Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0705
(705 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to calr... 170 7e-43
At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to SP|Q... 168 3e-42
At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to simi... 154 5e-38
At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to simi... 109 2e-24
At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin... 75 6e-14
At5g07340.1 68418.m00838 calnexin, putative identical to calnexi... 67 9e-12
At5g56820.1 68418.m07090 F-box family protein contains F-box dom... 33 0.14
At3g14670.1 68416.m01856 hypothetical protein 31 0.74
At1g74170.1 68414.m08590 leucine-rich repeat family protein cont... 31 0.74
At1g74190.1 68414.m08592 leucine-rich repeat family protein cont... 30 1.3
At2g15695.1 68415.m01797 expressed protein contains Pfam PF05705... 30 1.7
At3g27740.1 68416.m03463 carbamoyl-phosphate synthase [glutamine... 29 3.0
At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kina... 29 3.0
At3g31540.1 68416.m04025 hypothetical protein 29 4.0
At3g02885.1 68416.m00283 gibberellin-regulated protein 5 (GASA5)... 29 4.0
At2g37070.1 68415.m04549 expressed protein 27 9.2
At2g28340.1 68415.m03444 zinc finger (GATA type) family protein ... 27 9.2
>At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to
calreticulin (crt1) GI:2052379 [Arabidopsis thaliana]
Length = 425
Score = 170 bits (414), Expect = 7e-43
Identities = 80/150 (53%), Positives = 104/150 (69%), Gaps = 2/150 (1%)
Frame = +3
Query: 81 INCDVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARF 254
++ +V FEEKF +D WE WV S+ + G++K TAG + D +DKG++TSED RF
Sbjct: 20 VSAEVIFEEKF-EDGWEKRWVKSDWKKDDNTAGEWKHTAGNWSGDA-NDKGIQTSEDYRF 77
Query: 255 YALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGP 434
YA+S +F FSN+ K LV QF+VKHEQ +DCGGGY+K+ ++Q G+TPY IMFGP
Sbjct: 78 YAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSDDVDQTKFGGDTPYSIMFGP 137
Query: 435 DICGPGTKKVHVIFSYKGKNHLIKKRYPLQ 524
DICG TKKVH I +Y G NHLIKK P +
Sbjct: 138 DICGYSTKKVHAILTYNGTNHLIKKEVPCE 167
Score = 96.3 bits (229), Expect = 2e-20
Identities = 38/65 (58%), Positives = 50/65 (76%)
Frame = +1
Query: 505 KKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLSPKKIKDPEAKKPE 684
KK++ C+ D TH+YT +++PD TY +LIDN + ++G L +DWD L KKIKDP AKKPE
Sbjct: 161 KKEVPCETDQLTHVYTFVLRPDATYSILIDNVEKQTGSLYSDWDLLPAKKIKDPSAKKPE 220
Query: 685 DWDDK 699
DWDDK
Sbjct: 221 DWDDK 225
Score = 35.9 bits (79), Expect = 0.026
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +1
Query: 646 PKKIKDPEAKKPEDWDDK 699
PK+I D +AKKPEDWDD+
Sbjct: 243 PKEIPDTDAKKPEDWDDE 260
>At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to
SP|Q38858 Calreticulin 2 precursor {Arabidopsis
thaliana}
Length = 424
Score = 168 bits (409), Expect = 3e-42
Identities = 81/146 (55%), Positives = 102/146 (69%), Gaps = 2/146 (1%)
Frame = +3
Query: 93 VFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYALS 266
V FEE+F DD WE+ WV SE + G++K TAG + D +DKG++TSED RFYA+S
Sbjct: 24 VIFEERF-DDGWENRWVKSEWKKDDNTAGEWKHTAGNWSGDA-NDKGIQTSEDYRFYAIS 81
Query: 267 RKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDICG 446
+F FSN+ K LV QF+VKHEQ +DCGGGY+K+ ++QK G+TPY IMFGPDICG
Sbjct: 82 AEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICG 141
Query: 447 PGTKKVHVIFSYKGKNHLIKKRYPLQ 524
TKKVH I +Y NHLIKK P +
Sbjct: 142 YSTKKVHAILTYNEANHLIKKDVPCE 167
Score = 98.3 bits (234), Expect = 4e-21
Identities = 39/65 (60%), Positives = 51/65 (78%)
Frame = +1
Query: 505 KKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLSPKKIKDPEAKKPE 684
KKD+ C+ D TH+YT I++PD TY +LIDN + ++G L +DWD L PKKIKDP AKKPE
Sbjct: 161 KKDVPCETDQLTHVYTFILRPDATYSILIDNVEKQTGSLYSDWDLLPPKKIKDPSAKKPE 220
Query: 685 DWDDK 699
DWD++
Sbjct: 221 DWDEQ 225
>At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 424
Score = 154 bits (374), Expect = 5e-38
Identities = 74/142 (52%), Positives = 99/142 (69%), Gaps = 2/142 (1%)
Frame = +3
Query: 90 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL 263
++F EE F + W+S WV S+ E G FK TAGK+ DP D+KG++T DA+ YA+
Sbjct: 29 EIFLEEHF-EGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDP-DNKGIQTYNDAKHYAI 86
Query: 264 SRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDIC 443
S K FSN+ + LVVQ++VK EQDI+CGG Y+K+ + QK G+TPY +MFGPDIC
Sbjct: 87 SAKIPEFSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSLMFGPDIC 146
Query: 444 GPGTKKVHVIFSYKGKNHLIKK 509
G TKK+HVI SY+G+N+ IKK
Sbjct: 147 GTQTKKLHVIVSYQGQNYPIKK 168
Score = 88.6 bits (210), Expect = 4e-18
Identities = 35/65 (53%), Positives = 47/65 (72%)
Frame = +1
Query: 505 KKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLSPKKIKDPEAKKPE 684
KKD++C+ D H YT I++PD +Y VL+DN++ E G + DWD L P+KIK AKKPE
Sbjct: 167 KKDLQCETDKLNHFYTFILRPDASYSVLVDNKEREFGSMYTDWDILPPRKIKVKNAKKPE 226
Query: 685 DWDDK 699
DWDD+
Sbjct: 227 DWDDR 231
>At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 370
Score = 109 bits (262), Expect = 2e-24
Identities = 53/114 (46%), Positives = 75/114 (65%), Gaps = 2/114 (1%)
Frame = +3
Query: 90 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL 263
++F EE F + W+S WV S+ E G FK TAGK+ DP D+KG++T DA+ YA+
Sbjct: 29 EIFLEEHF-EGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDP-DNKGIQTYNDAKHYAI 86
Query: 264 SRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIM 425
S K FSN+ + LVVQ++VK EQDI+CGG Y+K+ + QK G+TPY ++
Sbjct: 87 SAKIPEFSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSVL 140
Score = 62.5 bits (145), Expect = 3e-10
Identities = 25/44 (56%), Positives = 31/44 (70%)
Frame = +1
Query: 568 DNTYEVLIDNEKVESGDLEADWDFLSPKKIKDPEAKKPEDWDDK 699
D Y VL+DN++ E G + DWD L P+KIK AKKPEDWDD+
Sbjct: 134 DTPYSVLVDNKEREFGSMYTDWDILPPRKIKVKNAKKPEDWDDR 177
Score = 30.7 bits (66), Expect = 0.98
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +1
Query: 646 PKKIKDPEAKKPEDWDDK 699
P++I D +AK+PEDWD++
Sbjct: 195 PREIPDRKAKEPEDWDEE 212
>At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin
homolog 1, Arabidopsis thaliana, EMBL:AT08315
[SP|P29402]
Length = 530
Score = 74.5 bits (175), Expect = 6e-14
Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 4/127 (3%)
Frame = +3
Query: 117 DDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKF-KPFSNE 293
D+ ++ W+ S++ E G +K S+ +D GL SE AR Y + ++ +P + +
Sbjct: 36 DEPFDGRWIVSKNSDYE-GVWKHAK----SEGHEDYGLLVSEKARKYGIVKELDEPLNLK 90
Query: 294 GKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMFGPDICGPGTKKV 464
+V+Q+ V+ ++ ++CGG YLK + + E+PY IMFGPD CG GT KV
Sbjct: 91 EGTVVLQYEVRFQEGLECGGAYLKYLRPQEAGWTPQGFDSESPYSIMFGPDKCG-GTNKV 149
Query: 465 HVIFSYK 485
H I +K
Sbjct: 150 HFILKHK 156
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Frame = +1
Query: 529 DVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDF----LSPKKIKDPEAKKPEDWDD 696
D +H+YT I+KPDN +L+D E+ + +L + DF + K I DPE KKPEDWD+
Sbjct: 177 DKLSHVYTAILKPDNEVRILVDGEEKKKANLLSGEDFEPALIPAKTIPDPEDKKPEDWDE 236
Query: 697 K 699
+
Sbjct: 237 R 237
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +1
Query: 559 VKPDNTYEVLIDNEKVESGDLEADWDFLSPKKIKDPEAKKPEDWDDK 699
VKP++ E + E + W P+++ DPEA KPEDWDD+
Sbjct: 246 VKPEDWDEDAPMEIEDEEAEKPEGWLDDEPEEVDDPEATKPEDWDDE 292
>At5g07340.1 68418.m00838 calnexin, putative identical to calnexin
homolog 2 from Arabidopsis thaliana [SP|Q38798], strong
similarity to calnexin homolog 1, Arabidopsis thaliana,
EMBL:AT08315 [SP|P29402]; contains Pfam profile PF00262
calreticulin family
Length = 532
Score = 67.3 bits (157), Expect = 9e-12
Identities = 44/130 (33%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Frame = +3
Query: 117 DDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKF---KPFS 287
D+ ++ WV SE + G +K S+ DD GL SE A+ Y + ++ +P +
Sbjct: 36 DEPFDGRWVVSEKAEYQ-GVWKHEK----SEGHDDYGLLVSEKAKKYGIVKELDVDEPLN 90
Query: 288 -NEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMFGPDICGPGT 455
NEG +V+Q+ + ++ ++CGG YLK + + ++PY IMFGPD CG T
Sbjct: 91 LNEGT-VVLQYEARFQEGLECGGAYLKYLRPQEAGWVPQGFDNDSPYSIMFGPDKCG-AT 148
Query: 456 KKVHVIFSYK 485
KVH I +K
Sbjct: 149 NKVHFILKHK 158
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 4/61 (6%)
Frame = +1
Query: 529 DVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLSP----KKIKDPEAKKPEDWDD 696
D+ +H+YT ++K DN +L+D E+ + G+L + DF P K I DPE KKPEDWD+
Sbjct: 179 DMLSHVYTAVLKSDNEVRILVDGEEKKKGNLLSAEDFEPPLIPSKTIPDPEDKKPEDWDE 238
Query: 697 K 699
+
Sbjct: 239 R 239
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +1
Query: 559 VKPDNTYEVLIDNEKVESGDLEADWDFLSPKKIKDPEAKKPEDWDDK 699
VKPD+ E + E + W P +++DPEA KPEDWDD+
Sbjct: 248 VKPDDWDEDAPMEIEDEEAEKPEGWLDDEPVEVEDPEASKPEDWDDE 294
>At5g56820.1 68418.m07090 F-box family protein contains F-box domain
Pfam:PF00646
Length = 435
Score = 33.5 bits (73), Expect = 0.14
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Frame = -3
Query: 286 LNG---LNLRERA*NLASSEVF-KPLSSSGSLKNFPAVNLNFPNSFPGC-SLYTQLLSHE 122
LNG L+L + + NL + ++ KPL S +K+ P +++ PNS P C + + + L +
Sbjct: 305 LNGDRILSLLKHSPNLQTLKLNEKPLRS---IKDQPNISVRKPNSVPECLTFHLETLEWQ 361
Query: 121 S-SGNFSSKNTSQFIEDNASKLTTTSTTAFIFDSQYHFFNK 2
+G K + +I NA +L T + + + S++ K
Sbjct: 362 GYAGRPEDKEIAVYILGNALRLNTATISRYFSSSRFRHHQK 402
>At3g14670.1 68416.m01856 hypothetical protein
Length = 232
Score = 31.1 bits (67), Expect = 0.74
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 601 KVESGDLEADWDFLSPKKIKDPEAKKPEDWDDK 699
K + GDLE D D K KDP+ K P++ D K
Sbjct: 169 KEKDGDLEKDGDQEKDPKEKDPKEKDPKEKDPK 201
>At1g74170.1 68414.m08590 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 1068
Score = 31.1 bits (67), Expect = 0.74
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 309 VQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEI 422
++F KH D GG +F L + ++ GE P E+
Sbjct: 830 IEFATKHRYDAYMGGNLKLLFGMDLSENELSGEIPVEL 867
>At1g74190.1 68414.m08592 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.1
[Lycopersicon pimpinellifolium] gi|1184075|gb|AAC15779
Length = 965
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 309 VQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYE 419
++F KH D GG +F L + ++ GE P E
Sbjct: 762 IEFATKHRYDAYMGGNLKLLFGMDLSENELSGEIPVE 798
>At2g15695.1 68415.m01797 expressed protein contains Pfam PF05705:
Eukaryotic protein of unknown function (DUF829)
Length = 420
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 397 MSFCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGLPSLLNGLNL 269
+ F S L K +P + MS V+W KG+ S L+GL L
Sbjct: 147 LDFTSDLNVKFALHPTIRRMSGPSRLVSWVAKGISSGLDGLYL 189
>At3g27740.1 68416.m03463 carbamoyl-phosphate synthase
[glutamine-hydrolyzing] (CARA) / glutamine-dependent
carbamoyl-phosphate synthase small subunit identical to
carbamoyl phosphate synthetase small subunit GI:2462781
[Arabidopsis thaliana]
Length = 430
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +1
Query: 505 KKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGD----LEADWDFLSPKKIKDPEA 672
++DI D+ T T ++ D + ++ E+ ++ D + WD + I D
Sbjct: 157 ERDIMGVYDLDTRAITRRLREDGSLIGVLSTEQSKTDDELLQMSRSWDIVGIDLISDVSC 216
Query: 673 KKPEDWDDK 699
K P +W DK
Sbjct: 217 KSPYEWVDK 225
>At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to
phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
[Arabidopsis thaliana] GI:3702691; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF02493: MORN repeat
Length = 769
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 136 LLSHESSGNFSSKNTSQFIEDNASKLTTTS 47
LLSH S+ N TS+ + + S+LTTTS
Sbjct: 218 LLSHNSTINIDDLRTSKAVSRSLSELTTTS 247
>At3g31540.1 68416.m04025 hypothetical protein
Length = 699
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +1
Query: 520 CKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLSP 648
CKDD YT + + D E L+ + G L+ FL P
Sbjct: 262 CKDDAYTDYFFFVALEDAVLEDLVGKVLTKWGILDRPIRFLEP 304
>At3g02885.1 68416.m00283 gibberellin-regulated protein 5 (GASA5) /
gibberellin-responsive protein 5 identical to GASA5
[Arabidopsis thaliana] GI:1289320
Length = 97
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Frame = -3
Query: 403 PCMSFCSSLQSKTLRYPP---PQSMSCSCLTVNWTTK 302
PCM FC K L PP +C C NW TK
Sbjct: 55 PCMFFCLKCCKKCLCVPPGTFGNKQTCPCYN-NWKTK 90
>At2g37070.1 68415.m04549 expressed protein
Length = 420
Score = 27.5 bits (58), Expect = 9.2
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Frame = -3
Query: 406 SPCMSFCSSLQSKTLRYPPPQSMSCS----CLTVNWTTKGLPSLLNGLNLRERA*NLAS- 242
+P + F S+L+S S SCS CL+V+ T PS+ + ++++ +AS
Sbjct: 164 TPVVPFKSALRSSVASKNELTS-SCSSIESCLSVSSTASNKPSIHSVKQKKDQSLRIASH 222
Query: 241 SEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASK 62
S +P SS+GS +N L P G + + SS ++SS++ F + +K
Sbjct: 223 SLANRPKSSAGS-RNID--QLKVPPVSAGRTYKFNVSRLSSSVDWSSESPRAFTPNKMAK 279
>At2g28340.1 68415.m03444 zinc finger (GATA type) family protein
and genefinder
Length = 315
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
Frame = +1
Query: 565 PDNTYEVLIDN------EKVESGDLEADWDFLSPKKIKDP 666
PDN + L+D E +E+GD E DWD K + P
Sbjct: 16 PDNFLDNLVDPTNDVSVEDIETGDDEGDWDAKFQKLVPPP 55
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,273,034
Number of Sequences: 28952
Number of extensions: 366863
Number of successful extensions: 1070
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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