length = 925
Score = 35.1 bits (77), Expect = 0.057
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +1
Query: 298 LRMLDNWEAFMSKNYKKVRERCRKGIPAS-VRPKAWLYL 411
L + D+WEAFM + KK+ CR G A+ AW +L
Sbjct: 776 LEVYDHWEAFMQEKMKKMPPSCRNGFQATPTAHNAWHWL 814
>SB_35776| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 558
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +1
Query: 451 YEELLQAPGDPKCMEDIRKDLHRQFPYHEMFIREEGLGQQELFSVLKAYSVLNPK 615
++ L+ P +PK ED ++ +H E I EGLG + F+ ++ + N K
Sbjct: 301 FKSSLRFPSEPKISEDAKELIHNLLTSSEGRIGYEGLGCHKFFNGIEWNKLQNSK 355
>SB_50632| Best HMM Match : ShTK (HMM E-Value=0.0091)
Length = 566
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/65 (29%), Positives = 26/65 (40%)
Frame = +1
Query: 253 RTVSPSTILKREQKWLRMLDNWEAFMSKNYKKVRERCRKGIPASVRPKAWLYLCGGQLLL 432
R V T++ R + R+ + + Y V CRKGI R + L LC
Sbjct: 279 RLVRRITVMSRTRVLRRITVMSRTRVVRGYGNVTHTCRKGIMVMSRTLSGLRLCHAHCRK 338
Query: 433 EKHPN 447
E H N
Sbjct: 339 EDHSN 343
>SB_32155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +3
Query: 312 QLGSVYEQELQESTRKMSKRYTSISEAESMVVPVRGTAPARKTSE 446
+L EQ ++ + +M ++T + + S+ +PV+ +P TSE
Sbjct: 45 ELPKAEEQYIKPAGPRMLGKFTFVKKRHSLEIPVKAISPRTSTSE 89
>SB_42991| Best HMM Match : fn3 (HMM E-Value=7.2e-08)
Length = 769
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -3
Query: 353 RTFL*FLLINASQLSSIRSHFCSLFNIVLGETVLLGSGLYWAPPKKPCLSG 201
+T + IN S I H S + V+G + G ++ P K PC G
Sbjct: 450 KTLSFYRCINVSTCIGINVHLFSRYRKVIGNKCVGGDSNFFLPKKTPCPVG 500
>SB_34701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Frame = +1
Query: 271 TILKREQKWLRMLDNWE--AFMSKNYKK----VRERCRKGIPASVRPKAWLYL 411
+++ ++ K + L+NW ++ +YKK + +R +K +PA +RP Y+
Sbjct: 11 SLISKKDKNKKKLENWRPVTLLNTDYKKTTAAIAQRIKKVLPAIIRPNQTDYI 63
>SB_17172| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 390 PH*CWYTFSTSFSYFLVVLAHKRFPVVKHTKPFLFSLQYR 271
PH W F S + + + FP +KH KP +F L ++
Sbjct: 223 PH--WIVFDCSLTQWPDNTDTRMFPSIKHPKPLIFRLPFQ 260
>SB_14786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 87
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Frame = +1
Query: 271 TILKREQKWLRMLDNWE--AFMSKNYKK----VRERCRKGIPASVRPKAWLYL 411
+++ ++ K + L+NW ++ +YKK + +R +K +PA +RP Y+
Sbjct: 11 SLISKKDKNKKKLENWRPVTLLNTDYKKTTAAIAQRIKKVLPAIIRPNQTDYI 63
>SB_11324| Best HMM Match : Retinin_C (HMM E-Value=1.4)
Length = 770
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 369 FSTSFSYFLVVLAHKRFPVVKHTKPFLFSLQY-RTRRDSSFRFWTV 235
+S+ FL+ LA + V K PF + L Y R RR F +W +
Sbjct: 429 YSSKVFLFLIFLAFAAYFVAKFKMPFGWRLIYRRQRRIRRFAYWAL 474
>SB_7865| Best HMM Match : Mucin (HMM E-Value=1.2)
Length = 2527
Score = 28.3 bits (60), Expect = 6.5
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +1
Query: 187 SVTTQPDRHGFFGGAQYSPEPKRTVSPSTILKREQKWLRMLD--NWEAFM--SKNYKKVR 354
S T ++H +Q P+P+RT + T +K+ +K R L+ + EAF+ K+ K VR
Sbjct: 2266 SYVTGEEKHKAETLSQQKPKPRRTGTRLTTMKKTKKESRDLEALSKEAFLWIPKHIKVVR 2325
Query: 355 ERCR 366
+ R
Sbjct: 2326 DLVR 2329
>SB_25758| Best HMM Match : 7tm_1 (HMM E-Value=1.9e-20)
Length = 437
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 571 ELFSVLKAYSVLNPKVGYFKHKPPVAAFLSCTCPAVQAFLVSRQHQR 711
E+F +L+ + +L G+++ +A F SC PA+ + +S Q R
Sbjct: 272 EVFFILRQFDILVLPHGFYQFTDVLAMFNSCVNPAI--YCLSNQEYR 316
>SB_22046| Best HMM Match : PPV_E1_N (HMM E-Value=0.61)
Length = 362
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +2
Query: 146 SIVASRRIPHQYVHR*LPNRTDTVFSEVPNTVQNLKELSRRVRY*R--ENRNGFVC 307
SI+ P++ + R PN DT+ + +P T ++LK ++R +++ ++ G VC
Sbjct: 121 SIILRSTSPYELIDR--PNMKDTIEALLPYTERHLKRINRLLQWREFSDDTFGIVC 174
>SB_54428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 447
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +1
Query: 229 AQYSPEPKRTVSPSTILKREQK-WLRMLDNWEAFMSKNYKKVRER 360
A + P PK +SP ++L+ +Q WL+ ++ KN K E+
Sbjct: 346 AIHRPRPKSNLSPPSVLEFDQSPWLKQYIDFNTEKRKNTKNSCEK 390
>SB_11667| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-14)
Length = 348
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 387 H*CWYTFSTSFSYFLVVLAHKRFPVVKHTKPFLFSLQYRTRR 262
H C Y FS S Y L+++ + RF + T+P+ + RR
Sbjct: 117 HFCVYVFSGSSLYHLLIVTYDRFVAI--TRPYEYPQLVTKRR 156
>SB_23100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +1
Query: 442 PNEYEELLQAPGDPKCMEDIRKDLHRQ 522
P+ ++ +LQ+P D KC+++I K + R+
Sbjct: 64 PHTHQGVLQSPQDRKCLQNIVKQVLRE 90
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,588,052
Number of Sequences: 59808
Number of extensions: 497680
Number of successful extensions: 1808
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1799
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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