Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0711
         (708 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   3.7  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   3.7  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   5.0  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              22   6.6  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    22   6.6  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    21   8.7  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    21   8.7  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    21   8.7  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    21   8.7  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 70  FMPRIYYSLCQLIPDNAYS 126
           FMPR+Y  L  ++PD  ++
Sbjct: 228 FMPRLYDLLGYVMPDRTFA 246


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 571 NILFVNELRALSQTYMKFVK*SKNI 497
           N +F+N L+ L Q Y+K  K  K I
Sbjct: 337 NTMFINILKFLKQKYVKNSKLEKVI 361


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +3

Query: 6   FKSLI*RLFFYQRLDLY 56
           F  L  RLF+YQ  DLY
Sbjct: 275 FGCLSTRLFYYQLTDLY 291


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 218 LIALEK*VACFFEYLTL 268
           LI + K + CFF+Y T+
Sbjct: 113 LIKISKILECFFKYKTI 129


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 646 N*FNFVTGQLWKLN*ITTNYRVLYLNILFVNEL 548
           N +N+      KL     NYR LY NI ++ ++
Sbjct: 87  NNYNYNNNNYKKL--YCNNYRKLYYNINYIEQI 117


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 276 HSNNVKYSKKQATYFSKAISNV 211
           H+NN KY+     Y  K   N+
Sbjct: 91  HNNNYKYNYNNNNYNKKLYYNI 112


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 276 HSNNVKYSKKQATYFSKAISNV 211
           H+NN KY+     Y  K   N+
Sbjct: 91  HNNNYKYNYNNNNYNKKLYYNI 112


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 276 HSNNVKYSKKQATYFSKAISNV 211
           H+NN KY+     Y  K   N+
Sbjct: 91  HNNNYKYNYNNNNYNKKLYYNI 112


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -1

Query: 276 HSNNVKYSKKQATYFSKAISNV 211
           H+NN KY+     Y  K   N+
Sbjct: 91  HNNNYKYNYNNNNYNKKLYYNI 112


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,689
Number of Sequences: 438
Number of extensions: 3914
Number of successful extensions: 28
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)