Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0711
(708 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 23 2.4
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 23 3.2
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 22 4.3
AM292356-1|CAL23168.2| 251|Tribolium castaneum gustatory recept... 22 4.3
AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 21 7.4
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 21 7.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 9.8
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 9.8
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 9.8
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 9.8
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 28 YFFIKD*IFIVYLDFMPRIYYSLCQLI 108
YF+ IF V+L F+ IY+ C I
Sbjct: 148 YFYCAFIIFTVHLLFLLCIYHFFCAFI 174
Score = 22.2 bits (45), Expect = 4.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 49 IFIVYLDFMPRIYYSLCQLI 108
IF ++L F+ IYY C LI
Sbjct: 274 IFTMHLLFLLCIYYFYCALI 293
Score = 21.4 bits (43), Expect = 7.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 28 YFFIKD*IFIVYLDFMPRIYYSLCQL 105
YF+ IF V+L F+ IYY + L
Sbjct: 115 YFYYAFIIFTVHLLFLLCIYYFVVPL 140
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 22.6 bits (46), Expect = 3.2
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 466 MLGLECVYKTKYFLTI*QISY 528
M G+EC K +FL I ++S+
Sbjct: 503 MCGVECSDKVSFFLHIARVSH 523
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 22.2 bits (45), Expect = 4.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 6 FKSLI*RLFFYQRLDLY 56
F L RLF+YQ DLY
Sbjct: 271 FGCLSTRLFYYQLTDLY 287
>AM292356-1|CAL23168.2| 251|Tribolium castaneum gustatory receptor
candidate 35 protein.
Length = 251
Score = 22.2 bits (45), Expect = 4.3
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 273 SNNVKYSKKQATYFSKAISNVF 208
+ N+ YSK+ T K SN+F
Sbjct: 82 AKNLLYSKQIVTILKKTKSNIF 103
>AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain
transcription factor Maxillopediaprotein.
Length = 523
Score = 21.4 bits (43), Expect = 7.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 185 RLLRVKFSNTLLIALEK 235
R LR ++NT L+ LEK
Sbjct: 5 RRLRTAYTNTQLLELEK 21
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 21.4 bits (43), Expect = 7.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 185 RLLRVKFSNTLLIALEK 235
R LR ++NT L+ LEK
Sbjct: 136 RRLRTAYTNTQLLELEK 152
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 659 LRPHQLIQFCHRTVMETKLNNNKLPS 582
L+P ++ FC+R + K KLPS
Sbjct: 100 LKPDKVTVFCNRDLGREKQFIVKLPS 125
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 659 LRPHQLIQFCHRTVMETKLNNNKLPS 582
L+P ++ FC+R + K KLPS
Sbjct: 100 LKPDKVTVFCNRDLGREKQFIVKLPS 125
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 659 LRPHQLIQFCHRTVMETKLNNNKLPS 582
L+P ++ FC+R + K KLPS
Sbjct: 100 LKPDKVTVFCNRDLGREKQFIVKLPS 125
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 659 LRPHQLIQFCHRTVMETKLNNNKLPS 582
L+P ++ FC+R + K KLPS
Sbjct: 100 LKPDKVTVFCNRDLGREKQFIVKLPS 125
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,535
Number of Sequences: 336
Number of extensions: 3674
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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