Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0707
(710 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0681 - 5059082-5059217,5059318-5059783,5059869-5060072,506... 40 0.002
06_03_0842 + 25307509-25308049,25308507-25308659,25308770-253089... 40 0.003
06_01_1136 + 9407282-9407663,9408075-9408227,9408336-9408539,940... 38 0.010
07_01_0882 + 7342606-7342842,7343601-7344245,7344515-7344907 37 0.014
02_05_0601 - 30278455-30278572,30280211-30280676,30280748-302809... 37 0.018
06_03_0915 - 25929433-25930893 36 0.032
06_03_0442 + 20837492-20837621,20841842-20842075,20842435-208425... 34 0.13
03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434 33 0.22
01_06_1541 - 38127014-38128022,38128116-38128209,38128302-381285... 33 0.30
02_01_0008 - 50576-50671,50767-50829,50918-50961,51048-51129,522... 32 0.52
07_03_1369 + 26087947-26088039,26088396-26089073 31 0.68
07_03_0763 - 21331534-21331779,21331871-21332021,21332093-213323... 31 1.2
01_06_1569 - 38304077-38304873,38304956-38305498,38305582-38305708 31 1.2
12_01_0599 - 4892146-4893552 30 2.1
12_01_0597 + 4880134-4880191,4880761-4880994,4881150-4881208,488... 30 2.1
07_03_1575 - 27848977-27849095,27849254-27849302,27850270-278502... 30 2.1
04_04_0196 - 23496899-23496903,23497758-23497994,23498106-23498196 29 2.8
12_01_0522 - 4143921-4144556,4144656-4144798,4144903-4145551 29 3.6
12_01_0520 + 4120030-4120678,4120783-4120925,4121025-4121660 29 3.6
12_01_0444 - 3502460-3502522,3502737-3502741,3502987-3503051,350... 29 4.8
07_01_0248 - 1821340-1821996,1823619-1823761,1824239-1824453,182... 29 4.8
06_01_0874 - 6702059-6702733,6703146-6703521,6703677-6703770,670... 29 4.8
02_01_0018 + 119890-120238,120331-120424,120518-121529 29 4.8
11_06_0736 - 26784531-26785814 28 6.4
11_01_0597 + 4769748-4770166,4770263-4770545,4770725-4771360 28 6.4
04_04_0338 + 24509698-24510042,24510373-24510490,24510539-245106... 28 6.4
02_05_0565 + 30010395-30010485,30011604-30011678,30011913-300121... 28 6.4
01_06_1540 - 38111557-38111985,38112087-38112311,38112494-381128... 28 6.4
10_02_0156 + 5946160-5946423,5946558-5947063,5947430-5947486,594... 28 8.4
05_06_0075 - 25379820-25380776,25380851-25381179,25381255-25381453 28 8.4
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117... 28 8.4
03_01_0285 + 2205165-2206781 28 8.4
02_05_0213 + 26815889-26816475,26817718-26817788,26817985-268180... 28 8.4
02_04_0003 + 18832467-18832543,18832627-18832849,18832985-188333... 28 8.4
>02_01_0681 -
5059082-5059217,5059318-5059783,5059869-5060072,
5060163-5060315,5060849-5061269
Length = 459
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Frame = +2
Query: 284 SSKIELAYNGSREDMGPYVPANHRPM---ESNTSSF-GALAHLLKASLGSGVLAMPLAFK 451
S +++ R++ P +P E N +SF GA+ +L +G+G++A+P + K
Sbjct: 9 SDSRHVSHKEIRDETTPLLPIKEEEEGIHEFNGASFSGAVFNLSTTIVGAGIMALPASIK 68
Query: 452 NAGLLVGCIGTMLIGLICGHVIHILVKTSQQ 544
G++ G + +L+ L+ I +LV+ S +
Sbjct: 69 MLGIIPGILMIILVALLTEASIDMLVRCSHE 99
>06_03_0842 +
25307509-25308049,25308507-25308659,25308770-25308973,
25309056-25309521,25309614-25309746
Length = 498
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Frame = +2
Query: 296 ELAYNGSREDMGPYVPANHRPM---ESNTSSF-GALAHLLKASLGSGVLAMPLAFKNAGL 463
++ +R++ P +P E N +SF GA+ +L +G+G++A+P + K G+
Sbjct: 53 QIVQKETRDETTPLLPVKVEEEGFHEFNGASFSGAVFNLSTTIVGAGIMALPASIKMLGI 112
Query: 464 LVGCIGTMLIGLICGHVIHILVKTSQQ 544
+ G + +++ L+ I +LV+ S Q
Sbjct: 113 IPGILMIIVVALLTEASIDMLVRCSHQ 139
>06_01_1136 +
9407282-9407663,9408075-9408227,9408336-9408539,
9408709-9409174,9409434-9409575
Length = 448
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +2
Query: 332 PYVPANHRPMESNTSSFGALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGH 511
P +P GA+ +L +G+G++A+P K GL G + +L L+
Sbjct: 16 PLLPTKREGGGGGGEFAGAVFNLSTTIVGAGIMALPATMKVLGLAPGLVAILLAALLTDA 75
Query: 512 VIHILVKTSQ 541
I +LV++S+
Sbjct: 76 SIELLVRSSR 85
>07_01_0882 + 7342606-7342842,7343601-7344245,7344515-7344907
Length = 424
Score = 37.1 bits (82), Expect = 0.014
Identities = 30/124 (24%), Positives = 55/124 (44%)
Frame = +2
Query: 338 VPANHRPMESNTSSFGALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVI 517
V R +S L +++ + +G+GVL +P AF+ AG + G +G G + +
Sbjct: 17 VEGRRRGGGGGATSAQTLGNVVVSIVGTGVLGLPYAFRTAGWVAGSLGVAAAGCATLYCM 76
Query: 518 HILVKTSQQLCVEVKKPALGYADTCEIVFQNGPKPIRKFASIARELVDWSLAVTHMGACC 697
+LV +L E K+ +T + G + F +I R L + + V+ G
Sbjct: 77 LLLVDCRDKL--EEKES----EETYHGHYTYGDLGEKCFGTIGRCLTEILILVSQAGGSV 130
Query: 698 VYVV 709
Y++
Sbjct: 131 AYLI 134
>02_05_0601 -
30278455-30278572,30280211-30280676,30280748-30280951,
30281065-30281220,30281336-30281738
Length = 448
Score = 36.7 bits (81), Expect = 0.018
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +2
Query: 383 GALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVKTSQQLCVEVK 562
GA+ +L +G+G++A+P K GL+ G I ML ++ I +LV+ S+ +
Sbjct: 40 GAVFNLSTTIVGAGIMALPATMKVLGLVPGLILVMLAAVLTDASIELLVRFSRAVGATSY 99
Query: 563 KPALGYA 583
A+G A
Sbjct: 100 GEAMGDA 106
>06_03_0915 - 25929433-25930893
Length = 486
Score = 35.9 bits (79), Expect = 0.032
Identities = 14/49 (28%), Positives = 31/49 (63%)
Frame = +2
Query: 386 ALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVK 532
A+ +L + +G+G++A+P K G+ VG + +++G++ I +LV+
Sbjct: 79 AVFNLATSIIGAGIMALPATMKVLGVAVGLVSILVMGILSEVTIELLVR 127
>06_03_0442 +
20837492-20837621,20841842-20842075,20842435-20842528,
20842653-20842870,20842956-20843095,20843231-20843878
Length = 487
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2
Query: 386 ALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLI 502
A AH++ A +GSGVL++ A G +VG + ML LI
Sbjct: 49 ASAHIITAVIGSGVLSLAWATAQLGWVVGPVTLMLFALI 87
>03_06_0456 + 34057986-34058186,34058295-34058978,34059063-34059434
Length = 418
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +2
Query: 389 LAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVKTSQQL 547
L +++ + +G+GVL +P AF+ +G L G +G G + + +L+ +L
Sbjct: 22 LGNIVVSIVGTGVLGLPYAFRTSGWLAGALGVAGAGAATFYCMLLLLDCRDKL 74
>01_06_1541 -
38127014-38128022,38128116-38128209,38128302-38128535,
38128643-38128744,38130893-38130956
Length = 500
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +2
Query: 332 PYVPANHRPMESNTSSFGALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLI 502
P VP + + + A H + A +GSGVLA+P + G ++G I ++ I
Sbjct: 43 PGVPRDQEGKNVTRTVWTATTHAITAVIGSGVLALPWSVAQMGWVLGPIALVVCAYI 99
>02_01_0008 -
50576-50671,50767-50829,50918-50961,51048-51129,
52205-52371,52502-52654,52780-52960,53452-53540,
53599-53799,54804-55147,55397-55626
Length = 549
Score = 31.9 bits (69), Expect = 0.52
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2
Query: 320 EDMGPYVPANHRPMESNTSSFGALAHLLKASLGSGVLAMPLAFKNAGLL 466
ED P VPA+ P S A+ + + G G+L+ P A K G L
Sbjct: 166 EDQKPLVPAHEVPAYQQCSYTQAVMNGINVLCGVGILSTPYAIKQGGWL 214
>07_03_1369 + 26087947-26088039,26088396-26089073
Length = 256
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +1
Query: 61 NFECNFVAL----VFSFFMCCD*KCKGTIECKVPMKNKPQENIKI 183
N ECN A +F + C D K ++C++PM+ K ++ +K+
Sbjct: 209 NLECNRDAAGETQLFQVYQCVDRSGKKLVDCQLPMQGKCRDKVKL 253
>07_03_0763 -
21331534-21331779,21331871-21332021,21332093-21332330,
21332449-21332659,21332744-21332871,21333569-21333706,
21333825-21334644
Length = 643
Score = 30.7 bits (66), Expect = 1.2
Identities = 31/119 (26%), Positives = 54/119 (45%)
Frame = +2
Query: 308 NGSREDMGPYVPANHRPMESNTSSFGALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTM 487
+G+ + G Y AN + + ++ S+ + + L AS SG + P A L G +
Sbjct: 35 SGNYTEHGTY-HANIQYLATSLPSYASSSPSLFASGSSGTV--PDAIYALALCRGDTNSS 91
Query: 488 LIGLICGHVIHILVKTSQQLCVEVKKPALGYADTCEIVFQNGPKPIRKFASIARELVDW 664
C + ++++Q+LC VK + Y DTC + F N PI ++ +V W
Sbjct: 92 S----CATCVAAAIQSAQELCPLVKT-VIVYDDTCILRFANDAFPISPTSNSQGMVVAW 145
>01_06_1569 - 38304077-38304873,38304956-38305498,38305582-38305708
Length = 488
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 353 RPMESNTSSFGALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHIL 526
RP + T + A AH++ A +GSGVL++ A G + G +L L+ + +L
Sbjct: 38 RPRRNGTM-WTASAHIITAVIGSGVLSLGWAIAQLGWVAGPAVMVLFSLVTYYTSSLL 94
>12_01_0599 - 4892146-4893552
Length = 468
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 353 RPMESNTSSFGALAHLLKASLGSGVLAMPLAFKNAGLLVG 472
RP + T + A AH++ A +GSGVL++P A G + G
Sbjct: 27 RPRRTGTF-WTASAHIITAVIGSGVLSLPWATAQLGWVGG 65
>12_01_0597 +
4880134-4880191,4880761-4880994,4881150-4881208,
4883125-4883562
Length = 262
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/67 (29%), Positives = 31/67 (46%)
Frame = +2
Query: 386 ALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVKTSQQLCVEVKK 565
A +H++ A +GSGVLA+ G +VG + +L+G C + T C
Sbjct: 25 ATSHIVAAVVGSGVLALAWTVAQLGWVVGPL--VLVGFSC---VTYYTSTLLANCYRYPD 79
Query: 566 PALGYAD 586
P G A+
Sbjct: 80 PVTGTAN 86
>07_03_1575 -
27848977-27849095,27849254-27849302,27850270-27850287,
27850798-27851786,27852119-27852733,27852893-27852921,
27853990-27854453,27854530-27854654,27854743-27855025,
27855112-27856102,27856965-27857576,27857666-27858630
Length = 1752
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 500 ICGHVIHILVKTSQQLCVEVKKPALGYADTCEI 598
IC +I T Q+L VE++K G+ ++C+I
Sbjct: 745 ICKKYANIFALTDQKLSVELRKEKCGWCNSCQI 777
>04_04_0196 - 23496899-23496903,23497758-23497994,23498106-23498196
Length = 110
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +2
Query: 350 HRPMESNTSSFGALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLI 493
H + + + + A AH++ A +GSGVL++ + G L G G ML+
Sbjct: 24 HAAIVRSGTEWTAAAHVITAVIGSGVLSLAWSVAQLGWLAG-PGMMLV 70
>12_01_0522 - 4143921-4144556,4144656-4144798,4144903-4145551
Length = 475
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +2
Query: 386 ALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVKTSQQLCVEVKK 565
A AH++ A +GSGVL++ A G + G +L + + +L + C
Sbjct: 41 ASAHIITAVIGSGVLSLAWAIAQLGWVAGPAVMLLFAFVIYYTSTLLAE-----CYRTGD 95
Query: 566 PALG 577
PA G
Sbjct: 96 PATG 99
>12_01_0520 + 4120030-4120678,4120783-4120925,4121025-4121660
Length = 475
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +2
Query: 386 ALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVKTSQQLCVEVKK 565
A AH++ A +GSGVL++ A G + G +L + + +L + C
Sbjct: 41 ASAHIITAVIGSGVLSLAWAIAQLGWVAGPAVMLLFAFVIYYTSTLLAE-----CYRTGD 95
Query: 566 PALG 577
PA G
Sbjct: 96 PATG 99
>12_01_0444 -
3502460-3502522,3502737-3502741,3502987-3503051,
3503301-3503369,3503487-3503579,3503667-3503770,
3503926-3504006,3504096-3504167,3504227-3504231,
3505788-3505865,3506849-3506978,3507216-3507406,
3507528-3507588,3507916-3508025,3508155-3508239
Length = 403
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = -3
Query: 576 PKAGFFTSTQSCCDVFTK-ICITCPQISPISIVPMQPTRRPAFLKANGIASTP 421
P+ FTST S D+ + +C+T P +SP V + PA L++ S P
Sbjct: 73 PEPPLFTSTHSWEDIPEQNVCLTKPDLSPPERVQEAVSCLPASLESTLAGSPP 125
>07_01_0248 -
1821340-1821996,1823619-1823761,1824239-1824453,
1825911-1826049,1826152-1826385,1826504-1826624
Length = 502
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +2
Query: 386 ALAHLLKASLGSGVLAMPLAFKNAGLLVG 472
A AH++ A +GSGVL++ A G ++G
Sbjct: 46 ASAHIITAVIGSGVLSLAWAIAQLGWVIG 74
>06_01_0874 -
6702059-6702733,6703146-6703521,6703677-6703770,
6705455-6705833
Length = 507
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 317 REDMGPYVPANHRPMESNTSSFGALAHLLKASLGSGVLAMPLAFKNAGLLVG 472
R + P R E + + + A AH++ +GS VLA+ F G + G
Sbjct: 28 RSSLSPAREKTRRRPEKSGTVWTATAHIVALLIGSSVLAVAWTFAQLGWVAG 79
>02_01_0018 + 119890-120238,120331-120424,120518-121529
Length = 484
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +2
Query: 386 ALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVKTSQQLCVEVKK 565
A +H++ A +GSGVL++ A G +VG +L + ++L C
Sbjct: 44 AASHIITAVIGSGVLSLAWAIAQLGWVVGPTVMLLFAAVIYFTSNLLAD-----CYRTGD 98
Query: 566 PALG 577
PA G
Sbjct: 99 PATG 102
>11_06_0736 - 26784531-26785814
Length = 427
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +1
Query: 343 SKPSTYGVKHLEFRCLGPFTESIPRFWCTGYAVGLQKRWSPRRLHRNYAY 492
+KP + G+ + EF+C GP +++ R G+A+ L + + + +Y Y
Sbjct: 372 AKPESSGIYYGEFKCTGPGSDAKKR---VGWALDLTEEQAKPFIGTHYIY 418
>11_01_0597 + 4769748-4770166,4770263-4770545,4770725-4771360
Length = 445
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 386 ALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVK 532
A AH++ A +GSGVL++ A G + G +L + + +L +
Sbjct: 36 ASAHIITAVIGSGVLSLAWAIAQLGWVAGPAVMLLFAFVIYYTSTLLAE 84
>04_04_0338 +
24509698-24510042,24510373-24510490,24510539-24510642,
24510823-24511491
Length = 411
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 338 VPANHRPMESNTSSFGALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLI 502
V + P + T + A AH++ A +GSGVL++ G + G +L G +
Sbjct: 24 VDGDGEPRRTGTM-WTASAHIITAVIGSGVLSLAWGVAQLGWVAGPAVMLLFGAV 77
>02_05_0565 +
30010395-30010485,30011604-30011678,30011913-30012138,
30014432-30014649,30015170-30015303,30015424-30015675,
30016009-30016416
Length = 467
Score = 28.3 bits (60), Expect = 6.4
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = +2
Query: 254 PIQLVMDDNYSSKIE--LAYNGSREDMGPYVPANHRPMESNT---SSFGALAHLLKASLG 418
P+ + ++ SS+I+ AY P++ A HR E++ +++ A AH++ A +G
Sbjct: 13 PLLEKLSNSSSSEIDKRTAYQVMSSRPTPHMLA-HRTRETDQLEGTAWTATAHIITAVIG 71
Query: 419 SGVLAMPLAFKNAGLLVG 472
SGVL++ + G + G
Sbjct: 72 SGVLSLAWSVAQLGWVGG 89
>01_06_1540 -
38111557-38111985,38112087-38112311,38112494-38112854,
38112965-38113058,38113136-38113369,38113891-38113945
Length = 465
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 386 ALAHLLKASLGSGVLAMPLAFKNAGLLVGCIGTMLIGLIC 505
A AH++ A +GSGVLA+ + G + G + L G C
Sbjct: 24 ATAHIVTAVIGSGVLALAWSVAQLGWVAGPLA--LAGFAC 61
>10_02_0156 +
5946160-5946423,5946558-5947063,5947430-5947486,
5947664-5947902,5948200-5948318,5948400-5948486,
5951757-5951816
Length = 443
Score = 27.9 bits (59), Expect = 8.4
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +2
Query: 410 SLGSGVLA-MPLAFKNAGLL-VGCIGTMLIGLICGHVIHILVKTSQQLCVEVKKPALGYA 583
+LG+ LA +P+AF A + +G +G + G++CG V+ +L+ + LC K AL
Sbjct: 371 NLGAYYLAGIPVAFFFAFVCHLGGMG-LWFGILCGLVVQMLLLLTITLCTNWDKEALKAK 429
Query: 584 D 586
D
Sbjct: 430 D 430
>05_06_0075 - 25379820-25380776,25380851-25381179,25381255-25381453
Length = 494
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -3
Query: 417 PRDAFSKWAKAPKLEVFDSIGRWFAGTYGPMSSRDPL 307
PRD + K P D GRW A T G +DP+
Sbjct: 86 PRDRKYRNGKRPSRSTEDKAGRWKAST-GKTEGKDPI 121
>05_05_0202 -
23211342-23211385,23211493-23211579,23211666-23211779,
23211886-23212111,23212222-23212401,23212511-23212654,
23212818-23212979,23213093-23213296,23214109-23214156,
23214601-23214846
Length = 484
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -3
Query: 477 MQPTRRPAFLKANGIASTPEPRDAFSKWAKAPKLEVFD 364
+ P R + L A A+ P P +AF A APK+ FD
Sbjct: 15 LAPVRAQSSLSAAAAAAAPAPENAF---AAAPKMPPFD 49
>03_01_0285 + 2205165-2206781
Length = 538
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +1
Query: 19 MHVLAGKVAIL---KQSNFECNFVALVFSFFMCCD 114
MH L V L Q NF+C F F FF+ CD
Sbjct: 61 MHRLLDGVTFLLATSQLNFQCRFWLAGFRFFVTCD 95
>02_05_0213 +
26815889-26816475,26817718-26817788,26817985-26818073,
26818910-26818991,26819089-26819204,26819290-26819451,
26819531-26819680,26819969-26820037,26820375-26820491
Length = 480
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 476 IGTMLIGLICGHVIHILVKTSQQLCVEVKKPALGYAD 586
+ +L+GL+ G V+ IL + +L V +PA AD
Sbjct: 80 VSPLLVGLVAGLVLDILFVGAAKLIVRRPRPAYNAAD 116
>02_04_0003 +
18832467-18832543,18832627-18832849,18832985-18833375,
18833766-18834223,18834320-18834607,18834679-18835398
Length = 718
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 410 SLGSGVLAMPLAFKNAGLLVGCIGTMLIGLICGHVIHILVK 532
S GS V + + L GC +G+IC H+I +LV+
Sbjct: 443 SWGSKVFEVHVNMTEQELSCGCKLFEHLGIICSHIIRVLVQ 483
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,717,026
Number of Sequences: 37544
Number of extensions: 490931
Number of successful extensions: 1309
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1309
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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