Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0709
(642 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 260 5e-70
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 3e-17
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 83 1e-16
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 72 5e-13
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 70 1e-12
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 39 0.003
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.037
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 35 0.049
SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.049
SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.065
SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14) 34 0.085
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0) 32 0.34
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 31 0.80
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_52977| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 30 1.8
SB_30566| Best HMM Match : zf-C4_Topoisom (HMM E-Value=0.38) 29 2.4
SB_53343| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_36974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 29 4.2
SB_33833| Best HMM Match : DUF947 (HMM E-Value=0.2) 29 4.2
SB_11401| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_41890| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64) 28 5.6
SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037) 28 5.6
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 28 5.6
SB_46136| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_56573| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_41319| Best HMM Match : NACHT (HMM E-Value=5.2e-14) 28 7.4
SB_32475| Best HMM Match : IWS1_C (HMM E-Value=0) 28 7.4
SB_29265| Best HMM Match : OmpH (HMM E-Value=3) 28 7.4
SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) 28 7.4
SB_45970| Best HMM Match : rve (HMM E-Value=1.7e-11) 28 7.4
SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064) 27 9.8
SB_27802| Best HMM Match : Filament (HMM E-Value=0.2) 27 9.8
SB_45719| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_18003| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_7056| Best HMM Match : Seryl_tRNA_N (HMM E-Value=8.1) 27 9.8
SB_4536| Best HMM Match : Krr1 (HMM E-Value=4) 27 9.8
>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 260 bits (638), Expect = 5e-70
Identities = 140/182 (76%), Positives = 148/182 (81%), Gaps = 1/182 (0%)
Frame = +3
Query: 3 DKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENT 182
DK+IW DGEE + EEVLRM TDEIVSR RLLDNEI KEN+
Sbjct: 7 DKAIWGDGEE-MGEEVLRMSTDEIVSRARLLDNEI---------------------KENS 44
Query: 183 EKIKVNKTLPYLVSNVIELLDVDPQE-EEEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPV 359
EKIKVNKTLPYLVSNVIELLDVDPQ+ EEDGA VDLDSQRKGKCAVIKTSTRQTYFLPV
Sbjct: 45 EKIKVNKTLPYLVSNVIELLDVDPQDYAEEDGANVDLDSQRKGKCAVIKTSTRQTYFLPV 104
Query: 360 IGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGXLDKQIQ 539
IGLV+ E L PGDLVGVNKDSYLILE LPAEYD+RVKAMEVDERPTEQYSDIG LD+QIQ
Sbjct: 105 IGLVEPENLTPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGLDQQIQ 164
Query: 540 EL 545
E+
Sbjct: 165 EM 166
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 85.4 bits (202), Expect = 3e-17
Identities = 52/175 (29%), Positives = 91/175 (52%)
Frame = +3
Query: 111 IMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDL 290
+M+ E ++ L+ Q +K +E K+ + P V N+ E++D
Sbjct: 268 LMEEEFIQNQERLKPQEEKHEEERSKVDDLRGTPMSVGNLEEIID--------------- 312
Query: 291 DSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVK 470
D+ A++ TS +++ ++ VD + L+PG V +N + ++ L + D V
Sbjct: 313 DNH-----AIVSTSVGSEHYVSILSFVDKDLLEPGCTVLLNHKVHAVVGVLSDDADPMVT 367
Query: 471 AMEVDERPTEQYSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFG 635
M++++ P E Y+DIG LD QIQE+ E+V LP+TH E + +G+ P PK L+G
Sbjct: 368 VMKLEKAPQESYADIGGLDTQIQEIKESVELPLTHPELYEEMGIKP-PKGVILYG 421
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 83.4 bits (197), Expect = 1e-16
Identities = 37/107 (34%), Positives = 66/107 (61%)
Frame = +3
Query: 318 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPT 497
++ ++T Y++ ++ +D E LKP V ++K S +++ LP E D+ + + +E+P
Sbjct: 101 IVASTTGSNYYVRILSTIDKELLKPSASVALHKHSNALVDILPPEADSSIAMLTNEEKPN 160
Query: 498 EQYSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFGP 638
Y++IG +D Q QE+ EAV LP+TH E + +G+ P P+ L+GP
Sbjct: 161 VSYAEIGGMDIQKQEIREAVELPLTHFELYKQIGIDP-PRGVLLYGP 206
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 71.7 bits (168), Expect = 5e-13
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = +3
Query: 408 VNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGXLDKQIQELIEAVVLPMTHKEKF 587
V+++ Y I LP + D V M+V+E+P YSDIG +QI +L E V P+ H E+F
Sbjct: 51 VDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIDKLREVVETPLLHPERF 110
Query: 588 VNLGLPPTPKEFFLFGP 638
VNLG+ P PK LFGP
Sbjct: 111 VNLGIEP-PKGVLLFGP 126
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 70.1 bits (164), Expect = 1e-12
Identities = 39/107 (36%), Positives = 57/107 (53%)
Frame = +3
Query: 318 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPT 497
++K + Y + VD KLK G V ++ + I+ LP E D V M ++
Sbjct: 72 IVKATNGPRYVVGCRRQVDKAKLKQGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGN 131
Query: 498 EQYSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFGP 638
YSD+G L +QI+EL E + LP+T+ E F +G+ P PK LFGP
Sbjct: 132 ISYSDVGGLSEQIRELREVIELPLTNPELFQRVGIAP-PKGCLLFGP 177
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 56.4 bits (130), Expect = 2e-08
Identities = 41/125 (32%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Frame = +3
Query: 288 LDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGD----LVGVNKDSYLILETLP--- 446
L++QR A ++ + L G E +KP D LV V+ + +++
Sbjct: 96 LEAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKGID 155
Query: 447 -AEYDARVKAMEVDERPTEQYSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEF 623
AE D V M V++ P Y +G LDKQI+E+ E + LP+ H E F LG+ PK
Sbjct: 156 MAEVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGI-DQPKGV 214
Query: 624 FLFGP 638
L+GP
Sbjct: 215 LLYGP 219
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +3
Query: 504 YSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFGPS 641
+ IG L QIQ + E + +P+T+ E F G+PP P+ L+GPS
Sbjct: 255 FQSIGGLKTQIQAVREMIEMPLTNPELFTAYGVPP-PRGILLYGPS 299
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +3
Query: 486 ERPTEQYSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFGP 638
E P +SD+G + ++L EAV P+ H E F LG+ P P+ ++GP
Sbjct: 530 EVPKVHWSDVGGNEMIKRKLKEAVEWPLKHPEAFQRLGIRP-PRGILMYGP 579
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/90 (31%), Positives = 43/90 (47%)
Frame = +3
Query: 369 VDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGXLDKQIQELI 548
+DAE L D + V+ D + + R +EV P + DIG L+ +EL
Sbjct: 270 IDAEVL---DSLAVSMDDFRYAMGVSNPSALRETVVEV---PNVSWDDIGGLEGVKRELQ 323
Query: 549 EAVVLPMTHKEKFVNLGLPPTPKEFFLFGP 638
E V P+ H +KF+ G+ P+ K +GP
Sbjct: 324 ELVQYPVEHPDKFLKFGMTPS-KGVLFYGP 352
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 35.5 bits (78), Expect = 0.037
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 468 KAME--VDERPTEQYSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFGP 638
K ME V +PT ++ D+G L+ Q L +A+ P+ H E F +GL P+ L+GP
Sbjct: 470 KGMEGVVRLQPT-RWDDVGGLEGVKQALRQAIEWPLLHPEAFARMGL-RRPRGVLLYGP 526
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 35.1 bits (77), Expect = 0.049
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 489 RPTEQYSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFGP 638
+PT ++ D+G L+ Q L +A+ P+ H E F +GL P+ L+GP
Sbjct: 8 QPT-RWDDVGGLEGVKQALRQAIEWPLLHPEAFARMGL-RRPRGVLLYGP 55
>SB_31650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3212
Score = 35.1 bits (77), Expect = 0.049
Identities = 27/112 (24%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Frame = +3
Query: 9 SIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKI--MKSEVMRISHELQAQNDKIKENT 182
S W+D +L EV ++ D+ + +++D+E ++ ++S + + L D +K +
Sbjct: 2603 SDWKDQASSLQSEVAQLKKDKAAAMHKVIDSEEQMIQLRSRLYKTEDSLVRNQDTVKLLS 2662
Query: 183 EKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTR 338
K N L + + L V E ++ +VD + + K KC V+ T T+
Sbjct: 2663 ---KENTDLRVEIERLRSRLSVYASETAKE--IVDGNGEGKAKCGVV-TKTK 2708
>SB_20161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 34.7 bits (76), Expect = 0.065
Identities = 20/84 (23%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +3
Query: 66 DEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNK-TLPYLVSNVIELL 242
+ + S R +NEI +K+ + R+ EL++ +++ ++EKI ++ + L ++ +
Sbjct: 105 ESVTSELRGRENEIAELKTSIGRLESELRSLKSELQNSSEKISEDEHEISQLKNDKARCM 164
Query: 243 -DVDPQEEEEDGAVVDLDSQRKGK 311
++ + E+ + VVDL RK +
Sbjct: 165 QELRDEREKSNKLVVDLQKTRKAQ 188
>SB_23205| Best HMM Match : Helicase_C (HMM E-Value=3.9e-14)
Length = 1197
Score = 34.3 bits (75), Expect = 0.085
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Frame = +3
Query: 3 DKSIWEDGEEALSEEVLRMPT--DEIVSRTRLLDNEIKIMKSE--VMRISHELQAQNDKI 170
D+ WE+ ++ L M T DE + + E K E + + ++ AQ +I
Sbjct: 391 DREEWEEEQKRLDRAWYDMDTGYDETQNPFADVSEEYTKKKEEKLIKKAVKKMSAQQRQI 450
Query: 171 KENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDL 290
++ + + N+ L S V++ LDVD EEE+ A V L
Sbjct: 451 NKDNDMWETNRML---TSGVVQKLDVDEDFEEENEAKVHL 487
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 402 VGVN-KDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGXLDKQIQELIEAVVLPMTHK 578
V +N KD L+ L A + + A ++ P + D+G LD +E+++ + LP+ H
Sbjct: 779 VSINFKDFQEALDALQASHADAIGAPKI---PDISWKDVGGLDSVKEEILDTIQLPLLHP 835
Query: 579 EKF 587
E F
Sbjct: 836 ELF 838
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 33.1 bits (72), Expect = 0.20
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 123 EVMRISHELQAQNDKIKENTEKIK-VNKTLPYLVSNVIELLD 245
E+ + +EL+ Q + IKEN EK+K K + L +IEL D
Sbjct: 612 EITELENELEEQREIIKENEEKLKEKEKEIEKLKKKIIELSD 653
>SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 590
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +3
Query: 93 LDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVI---ELLDVDPQ 257
++NE K+ ++ V ++H+L + D E E I++ PY + +V+ EL+ V P+
Sbjct: 191 VENEEKVYEALVRWVNHDLSQRRDLFPELLELIRLPLVSPYYLVDVVEKEELMTVSPR 248
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 31.1 bits (67), Expect = 0.80
Identities = 25/105 (23%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Frame = +3
Query: 3 DKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENT 182
++ + E+ E EE +++ + + E+++M + + HE + +++IKE
Sbjct: 2911 EEELLEEVEVQRVEEGASHDLEDVPALKESYEEEVEVM---AVGLKHEERVNDEEIKEKD 2967
Query: 183 EKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDL--DSQRKGK 311
EKI +++ N+I+ L+ +EE E AV + +R+GK
Sbjct: 2968 EKIHLDE------ENIIQDLEETFEEELEVSAVETSKNEDERRGK 3006
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +3
Query: 18 EDGEEALSEEVL--RMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKI 191
EDG E L E++ R E+ R + L+ E +++ +V + ++ + KIK+ EK+
Sbjct: 408 EDGTE-LEEKIRSQRNRITELERRVKELEKEKNLLEQQVKTMKNKSDDDDKKIKDLNEKV 466
Query: 192 KVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRK 305
+V + L N E+ + E + + DL + K
Sbjct: 467 RVLE--KQLKENDAEIQGLKDDNERLEDELEDLSTTIK 502
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +3
Query: 66 DEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLD 245
DE++ + L ++ ++ EV ++ EL+ + ++TEK+ N + ++EL
Sbjct: 716 DELMKQNESLRKKVSKLEDEVRFLNDELREADSSSIKDTEKL--NAEIREFKKKIVELEK 773
Query: 246 -VDPQEEE 266
VD QEEE
Sbjct: 774 LVDDQEEE 781
>SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1531
Score = 30.7 bits (66), Expect = 1.1
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
Frame = +3
Query: 42 EEVLRMPTDEIVSR---TRLLDNEIKIMKSEVMRISHELQAQND------KIKENTEKIK 194
EE LR +E+ R LDNE+ ++++ +L+ D ++ E E+ K
Sbjct: 909 EEKLRRTEEELKDRDGQVAKLDNELTKLQNDFQDTITQLKTLEDLLDTSKRVVEEKEQ-K 967
Query: 195 VNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQ 341
V + L +V EL D +E+DG + +LD K IK Q
Sbjct: 968 VTELDKLLNESVDELQQKDKSLKEKDGKLAELDQALKESRKEIKNREAQ 1016
>SB_52977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 30.7 bits (66), Expect = 1.1
Identities = 30/136 (22%), Positives = 62/136 (45%), Gaps = 1/136 (0%)
Frame = +3
Query: 138 SHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVV-DLDSQRKGKC 314
S + + K +E++E + + + ++ E + + +EEEED ++ D D K
Sbjct: 363 SEDEEKPEHKPREDSEDVTSRTSSDFTLATESEEEEEEEEEEEEDDELIGDPDVLEALKT 422
Query: 315 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 494
A R+ L ++ DA+ + D + +D ++ ++P Y+ K + ++ P
Sbjct: 423 A----KARENEDLLLLA-ADADGNEESDYT-ITEDEGSVVSSIPTFYEGEQKLEDDEDEP 476
Query: 495 TEQYSDIGXLDKQIQE 542
T + S LD+Q E
Sbjct: 477 TSRTST--ALDEQPSE 490
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 165 KIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQR 302
K+K ++ + NKT + N +E D +P+E EED V D++R
Sbjct: 510 KLKSKMKRSEKNKTEELVAVNKVETDDDNPEETEEDSGNVS-DTER 554
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 480 VDERPTEQYSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLP 605
V E+P ++SDI L+ + L EAV+LP+ F P
Sbjct: 88 VMEKPNVKWSDIAGLESAKEALKEAVILPIKFPHLFTGKRTP 129
>SB_30566| Best HMM Match : zf-C4_Topoisom (HMM E-Value=0.38)
Length = 597
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Frame = +3
Query: 450 EYDARVKAMEVDERPTEQYSDIGXL---DKQ-IQELIEAVV 560
EYD R+KA E +QY D+ L DKQ I L EAVV
Sbjct: 523 EYDKRIKAFEESGDKPQQYVDLTRLRCDDKQTIVALAEAVV 563
>SB_53343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 779
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = +3
Query: 27 EEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEK 188
+ A+ E++ D VS R+ +NE+++ KSE + +Q K + E+
Sbjct: 121 QTAIQLEIVNFNDDSFVSGNRMSNNEVRVTKSESLSSPSNSYSQAFKSNNSREE 174
>SB_36974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 28.7 bits (61), Expect = 4.2
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +3
Query: 234 ELLDVDPQEEEEDGAVVD 287
+++D+ PQ+EEEDG V++
Sbjct: 527 DIVDLQPQDEEEDGEVIE 544
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = +3
Query: 39 SEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKE 176
S E DE+V R L +E+K +K E + ++++ N K+++
Sbjct: 700 SLETCSKERDELVESNRNLGSELKALKKENEELVSQVESLNQKVEQ 745
>SB_33833| Best HMM Match : DUF947 (HMM E-Value=0.2)
Length = 1106
Score = 28.7 bits (61), Expect = 4.2
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +3
Query: 234 ELLDVDPQEEEEDGAVVD 287
+++D+ PQ+EEEDG V++
Sbjct: 982 DIVDLQPQDEEEDGEVIE 999
>SB_11401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 439
Score = 28.7 bits (61), Expect = 4.2
Identities = 9/18 (50%), Positives = 16/18 (88%)
Frame = +3
Query: 234 ELLDVDPQEEEEDGAVVD 287
+++D+ PQ+EEEDG V++
Sbjct: 22 DIVDLQPQDEEEDGEVIE 39
>SB_41890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 96 DNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIE 236
D +K + SE ++ EL Q DKI KIK+ P + ++IE
Sbjct: 104 DQPMKKLGSEFETVTGELLTQLDKISRGVRKIKLVSGDPRDIQSLIE 150
>SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64)
Length = 500
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +3
Query: 6 KSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTE 185
KS+ + G+ + DE+ R L+ E+K +KSE + Q N ++
Sbjct: 224 KSLKKGGDLLFPGASYKRKLDEVAGRLDELEREVKRLKSETCQTKMTCQPCNHQLLMVGP 283
Query: 186 KIKVNKTLP 212
+ + TLP
Sbjct: 284 TVPIPPTLP 292
>SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037)
Length = 1127
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +3
Query: 18 EDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKI 170
++ E L + LR E S+ + LD+E+ + + ++ HELQ + +I
Sbjct: 910 QEAEFELKLDDLRADIQERDSQIKELDSEMAEVTENIAKLQHELQGKGQEI 960
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 28.3 bits (60), Expect = 5.6
Identities = 38/168 (22%), Positives = 69/168 (41%), Gaps = 8/168 (4%)
Frame = +3
Query: 27 EEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKI----- 191
E L++ L M + + L+N ++ +++++ S Q D + NT+++
Sbjct: 822 ESNLAKRQLEMDNTHHKNLIKTLENRVQELQTQIDTESRSNQQARDMLVRNTKEMERLEF 881
Query: 192 ---KVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVI 362
+V L V ELL +P ++ D+D RK KT + T +
Sbjct: 882 KNTEVKAQLEAAEKRVHELLSKEPSSDQ------DIDKMRKETEEKFKTDLQDT----EL 931
Query: 363 GLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQY 506
L DAE K DL + + L E + A +A+ + TE++
Sbjct: 932 KLKDAE-AKIKDLETQLEQAKLHAEQFKSMSGANDEALREVNKSTEEF 978
>SB_46136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 57 MPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDK-IKENTEKIKVNKTLPYLVSNVI 233
M TD+ L+ ++ M SE++R+ + A++DK ++ E I+ L+ ++
Sbjct: 76 METDQANQSVSDLEGIVQSMGSEILRLQSLVSAEDDKMLRYKVENIRRKHNYIPLIMEML 135
Query: 234 ELL 242
+LL
Sbjct: 136 KLL 138
>SB_56573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 12 IWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHEL 149
I E +E ++ R+ EI+S+T +L ++IK + VMRI E+
Sbjct: 196 IIEGKKEFKLADLGRVTLKEIISKTSVLVSDIKGSRESVMRIPMEI 241
>SB_41319| Best HMM Match : NACHT (HMM E-Value=5.2e-14)
Length = 961
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 63 TDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVN 200
T+++V + +EI I E ++ HE++ + +I TEK+ V+
Sbjct: 376 TNKVVHEVKGKVSEISIKTDETNKVVHEVKGKVSEISIKTEKMAVD 421
>SB_32475| Best HMM Match : IWS1_C (HMM E-Value=0)
Length = 768
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 174 ENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGA 278
E ++ + ++T P N +E V P+ EEEDGA
Sbjct: 56 EGEKEDEASETSPRGSENSVESRSVSPKNEEEDGA 90
>SB_29265| Best HMM Match : OmpH (HMM E-Value=3)
Length = 218
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +3
Query: 237 LLDVDPQEEE--EDGAVVDLDSQ--RKGKCAVIKTSTRQTYFLPVIGLVD 374
L D D E E +D VD++++ KGK K+S + Y PV+ L D
Sbjct: 25 LCDTDAPEAEVVDDEPEVDVETETEEKGKAETKKSSEPEEYTPPVVALED 74
>SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)
Length = 1491
Score = 27.9 bits (59), Expect = 7.4
Identities = 37/193 (19%), Positives = 87/193 (45%), Gaps = 10/193 (5%)
Frame = +3
Query: 36 LSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNK-TLP 212
L EE+ + + + TR + E K++ + + ++ EL + KE + K +K L
Sbjct: 1005 LKEELTKAEKERTETATRA-EREKKLLTTTIQALTKELDKVKQQKKEMKKSFKRSKGDLQ 1063
Query: 213 YLVSNVIELLDVDPQEEEEDGAVVDLDSQR-KGKCAVIK--------TSTRQTYFLPVIG 365
N + + ++ +E G ++ + R K K IK +S + Y + +
Sbjct: 1064 NSFENERKQFEDSLEKSKEVGKMLAEEVMREKLKNETIKYEERINEMSSQMEAYEMKIEQ 1123
Query: 366 LVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGXLDKQIQEL 545
L + K + G+L + ++S + +ETL + D +++E E + + + ++ ++ L
Sbjct: 1124 LQNKFKAEKGELEDLLQESRVEMETLIEKQDEFRESLE-QEYQRKLHKEKQNIESTLESL 1182
Query: 546 IEAVVLPMTHKEK 584
+ + H+++
Sbjct: 1183 RQEISRLRDHRKQ 1195
>SB_45970| Best HMM Match : rve (HMM E-Value=1.7e-11)
Length = 717
Score = 27.9 bits (59), Expect = 7.4
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 3/128 (2%)
Frame = +3
Query: 243 DVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDS 422
D D +EE++DGA S + + + R+ Y+ + D E +P V KD
Sbjct: 398 DDDDEEEDDDGATEKNSSGQYTRLIHVLQEKRRKYYQLIQAEEDEETEQP-IRTNVEKD- 455
Query: 423 YLILETLPAEYDARVKAMEVDERPTEQYSDIGXLDKQI---QELIEAVVLPMTHKEKFVN 593
L+ R++ + D R + SD+ D I Q + + +P +EK
Sbjct: 456 ---LQDAKDRDWLRIEKQKAD-REAKPLSDLPGTDAIITSPQIKDKEIPIPKALQEKSSA 511
Query: 594 LGLPPTPK 617
L PP PK
Sbjct: 512 LLPPPQPK 519
>SB_38518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1399
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Frame = +3
Query: 240 LDVDPQEEEEDGAVVDLDSQRKGKCAVIKTS-TRQTY 347
+D P+E + DGAVV++ S +G V ++S +RQ+Y
Sbjct: 477 MDEVPEEMDSDGAVVNIQSAMRGH--VTRSSLSRQSY 511
>SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064)
Length = 1230
Score = 27.5 bits (58), Expect = 9.8
Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Frame = +3
Query: 156 QNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTS- 332
Q+DK+ + K++ + +++++ + + +DP EE +L S K + + K
Sbjct: 313 QDDKVAQAKAKLQHAEKASDVLTSMEKEMGLDPSTAEEK--TKNLTSVLKDEMSKFKDLI 370
Query: 333 TRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAME 479
+Q + EKL D+ G N LI+E A+Y A+ +A +
Sbjct: 371 NKQDDSVKKEKFEKLEKLAEEDVKGTNDVMKLIVELEVAKYFAKQRARQ 419
>SB_27802| Best HMM Match : Filament (HMM E-Value=0.2)
Length = 528
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/51 (23%), Positives = 29/51 (56%)
Frame = +3
Query: 42 EEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIK 194
E+ + +EI+ + IK+ + + R+ HE+Q +ND + ++ +++K
Sbjct: 114 EDEIAQEKEEILELKNKHSDSIKLAE-DTNRLLHEVQRKNDSLAKDMKRVK 163
>SB_45719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 429
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Frame = +3
Query: 96 DNEIKIMKSEVMRISHELQ---AQNDKIKENTEK 188
D++I+++KSE+ + S E+Q AQ D++K +K
Sbjct: 274 DDQIQMLKSELEKASTEMQGIAAQVDEVKSQADK 307
>SB_18003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/53 (22%), Positives = 26/53 (49%)
Frame = +3
Query: 18 EDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKE 176
+ E+ + R P D V ++++ E+K+ K+ + H ++ D+ KE
Sbjct: 309 QKSEKEVDASSERAPKDNKVRKSKIKTEELKVPKALEREVGHAKTSKKDESKE 361
>SB_7056| Best HMM Match : Seryl_tRNA_N (HMM E-Value=8.1)
Length = 94
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Frame = +3
Query: 93 LDNEIK----IMKSEVMRISHELQAQNDKIKENTEKIK 194
LD E++ +M E R++ ELQAQ DK+ ++++
Sbjct: 22 LDKELEWRRDVMNKEYTRLASELQAQEDKVLNMKQQVQ 59
>SB_4536| Best HMM Match : Krr1 (HMM E-Value=4)
Length = 246
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/75 (26%), Positives = 39/75 (52%)
Frame = +3
Query: 81 RTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQE 260
R R L+ ++ MK E +A+ K+ ++ K V+ +P+ N++ELL DP++
Sbjct: 93 RKRQLNILLEKMKGERSLRQQLNKARKSKMLKSRSKRLVDLGVPH---NLLELLPEDPED 149
Query: 261 EEEDGAVVDLDSQRK 305
+ +V+L R+
Sbjct: 150 AMPEEIIVELGRIRE 164
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,938,953
Number of Sequences: 59808
Number of extensions: 351453
Number of successful extensions: 1215
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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