Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0705
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.0  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.0  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.0  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.0  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    24   1.0  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   1.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   1.8  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   3.2  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   4.2  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   5.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.4  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   7.4  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   9.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   9.8  

>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 276 KPFSNEGKPLVVQFTVKHEQDID 344
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 276 KPFSNEGKPLVVQFTVKHEQDID 344
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 276 KPFSNEGKPLVVQFTVKHEQDID 344
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 276 KPFSNEGKPLVVQFTVKHEQDID 344
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 276 KPFSNEGKPLVVQFTVKHEQDID 344
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +3

Query: 168 FGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSR 269
           FGK   T   FFSD + D  +    D   Y L R
Sbjct: 203 FGKINRTMRSFFSDNKQDDKIPQISD-NLYILCR 235


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = +3

Query: 168 FGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSR 269
           FGK   T   FFSD + D  +    D   Y L R
Sbjct: 203 FGKINRTMRSFFSDNKQDDKIPQISD-NLYILCR 235


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = -2

Query: 368 DLEVSASTVNVLFMFDSELDYQGFTLITERFELTGESIEPRIFRGFQTFV 219
           DLE   +++  L      LD Q   +  E  +L GE+I    + GF T +
Sbjct: 212 DLEAIYASLKNLNTDHGFLDGQKPFIFQEVIDLGGEAISKHEYTGFGTVI 261


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -2

Query: 368 DLEVSASTVNVLFMFDSELDYQGFTLITERFELTGESIEPRIFRGFQTFV 219
           DLE    ++  L      LD Q   +  E  +L GE+I    + GF T +
Sbjct: 213 DLEAIYGSLKNLNTDHGFLDGQKPFIFQEVIDLGGEAISKHEYTGFGTVI 262


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 132 FPTNHQETSPQRIH 91
           FP NH    P+++H
Sbjct: 41  FPLNHLNEEPEKLH 54


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 592  DNEKVESGDLEADWDFLSPKKIKDPEAKKPE 684
            D+E V +       D ++P  I+DP+ +K E
Sbjct: 1194 DSETVSTVPQNKRDDLVNPYWIEDPDVRKGE 1224


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 592  DNEKVESGDLEADWDFLSPKKIKDPEAKKPE 684
            D+E V +       D ++P  I+DP+ +K E
Sbjct: 1194 DSETVSTVPQNKRDDLVNPYWIEDPDVRKGE 1224


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 592  DNEKVESGDLEADWDFLSPKKIKDPEAKKPE 684
            D+E V +       D ++P  I+DP+ +K E
Sbjct: 1194 DSETVSTVPQNKRDDLVNPYWIEDPDVRKGE 1224


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 592  DNEKVESGDLEADWDFLSPKKIKDPEAKKPE 684
            D+E V +       D ++P  I+DP+ +K E
Sbjct: 1194 DSETVSTVPQNKRDDLVNPYWIEDPDVRKGE 1224


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -1

Query: 219 HPLGR*RTFQQSI*TFQILFLGAHCTPNCFPTN 121
           +P+G       S+  F ++FL   CT  C   N
Sbjct: 133 YPVGIVGVKNASLFIFDLIFLSFRCTKLCKEAN 165


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -2

Query: 137 IAFPRIIRKLLLKEYITIYRR*CQQADNDQYNSFHFRF 24
           I  P I+RK+L+K++     R     ++    +FH  F
Sbjct: 79  IRSPEILRKVLVKDFDKFTNRNIATNESADPLAFHTLF 116


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 358 YPPPQSMSCSCLTVNWTTKGLP 293
           YPPP S+    ++V   T G P
Sbjct: 213 YPPPGSLGSMGVSVPCGTSGNP 234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,299
Number of Sequences: 336
Number of extensions: 4429
Number of successful extensions: 20
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)