Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0710
         (397 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O96204 Cluster: Putative uncharacterized protein PFB055...    31   6.1  
UniRef50_UPI0000660F2B Cluster: UPI0000660F2B related cluster; n...    31   8.1  

>UniRef50_O96204 Cluster: Putative uncharacterized protein PFB0555c;
            n=4; Plasmodium|Rep: Putative uncharacterized protein
            PFB0555c - Plasmodium falciparum (isolate 3D7)
          Length = 4091

 Score = 31.5 bits (68), Expect = 6.1
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = -2

Query: 387  KKKKNIYITSTLH*RYFKTLTKKKKNTSFV 298
            +KKK IYI ++L  + FK + KKK N+ F+
Sbjct: 1324 EKKKKIYICTSLLLKIFKRIIKKKSNSYFL 1353


>UniRef50_UPI0000660F2B Cluster: UPI0000660F2B related cluster; n=1;
           Takifugu rubripes|Rep: UPI0000660F2B UniRef100 entry -
           Takifugu rubripes
          Length = 397

 Score = 31.1 bits (67), Expect = 8.1
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 90  PLRESHGNLSSINFRYGRPGHHNMSQNR 7
           PL + H + S  N  + +PGHHN  + R
Sbjct: 174 PLYQQHDDTSEFNNNFQQPGHHNRKRKR 201


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 325,344,241
Number of Sequences: 1657284
Number of extensions: 5369636
Number of successful extensions: 8318
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 8137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8317
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)