Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0705
(705 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 176 2e-44
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 165 3e-41
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 164 7e-41
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 159 2e-39
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 86 3e-17
03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026 74 1e-13
06_03_1514 + 30696632-30696724,30696857-30697009,30697226-306973... 29 3.6
01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,437... 29 4.8
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 28 6.3
09_02_0286 - 6898041-6898144,6898881-6899005,6899158-6899207,689... 28 6.3
06_03_1275 + 28903961-28904123,28904225-28904322,28904406-289045... 28 6.3
05_01_0421 + 3308692-3309070,3309199-3309339,3309776-3309897,331... 28 8.3
04_03_0741 + 19187333-19188868,19189264-19189490,19189578-191898... 28 8.3
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 176 bits (428), Expect = 2e-44
Identities = 84/147 (57%), Positives = 107/147 (72%), Gaps = 2/147 (1%)
Frame = +3
Query: 90 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL 263
+VFF+EKF +D WES WV SE E G++ T+GK+ DPED KG++TSED RFYA+
Sbjct: 30 EVFFQEKF-EDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPED-KGIQTSEDYRFYAI 87
Query: 264 SRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDIC 443
S ++ FSN+ K LV+QF+VKHEQ +DCGGGY+K+ ++QK G+TPY IMFGPDIC
Sbjct: 88 SAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFGPDIC 147
Query: 444 GPGTKKVHVIFSYKGKNHLIKKRYPLQ 524
G TKKVH IF+ KNHLIKK P +
Sbjct: 148 GYSTKKVHTIFTKNDKNHLIKKDVPCE 174
Score = 97.9 bits (233), Expect = 7e-21
Identities = 40/65 (61%), Positives = 50/65 (76%)
Frame = +1
Query: 505 KKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLSPKKIKDPEAKKPE 684
KKD+ C+ D +H+YTLI+ PD TY +LIDN + +SG + WD L PK+IKDPEAKKPE
Sbjct: 168 KKDVPCETDQLSHVYTLIIHPDATYTILIDNVEKQSGSIYEHWDILPPKQIKDPEAKKPE 227
Query: 685 DWDDK 699
DWDDK
Sbjct: 228 DWDDK 232
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +1
Query: 646 PKKIKDPEAKKPEDWDDK 699
PK+I DP+AKKPEDWDD+
Sbjct: 250 PKEIPDPDAKKPEDWDDE 267
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 165 bits (401), Expect = 3e-41
Identities = 76/142 (53%), Positives = 104/142 (73%), Gaps = 2/142 (1%)
Frame = +3
Query: 90 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL 263
+V FEE+F +D WES WV S+ E G FK TAG++ DP DDKG++T+ DAR +A+
Sbjct: 28 EVIFEERF-EDGWESRWVKSDWKRSEGKAGTFKHTAGRYSGDP-DDKGIQTTLDARHFAI 85
Query: 264 SRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDIC 443
S K FSN+G+ LV+Q+++K EQDI+CGGGY+K+ + QK G+TPY +MFGPDIC
Sbjct: 86 SAKIPEFSNKGRTLVLQYSIKFEQDIECGGGYIKLMSGYVNQKKFSGDTPYSLMFGPDIC 145
Query: 444 GPGTKKVHVIFSYKGKNHLIKK 509
G TKK+H+I SY+G+N+ IKK
Sbjct: 146 GTQTKKLHLILSYQGQNYPIKK 167
Score = 94.3 bits (224), Expect = 8e-20
Identities = 36/65 (55%), Positives = 50/65 (76%)
Frame = +1
Query: 505 KKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLSPKKIKDPEAKKPE 684
KKD++C+ D TH+YT I++PD +Y +L+DN + ESG + DWD L P+KIKD AKKP+
Sbjct: 166 KKDLQCETDKLTHVYTFILRPDASYSILVDNRERESGSMYTDWDILPPRKIKDVHAKKPK 225
Query: 685 DWDDK 699
DWDD+
Sbjct: 226 DWDDR 230
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 592 DNEKVESGDLEADWDFLS-PKKIKDPEAKKPEDWDD 696
D E +E D + S PK+I DP+ KKP+ WDD
Sbjct: 229 DREYIEDPDAVKPEGYDSIPKEIPDPKDKKPDTWDD 264
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 164 bits (398), Expect = 7e-41
Identities = 81/155 (52%), Positives = 103/155 (66%), Gaps = 12/155 (7%)
Frame = +3
Query: 90 DVFFEEKFPDDSWESNWVYSE--HPGKEFGKFKLTAGKFFSDPEDD----------KGLK 233
+VFF+EKF DD WE WV SE G++ T+GK++ D +D G++
Sbjct: 26 EVFFQEKF-DDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGDADDKGMCEVTLLLCAGIQ 84
Query: 234 TSEDARFYALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETP 413
TSED RFYA+S K+ FS++ K LV+QF+VKHEQ +DCGGGY+K+ ++QK GETP
Sbjct: 85 TSEDYRFYAISAKYPEFSSKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGETP 144
Query: 414 YEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKRYP 518
Y IMFGPDICG TKKVH I + GKNHLIKK P
Sbjct: 145 YSIMFGPDICGYATKKVHAILTKNGKNHLIKKDVP 179
Score = 92.7 bits (220), Expect = 3e-19
Identities = 36/64 (56%), Positives = 48/64 (75%)
Frame = +1
Query: 505 KKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLSPKKIKDPEAKKPE 684
KKD+ CK D TH+YTLI++PD Y +LIDN + ++G + DW+ + PK +DPEAKKPE
Sbjct: 175 KKDVPCKTDQLTHVYTLIIRPDAKYSILIDNTEKQTGSIYDDWNIIPPKNKRDPEAKKPE 234
Query: 685 DWDD 696
DWDD
Sbjct: 235 DWDD 238
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1
Query: 646 PKKIKDPEAKKPEDWDDK 699
PK+I DPEA KPEDWDD+
Sbjct: 257 PKEITDPEATKPEDWDDE 274
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 159 bits (386), Expect = 2e-39
Identities = 74/145 (51%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Frame = +3
Query: 81 INCDVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARF 254
++ +V FEE+F DD W S WV S+ E G FK TAG + DP DD+G++T+ DA+
Sbjct: 25 VSGEVIFEERF-DDDWGSRWVKSDWKKSEGKAGTFKHTAGSYSGDP-DDRGIQTTSDAKH 82
Query: 255 YALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGP 434
+A+S KF FSN+ + LVVQ+++K EQDI+CGG Y+K+ + QK G+TPY MFGP
Sbjct: 83 FAISAKFPEFSNKNRTLVVQYSIKIEQDIECGGAYIKLMSGYVNQKKFGGDTPYSFMFGP 142
Query: 435 DICGPGTKKVHVIFSYKGKNHLIKK 509
DICG TKK+H+I SY+G+N+ IKK
Sbjct: 143 DICGDQTKKLHLILSYQGQNYPIKK 167
Score = 89.8 bits (213), Expect = 2e-18
Identities = 34/65 (52%), Positives = 48/65 (73%)
Frame = +1
Query: 505 KKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLSPKKIKDPEAKKPE 684
KKD++C+ D TH YT I++PD +Y +L+DN + E G + DWD L P+KIK+ AKKP+
Sbjct: 166 KKDLKCETDKLTHFYTFILRPDASYSLLVDNREREFGSMYTDWDILPPRKIKESNAKKPK 225
Query: 685 DWDDK 699
DWDD+
Sbjct: 226 DWDDR 230
Score = 34.3 bits (75), Expect = 0.096
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 592 DNEKVESGDLEADWDFLS-PKKIKDPEAKKPEDWDD 696
D E +E D + S PK+I DP+ KKPE WDD
Sbjct: 229 DREYIEDPDEVKPEGYDSIPKEIPDPKDKKPESWDD 264
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 85.8 bits (203), Expect = 3e-17
Identities = 55/136 (40%), Positives = 75/136 (55%), Gaps = 4/136 (2%)
Frame = +3
Query: 90 DVFFEEKFPDDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSR 269
D F E F D+S+E WV S GK+ K K SD +D GL SE A+ YA+ +
Sbjct: 24 DPLFYEPF-DESFEGRWVLS---GKDDYKGVWKHEK--SDGHEDYGLLVSEKAKKYAIIK 77
Query: 270 KF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMFGPD 437
+ +P + + +V+QF V+ + ++CGG YLK D + K+ ETPY IMFGPD
Sbjct: 78 ELDEPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDNETPYTIMFGPD 137
Query: 438 ICGPGTKKVHVIFSYK 485
CG T KVH I +K
Sbjct: 138 KCG-STNKVHFILKHK 152
Score = 56.8 bits (131), Expect = 2e-08
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 5/62 (8%)
Frame = +1
Query: 529 DVYTHLYTLIVKPDNTYEVLID-NEKVESGDLEADWDF---LSPKK-IKDPEAKKPEDWD 693
D +H+YT I+KPDN +L+D EK ++ L AD DF L P K I DP+ KKPEDWD
Sbjct: 173 DKLSHVYTAILKPDNEVRILVDGEEKKKANFLSAD-DFEPSLIPSKTIPDPDDKKPEDWD 231
Query: 694 DK 699
++
Sbjct: 232 ER 233
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +1
Query: 559 VKPDNTYEVLIDNEKVESGDLEADWDFLSPKKIKDPEAKKPEDWDDK 699
VKPD+ E + E W P++I DPEA KPEDWDD+
Sbjct: 242 VKPDDWDEDAPMEIEDEEATKPEGWLDDEPEEIDDPEANKPEDWDDE 288
>03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026
Length = 585
Score = 74.1 bits (174), Expect = 1e-13
Identities = 32/58 (55%), Positives = 41/58 (70%)
Frame = +1
Query: 505 KKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLSPKKIKDPEAKK 678
KKD+ C+ D TH+YTLI++PD Y +LIDN + +G + D D L PKK KDPEAKK
Sbjct: 521 KKDVPCETDQLTHVYTLIIRPDAKYSILIDNTEKRTGSIYGDCDNLPPKKKKDPEAKK 578
>06_03_1514 +
30696632-30696724,30696857-30697009,30697226-30697309,
30697451-30697569,30697769-30697870,30699071-30699190,
30699285-30699350,30699563-30699629,30699720-30699773,
30700379-30700534,30701130-30701228
Length = 370
Score = 29.1 bits (62), Expect = 3.6
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Frame = -2
Query: 503 DEMVLTLVTEDYVYLLGSRTTNVRAEHNLIWS-LSVHVLLLQ-----FAVKDLEVSASTV 342
D M + ++Y +L NV HNL WS ++H+L FA + L +
Sbjct: 105 DIMARKFLNQNYTVMLFHYDGNVDGWHNLEWSDKAIHILARNQTKWWFAKRFLHPDVVAI 164
Query: 341 -NVLFMFDSELDYQGF-------TLITERFELTGESIEP 249
+F++D +L F +++E E+T +++P
Sbjct: 165 YGFIFLWDEDLGVDNFDPRRYLDIMVSEGLEITQPALDP 203
>01_01_0588 +
4372877-4372949,4374328-4376262,4376940-4377015,
4378900-4378970,4379038-4379144,4379241-4379711,
4379791-4379976,4380132-4380425,4380820-4381434,
4382219-4382615,4382768-4382850,4383397-4383567,
4384046-4384243,4384754-4385314,4385401-4385460,
4385553-4385869,4385980-4386403,4386539-4387006,
4387093-4387209,4387306-4387427,4387506-4388247,
4388453-4388485,4388625-4388879,4388975-4389160,
4390115-4390453,4391293-4392045
Length = 3017
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 586 LIDNEKVESGDLEADWDFLSPKKIKDPE 669
L DN K+++GDL +W P + PE
Sbjct: 107 LTDNSKLDTGDLHGEWKEWRPTQCSVPE 134
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = -3
Query: 439 MSGPNIISYGVSPCMSFCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGL 296
M GP ++ ++P S +Q + +++ +SC+CL T+KGL
Sbjct: 674 MLGPTVLV--LAPTRELASQIQDEAVKFGRSSRVSCTCL-YGGTSKGL 718
>09_02_0286 -
6898041-6898144,6898881-6899005,6899158-6899207,
6899245-6899386,6899951-6900020,6900077-6900216,
6900291-6900365,6901083-6904723
Length = 1448
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = -3
Query: 346 QSMSCSCLTVNWTTKGLPSLLNGLNLRERA*NLASSEVFKPLSSSGSLKNFPAVNLNFPN 167
+S+ L+ N + G+P L GLN +++++ + P+ SSG L FP + N
Sbjct: 738 KSIGALDLSNNQLSGGIPPGLGGLNFLADF-DVSNNNLTGPIPSSGQLTTFPPSRYDNNN 796
Query: 166 SFPGCSL 146
G L
Sbjct: 797 GLCGIPL 803
>06_03_1275 +
28903961-28904123,28904225-28904322,28904406-28904550,
28904690-28904814,28904957-28905049,28905297-28905362,
28905459-28905524,28905790-28905870,28905947-28906123,
28906212-28906287,28906394-28906521,28906639-28906950
Length = 509
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -1
Query: 126 TNHQETSPQRIHHNLSKIMPA-S*QRPVQQLSFSIHS 19
TNH E P+ H LSKI+ A S RP+ +S+ +H+
Sbjct: 41 TNHVERPPKERH--LSKIIAAASGARPLADVSYCVHA 75
>05_01_0421 +
3308692-3309070,3309199-3309339,3309776-3309897,
3310369-3310632,3310719-3310849,3311254-3311461,
3311564-3311632,3311722-3311799,3312448-3312621
Length = 521
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -3
Query: 124 ESSGNFSSKNTSQFIEDNASKLTTTSTTA 38
ES+G SSK + E++ + TTTSTTA
Sbjct: 59 ESAGVSSSKKKRRIEEESPAATTTTSTTA 87
>04_03_0741 +
19187333-19188868,19189264-19189490,19189578-19189899,
19190311-19190399,19190882-19191128,19191756-19191884,
19191967-19192182,19192256-19192379,19192857-19193095
Length = 1042
Score = 27.9 bits (59), Expect = 8.3
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Frame = -2
Query: 458 LGSRTTNVRAEHNLIWSLSVHVL---LLQFAVKDLEV--SASTVNVLFMFDSEL-DY-QG 300
LGS T N+ A+H+ S H+ L +FAV E+ S N L +++++ D+ G
Sbjct: 701 LGSSTANLSADHDTSNLSSPHIAASSLSEFAVLGFELGYSMENPNSLVLWEAQFGDFSNG 760
Query: 299 FTLITERFELTGES 258
+I ++F +GE+
Sbjct: 761 AQVIFDQFLSSGEA 774
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,832,034
Number of Sequences: 37544
Number of extensions: 441881
Number of successful extensions: 1254
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1242
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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