Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0709
(642 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 307 5e-84
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 91 5e-19
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 88 6e-18
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 78 6e-15
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 76 2e-14
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 73 2e-13
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 73 2e-13
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 66 2e-11
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 66 2e-11
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 63 2e-10
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 42 3e-04
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 37 0.014
U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily ass... 31 0.53
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 31 0.93
AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to ye... 30 1.2
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 30 1.6
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 30 1.6
AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA transcri... 29 2.1
AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like tra... 29 2.1
AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying de... 29 2.1
U50070-1|AAR85907.1| 778|Caenorhabditis elegans Forkhead transc... 29 2.8
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 29 2.8
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 29 2.8
U80454-5|AAB37877.1| 368|Caenorhabditis elegans Hypothetical pr... 29 3.7
AL110500-1|CAB60426.3| 780|Caenorhabditis elegans Hypothetical ... 29 3.7
AC024817-40|AAF59577.4| 967|Caenorhabditis elegans Hypothetical... 29 3.7
Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 28 4.9
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z19155-2|CAA79561.1| 1139|Caenorhabditis elegans Hypothetical pr... 27 8.6
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 27 8.6
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 27 8.6
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 27 8.6
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 27 8.6
U41279-6|AAK31423.1| 321|Caenorhabditis elegans Helix loop heli... 27 8.6
U41279-4|AAK31421.1| 313|Caenorhabditis elegans Helix loop heli... 27 8.6
L14745-16|AAA27916.2| 1010|Caenorhabditis elegans Kinetochore nu... 27 8.6
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 27 8.6
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 27 8.6
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 27 8.6
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 27 8.6
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 307 bits (753), Expect = 5e-84
Identities = 150/204 (73%), Positives = 176/204 (86%)
Frame = +3
Query: 27 EEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKT 206
E+A+ EE+L+M T+++ SRT LLDNEI+IM+SEV RI+H ++IKENTE+IKVNKT
Sbjct: 19 EDAIDEEILKMSTEDLKSRTHLLDNEIRIMRSEVQRINHSATTLKERIKENTERIKVNKT 78
Query: 207 LPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKL 386
LPYLVSNV+ELLD++ EEE GA VDLD+Q K KCAVIKTSTR TYFLPV+GLVD ++L
Sbjct: 79 LPYLVSNVVELLDLEDNTEEE-GANVDLDAQ-KTKCAVIKTSTRATYFLPVVGLVDPDEL 136
Query: 387 KPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGXLDKQIQELIEAVVLP 566
KPGDLVGVNKDSYLILE LPAEYD+RVKAMEVDERPTEQYSDIG DKQIQELIEAVVLP
Sbjct: 137 KPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLP 196
Query: 567 MTHKEKFVNLGLPPTPKEFFLFGP 638
MTHK++FVNLG+ P PK ++GP
Sbjct: 197 MTHKDRFVNLGIHP-PKGVLMYGP 219
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 91.5 bits (217), Expect = 5e-19
Identities = 42/108 (38%), Positives = 69/108 (63%)
Frame = +3
Query: 315 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 494
A++ ++T Y++ V+ ++D E LKPG V ++K S +++ LP E D+ ++ + DE+P
Sbjct: 97 AIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKP 156
Query: 495 TEQYSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFGP 638
Y DIG LD Q QE+ EAV LP+TH E + +G+ P P+ ++GP
Sbjct: 157 DISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDP-PRGVLMYGP 203
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 87.8 bits (208), Expect = 6e-18
Identities = 55/177 (31%), Positives = 97/177 (54%)
Frame = +3
Query: 105 IKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVV 284
+K++KSE RI L + + I +N E++K + ++ L P AV
Sbjct: 63 LKLLKSE--RIKDYLLMEQEFI-QNQERLKPQEERQEEERAKVDELRGTPM------AVG 113
Query: 285 DLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDAR 464
L+ + A++ T+ +++ ++ VD E+L+PG V +N ++ ++ L + D
Sbjct: 114 SLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPM 173
Query: 465 VKAMEVDERPTEQYSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFG 635
V M++++ P E Y+D+G LD+QIQE+ EAV LP+TH E + +G+ P PK L+G
Sbjct: 174 VSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRP-PKGVILYG 229
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 77.8 bits (183), Expect = 6e-15
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 1/168 (0%)
Frame = +3
Query: 138 SHELQAQNDKIKENTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVV-DLDSQRKGKC 314
S ++ K+ + ++ ++ + ++ + +L + Q+ E G+ V ++ K
Sbjct: 35 STKVDDAQQKVADKSQNVRRLQAQRNELNTKVRMLKEELQQLHEQGSYVGEVSKAMDKKK 94
Query: 315 AVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERP 494
++K Y + V +D L G V + DSY + + LP + D V M V++ P
Sbjct: 95 VLVKVHPEGKYVVDVDKSIDINSLNTGARVALRADSYALHKLLPNKVDPLVSLMMVEKVP 154
Query: 495 TEQYSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFGP 638
Y +G LDKQI+E+ E + LP+ H E F LG+ PK LFGP
Sbjct: 155 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI-AQPKGVLLFGP 201
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 76.2 bits (179), Expect = 2e-14
Identities = 37/85 (43%), Positives = 54/85 (63%)
Frame = +3
Query: 384 LKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGXLDKQIQELIEAVVL 563
++ G VGV+++ Y I LPA+ D V M+V+E+P YSD+G QI++L E V
Sbjct: 136 IEEGMRVGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVET 195
Query: 564 PMTHKEKFVNLGLPPTPKEFFLFGP 638
P+ H E++VNLG+ P PK L+GP
Sbjct: 196 PLLHPERYVNLGIEP-PKGVLLYGP 219
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 72.5 bits (170), Expect = 2e-13
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
Frame = +3
Query: 231 IELLDVDPQEEEEDGAVV-DLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVG 407
+ LL + E G+ V ++ K ++K Y + V VD L G V
Sbjct: 61 VRLLKEEISHLHEQGSHVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVA 120
Query: 408 VNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGXLDKQIQELIEAVVLPMTHKEKF 587
+ D+Y I E LP++ D V M V++ P Y +G LD QI+E+ E + LP+ H E F
Sbjct: 121 LRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELF 180
Query: 588 VNLGLPPTPKEFFLFGP 638
LG+ PK L+GP
Sbjct: 181 DALGI-AQPKGVLLYGP 196
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 72.5 bits (170), Expect = 2e-13
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
Frame = +3
Query: 231 IELLDVDPQEEEEDGAVV-DLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVG 407
+ LL + E G+ V ++ K ++K Y + V VD L G V
Sbjct: 82 VRLLKEEISHLHEQGSHVGEVCKAMDKKKVLVKNHPDGKYIVDVAASVDISTLAAGTRVA 141
Query: 408 VNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGXLDKQIQELIEAVVLPMTHKEKF 587
+ D+Y I E LP++ D V M V++ P Y +G LD QI+E+ E + LP+ H E F
Sbjct: 142 LRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELF 201
Query: 588 VNLGLPPTPKEFFLFGP 638
LG+ PK L+GP
Sbjct: 202 DALGI-AQPKGVLLYGP 217
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/107 (34%), Positives = 57/107 (53%)
Frame = +3
Query: 318 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPT 497
++K + Y + ++ E+LK G V ++ + I+ LP E D V M ++
Sbjct: 79 IVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGN 138
Query: 498 EQYSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFGP 638
YSD+G L +QI+EL E V LP+ + E F +G+ P PK LFGP
Sbjct: 139 ISYSDVGGLAEQIRELREVVELPLINPELFKRVGITP-PKGCLLFGP 184
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 66.5 bits (155), Expect = 2e-11
Identities = 37/107 (34%), Positives = 57/107 (53%)
Frame = +3
Query: 318 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDARVKAMEVDERPT 497
++K + Y + ++ E+LK G V ++ + I+ LP E D V M ++
Sbjct: 87 IVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGN 146
Query: 498 EQYSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFGP 638
YSD+G L +QI+EL E V LP+ + E F +G+ P PK LFGP
Sbjct: 147 ISYSDVGGLAEQIRELREVVELPLINPELFKRVGITP-PKGCLLFGP 192
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Frame = +3
Query: 318 VIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYL------ILETLPAEYDARVKAME 479
V+ +R+ +++P++ +VD + L+ LV V I+ L + D+ +
Sbjct: 114 VVVEGSRREWYVPILSIVDKDLLRLNALVMVKAGGMFKTVPSAIVGVLDDKIDSNAMGHK 173
Query: 480 VDERPTEQYSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFG 635
V++ P E + DIG + QIQEL E+V LP+TH E + +G+ PK L+G
Sbjct: 174 VEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGI-TAPKGVILYG 224
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 465 VKAMEVDERPTEQ-YSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFGP 638
+K E +E E Y D+G + KQ+ ++ E V LP+ H + F +G+ P P+ LFGP
Sbjct: 194 IKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKP-PRGILLFGP 251
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = +3
Query: 480 VDERPTEQYSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFGP 638
V E P +SDIG L +EL E V P+ H EK++ G+ P+ F +GP
Sbjct: 473 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLF-YGP 524
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 465 VKAMEVDERPTEQ-YSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFGP 638
+K E +E E Y D+G + KQ+ ++ E V LP+ H + F +G+ P P+ LFGP
Sbjct: 194 IKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKP-PRGILLFGP 251
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = +3
Query: 480 VDERPTEQYSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFGP 638
V E P +SDIG L +EL E V P+ H EK++ G+ P+ F +GP
Sbjct: 473 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLF-YGP 524
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 465 VKAMEVDERPTE-QYSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFGP 638
+K E +E + Y D+G + KQ+ ++ E V LP+ H + F +G+ P P+ LFGP
Sbjct: 195 IKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKP-PRGILLFGP 252
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = +3
Query: 480 VDERPTEQYSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFGP 638
V E P +SDIG L +EL E V P+ H EK++ G+ P+ F +GP
Sbjct: 474 VVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLF-YGP 525
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +3
Query: 486 ERPTEQYSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFGP 638
E P ++DIG ++ E+ +AV+ P H E F G+ P P L+GP
Sbjct: 452 EVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDP-PAGILLYGP 501
>U97001-5|AAB52260.3| 1592|Caenorhabditis elegans Temporarily
assigned gene nameprotein 59 protein.
Length = 1592
Score = 31.5 bits (68), Expect = 0.53
Identities = 16/59 (27%), Positives = 34/59 (57%)
Frame = +3
Query: 27 EEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNK 203
+EAL+++ + P DEIV+ + E+K +++ E+Q + D I ++ +++ V K
Sbjct: 511 DEALAQQQQK-PKDEIVAESEKKLKELKERNKQLVMEKSEIQRELDNINDHLDQVLVEK 568
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical protein
C50C3.2 protein.
Length = 2107
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/62 (27%), Positives = 35/62 (56%)
Frame = +3
Query: 21 DGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVN 200
D + L+ + +M DE++ RT++ I ++ + ++++ EL+ + KIKE+ E K
Sbjct: 1587 DHMDTLTIKAEQMSDDEVI-RTKVAVTAIDQLRKKWLKMNEELKKMHQKIKESIEFTKFV 1645
Query: 201 KT 206
T
Sbjct: 1646 ST 1647
>AC024756-9|AAK29883.4| 430|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 4 protein.
Length = 430
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +3
Query: 450 EYDARVKAMEVDERPTEQYSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFL 629
++ ++ V E+P +++DI L+ + L EAV+LP+ + F P + L
Sbjct: 99 KFQDKLSGAIVMEKPNVKWTDIAGLEGAKEALKEAVILPIKFPQLFTGNRKP--WQGILL 156
Query: 630 FGP 638
FGP
Sbjct: 157 FGP 159
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/79 (25%), Positives = 40/79 (50%)
Frame = +3
Query: 33 ALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTLP 212
AL E L++ T+ L +I+++KSE R+S ++Q ++ +N EK+ ++ L
Sbjct: 280 ALQSEKLKL-TEISQQEISGLKKKIEVLKSENHRLSSQIQQNTNEAAKNHEKLLEDRVLL 338
Query: 213 YLVSNVIELLDVDPQEEEE 269
+E+ D+ E +
Sbjct: 339 LETRYQLEVDDLKKSFESD 357
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +3
Query: 504 YSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFGP 638
++D+ L+ + L E VVLP + F + P PK LFGP
Sbjct: 315 WADVAGLEGAKKALREIVVLPFKRPDVFTGIRAP--PKGVLLFGP 357
>AY462219-1|AAR26006.1| 358|Caenorhabditis elegans GATA
transcription factor EGL-18A protein.
Length = 358
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 21 DGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDK-IKENTE 185
+ E EVL+ P+DE S + L ++ S VM +LQ + D+ +KEN E
Sbjct: 12 ESAEQQHHEVLQRPSDEPCSGCKQLQKDVAKTISMVMERMDKLQYRLDELLKENNE 67
>AF353302-1|AAK32716.1| 376|Caenorhabditis elegans GATA-like
transcription factorELT-5 protein.
Length = 376
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 21 DGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDK-IKENTE 185
+ E EVL+ P+DE S + L ++ S VM +LQ + D+ +KEN E
Sbjct: 12 ESAEQQHHEVLQRPSDEPCSGCKQLQKDVAKTISMVMERMDKLQYRLDELLKENNE 67
>AF067612-7|AAD36952.2| 376|Caenorhabditis elegans Egg laying
defective protein 18 protein.
Length = 376
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 21 DGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDK-IKENTE 185
+ E EVL+ P+DE S + L ++ S VM +LQ + D+ +KEN E
Sbjct: 12 ESAEQQHHEVLQRPSDEPCSGCKQLQKDVAKTISMVMERMDKLQYRLDELLKENNE 67
>U50070-1|AAR85907.1| 778|Caenorhabditis elegans Forkhead
transcription factor familyprotein 7, isoform a protein.
Length = 778
Score = 29.1 bits (62), Expect = 2.8
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = +3
Query: 213 YLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKP 392
+L++ E +DV +EEEED + ++ + + K K S + F P+I A +L+
Sbjct: 31 HLLAEDEEQIDVVHEEEEEDMEEMKMEIEMQSKSLHQKPSGLRRSFRPLI----ASELRS 86
Query: 393 GDLVGVNKDSYLILETLPAEYDA 461
G + + DS L P+ D+
Sbjct: 87 GGIHKTSSDSNLKRLAGPSSSDS 109
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 492 PTEQYSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFGP 638
P + DIG L + ++L +++ P+ + F LG+ P+ L GP
Sbjct: 528 PDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGP 576
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 492 PTEQYSDIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFGP 638
P + DIG L + ++L +++ P+ + F LG+ P+ L GP
Sbjct: 528 PDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGP 576
>U80454-5|AAB37877.1| 368|Caenorhabditis elegans Hypothetical
protein T16A1.8 protein.
Length = 368
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Frame = +3
Query: 6 KSIWEDGEEALSEEVLRMPTDEIV---SRTRLLDNEIKIMKSEVMRISHELQAQNDKIKE 176
KSI E L V ++ +EIV T +DN++ K+ + I H ++ N ++K
Sbjct: 180 KSILIQNLEELQFNVSKVTLNEIVLVNCSTITIDNQVISDKNLNLFIKHWIKGSNCQLKS 239
Query: 177 NTEKIKVNKTLPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKCAVIKTSTRQTYFL 353
I+ + L ++ ++ E + +EE++ ++ K V+ + T F+
Sbjct: 240 FEYHIRPTERLRFVEVSLFEGIGYMEKEEDDHWKRFEIKRNDGTKATVLLSKTDYISFV 298
>AL110500-1|CAB60426.3| 780|Caenorhabditis elegans Hypothetical
protein Y87G2A.1 protein.
Length = 780
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/96 (22%), Positives = 43/96 (44%)
Frame = +3
Query: 27 EEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKT 206
+E + EEV+ + T +++ + + +SE + + HE+ D + + +
Sbjct: 19 DEEIIEEVIEEEQVPWLGPTDVMEGQGEYYQSEEL-LEHEMVEYEDA-EPYQSFLPIRDG 76
Query: 207 LPYLVSNVIELLDVDPQEEEEDGAVVDLDSQRKGKC 314
PY N+ +LL Q ++ G +V L S KC
Sbjct: 77 APYFSLNLPDLLSKAHQITQDTGVIVRLTSCFNKKC 112
>AC024817-40|AAF59577.4| 967|Caenorhabditis elegans Hypothetical
protein Y54G2A.21 protein.
Length = 967
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +3
Query: 69 EIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKV 197
E + + ++L I+ +K+E IS E+Q QND +E+I++
Sbjct: 141 EQIPQIKMLRLTIERLKNEKNEISEEIQKQNDAFAVFSEEIQI 183
>Z95310-3|CAB08562.3| 1026|Caenorhabditis elegans Hypothetical
protein H40L08.3 protein.
Length = 1026
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 93 LDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVN 200
L IK +K E ++ EL A D+ + NT+K+K N
Sbjct: 837 LKKTIKELKFETLKKHEELGALRDEKEANTQKLKEN 872
>Z92790-6|CAH60783.2| 1026|Caenorhabditis elegans Hypothetical
protein H40L08.3 protein.
Length = 1026
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 93 LDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVN 200
L IK +K E ++ EL A D+ + NT+K+K N
Sbjct: 837 LKKTIKELKFETLKKHEELGALRDEKEANTQKLKEN 872
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = +3
Query: 30 EALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTL 209
+ LS+E +E+ E K + M L +D + + + K KT
Sbjct: 1123 DLLSDEQFMKQVEEVEDENNQAVAERKKQRKRKMA---GLDENDDSMDDVVLQHKKKKTD 1179
Query: 210 PYLVSNVIELLDVDPQEEEEDGAVV 284
P L + E+LDV + + EDG ++
Sbjct: 1180 PELAEKINEMLDVILEYKNEDGELI 1204
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = +3
Query: 30 EALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTL 209
+ LS+E +E+ E K + M L +D + + + K KT
Sbjct: 1123 DLLSDEQFMKQVEEVEDENNQAVAERKKQRKRKMA---GLDENDDSMDDVVLQHKKKKTD 1179
Query: 210 PYLVSNVIELLDVDPQEEEEDGAVV 284
P L + E+LDV + + EDG ++
Sbjct: 1180 PELAEKINEMLDVILEYKNEDGELI 1204
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/85 (24%), Positives = 36/85 (42%)
Frame = +3
Query: 30 EALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNKTL 209
+ LS+E +E+ E K + M L +D + + + K KT
Sbjct: 1123 DLLSDEQFMKQVEEVEDENNQAVAERKKQRKRKMA---GLDENDDSMDDVVLQHKKKKTD 1179
Query: 210 PYLVSNVIELLDVDPQEEEEDGAVV 284
P L + E+LDV + + EDG ++
Sbjct: 1180 PELAEKINEMLDVILEYKNEDGELI 1204
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 510 DIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFGPS 641
D+G + +Q + L + ++ P + + F ++G+ P K L GPS
Sbjct: 3 DVGGMFEQKKLLEQVIIWPRKYPQLFESVGV-PVSKGILLHGPS 45
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical
protein C11H1.4a protein.
Length = 996
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 510 DIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFGPS 641
D+G + +Q + L + ++ P + + F ++G+ P K L GPS
Sbjct: 729 DVGGMFEQKKLLEQVIIWPRKYPQLFESVGV-PVSKGILLHGPS 771
>Z19155-2|CAA79561.1| 1139|Caenorhabditis elegans Hypothetical protein
F54G8.3 protein.
Length = 1139
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 423 YLILETLPAEYDARVKAMEVDERPTEQYSDIGXLDKQI 536
Y ET P + R+K E+DE EQ D+G +++ I
Sbjct: 928 YSTQETAPHRVEHRMKR-EIDEDEEEQSDDLGAVEENI 964
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +3
Query: 6 KSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTE 185
K W+D +E+ + TD R+ E K +++ + +LQA ND+I T+
Sbjct: 1218 KDEWDDFRNDADKEIQKWKTDAYTVRS-----EAKALETTNTALKAQLQAANDRIDHLTK 1272
Query: 186 KI 191
+
Sbjct: 1273 TV 1274
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +3
Query: 6 KSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTE 185
K W+D +E+ + TD R+ E K +++ + +LQA ND+I T+
Sbjct: 1291 KDEWDDFRNDADKEIQKWKTDAYTVRS-----EAKALETTNTALKAQLQAANDRIDHLTK 1345
Query: 186 KI 191
+
Sbjct: 1346 TV 1347
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +3
Query: 6 KSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTE 185
K W+D +E+ + TD R+ E K +++ + +LQA ND+I T+
Sbjct: 1291 KDEWDDFRNDADKEIQKWKTDAYTVRS-----EAKALETTNTALKAQLQAANDRIDHLTK 1345
Query: 186 KI 191
+
Sbjct: 1346 TV 1347
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/99 (22%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Frame = +3
Query: 63 TDEIVSRTRLLDNEIKIMKSEVMRISHELQ-----AQNDKIKENTEKIKVNKTLPYLVSN 227
T + + RLL EI ++ EV +S L+ A+ K K + ++K L ++ ++
Sbjct: 549 TSKSIETERLLQGEIVALQKEVSIVSESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS 608
Query: 228 VIELLDVD-PQEEEEDGAVVDLDSQRKGKCAVIKTSTRQ 341
+ +++ +E E+ + +L+ QR ++I+ R+
Sbjct: 609 RKRIAELELSSKESENRSSEELEEQRLYYVSMIEDLERK 647
>U41279-6|AAK31423.1| 321|Caenorhabditis elegans Helix loop helix
protein 27 protein.
Length = 321
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +3
Query: 27 EEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNK 203
EE +S+EV+ ++V+ L N SE R + +++ K+K EKI+ K
Sbjct: 102 EEHISQEVVLFRIVKLVTGVNLESNFSSNDLSESTRRKFDTESERRKVKTEREKIRRKK 160
>U41279-4|AAK31421.1| 313|Caenorhabditis elegans Helix loop helix
protein 25 protein.
Length = 313
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +3
Query: 27 EEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENTEKIKVNK 203
EE +S+EV+ ++V+ L N SE R + +++ K+K EKI+ K
Sbjct: 94 EEHISQEVVLFRIVKLVTGVNLESNFSSNDLSESTRRKFDTESERRKVKTEREKIRRKK 152
>L14745-16|AAA27916.2| 1010|Caenorhabditis elegans Kinetochore null
protein 1 protein.
Length = 1010
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +3
Query: 108 KIMKSEVMRISHELQAQNDKIKENTEKIKVNKT 206
+I+++E M++ HE+ + N + + EKI + KT
Sbjct: 820 RIVENEKMKVQHEIDSLNSTNQLSAEKIDMLKT 852
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/99 (22%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Frame = +3
Query: 63 TDEIVSRTRLLDNEIKIMKSEVMRISHELQ-----AQNDKIKENTEKIKVNKTLPYLVSN 227
T + + RLL EI ++ EV +S L+ A+ K K + ++K L ++ ++
Sbjct: 549 TSKSIETERLLQGEIVALQKEVSIVSESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS 608
Query: 228 VIELLDVD-PQEEEEDGAVVDLDSQRKGKCAVIKTSTRQ 341
+ +++ +E E+ + +L+ QR ++I+ R+
Sbjct: 609 RKRIAELELSSKESENRSSEELEEQRLYYVSMIEDLERK 647
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/67 (20%), Positives = 30/67 (44%)
Frame = +3
Query: 3 DKSIWEDGEEALSEEVLRMPTDEIVSRTRLLDNEIKIMKSEVMRISHELQAQNDKIKENT 182
+K E+ E+ + E E R + ++K + + +++ + +K+K
Sbjct: 889 EKEAEEENEKLIPERKRMEAIKEEEERVKAEREKVKKEEERLKAEEEKVKVEKEKVKAEE 948
Query: 183 EKIKVNK 203
EK+KV K
Sbjct: 949 EKVKVEK 955
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 510 DIGXLDKQIQELIEAVVLPMTHKEKFVNLGLPPTPKEFFLFGPS 641
D+G + +Q + L + ++ P + + F ++G+ P K L GPS
Sbjct: 729 DVGGMFEQKKLLEQVIIWPRKYPQLFESVGV-PVSKGILLHGPS 771
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 27.5 bits (58), Expect = 8.6
Identities = 22/99 (22%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Frame = +3
Query: 63 TDEIVSRTRLLDNEIKIMKSEVMRISHELQ-----AQNDKIKENTEKIKVNKTLPYLVSN 227
T + + RLL EI ++ EV +S L+ A+ K K + ++K L ++ ++
Sbjct: 547 TSKSIETERLLQGEIVALQKEVSIVSESLRKSEAVAEGYKEKVTANNLTLDKLLLHIDAS 606
Query: 228 VIELLDVD-PQEEEEDGAVVDLDSQRKGKCAVIKTSTRQ 341
+ +++ +E E+ + +L+ QR ++I+ R+
Sbjct: 607 RKRIAELELSSKESENRSSEELEEQRLYYVSMIEDLERK 645
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,498,903
Number of Sequences: 27780
Number of extensions: 267625
Number of successful extensions: 1072
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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