Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0709
         (642 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     24   4.7  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   8.2  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   8.2  

>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 393 GDLVGVNKDSYLILETLPAEYDARVKAME 479
           G+ +  N    +IL +LP  +DA   A+E
Sbjct: 3   GEKLSANMQVAMILRSLPKAFDALTTALE 31


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 517  PISEYCSVGLSSTSIAFTLA 458
            PI+ +CS G+  T +  TL+
Sbjct: 1158 PITVHCSAGVGRTGVFITLS 1177


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
 Frame = +3

Query: 468  KAMEVDERPTEQYSDIGXLDKQIQE---LIEAVVLPMTHKEK 584
            KAM + ER  EQY ++    K +++    I+A++  +  ++K
Sbjct: 984  KAMVLLEREEEQYKEVMRRKKVVEDDKKKIQAIITDLDEEKK 1025


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,725
Number of Sequences: 2352
Number of extensions: 11215
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)