Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0703
(765 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 26 0.29
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 26 0.29
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 26 0.29
DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory pro... 25 0.50
DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory pro... 25 0.50
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 24 1.2
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 24 1.2
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 23 3.5
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 22 6.2
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 22 6.2
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 21 8.2
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 26.2 bits (55), Expect = 0.29
Identities = 13/47 (27%), Positives = 18/47 (38%)
Frame = +3
Query: 498 PPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRP 638
PP P + +P N QPPV S+ A++ P P
Sbjct: 95 PPIHHQIRPPILHDTQPMCESLNTQPPVTSSSNILQNLADITPNVTP 141
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 26.2 bits (55), Expect = 0.29
Identities = 13/47 (27%), Positives = 18/47 (38%)
Frame = +3
Query: 498 PPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRP 638
PP P + +P N QPPV S+ A++ P P
Sbjct: 95 PPIHHQIRPPILHDTQPMCESLNTQPPVTSSSNILQNLADITPNVTP 141
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 26.2 bits (55), Expect = 0.29
Identities = 13/47 (27%), Positives = 18/47 (38%)
Frame = +3
Query: 498 PPAPRYYGPAQMTQIRPTTPRWNAQPPVRPSTQAASAYANMQPTYRP 638
PP P + +P N QPPV S+ A++ P P
Sbjct: 95 PPIHHQIRPPILHDTQPMCESLNTQPPVTSSSNILQNLADITPNVTP 141
>DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory
protein 16 protein.
Length = 126
Score = 25.4 bits (53), Expect = 0.50
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 27 LVEGKPLYVGRAQKKAERQKELKRKFEQ-LKSERL 128
L+E KP + + K + Q E K+K+++ LK E L
Sbjct: 90 LIENKPNWWQELESKFDPQGEYKKKYDELLKKEGL 124
>DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory
protein 9 protein.
Length = 126
Score = 25.4 bits (53), Expect = 0.50
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 27 LVEGKPLYVGRAQKKAERQKELKRKFEQ-LKSERL 128
L+E KP + + K + Q E K+K+++ LK E L
Sbjct: 90 LIENKPNWWQELESKFDPQGEYKKKYDELLKKEGL 124
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 24.2 bits (50), Expect = 1.2
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Frame = +3
Query: 501 PAPRYYGP--AQMTQIRPTTPRWNAQPP---VRPSTQAAS 605
P+P+ P A+ + PTTP + PP + PS A+S
Sbjct: 78 PSPKRSSPILAEKVSVSPTTPPTPSPPPEERLTPSKDASS 117
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/35 (31%), Positives = 12/35 (34%)
Frame = +3
Query: 549 TTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAP 653
TTPRW +T Y P PR P
Sbjct: 51 TTPRWGCARASSATTMGGPRYGRAAAQGMPYPRFP 85
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 22.6 bits (46), Expect = 3.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 488 TIAPSSTTLLWTSSNDSNKTYNSKVECTAPCKA 586
T++PS++ +S D T K + T PC A
Sbjct: 1298 TVSPSASVPAKIASFDDTFTTTYKEDVTLPCLA 1330
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 21.8 bits (44), Expect = 6.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 462 PSGASGFFVPSLPPAPRYYGPA 527
P A FF P PR Y PA
Sbjct: 304 PEEAETFFRELEAPCPRNYNPA 325
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 21.8 bits (44), Expect = 6.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +3
Query: 462 PSGASGFFVPSLPPAPRYYGPA 527
P A FF P PR Y PA
Sbjct: 304 PEEAETFFRELEAPCPRNYNPA 325
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.4 bits (43), Expect = 8.2
Identities = 24/72 (33%), Positives = 30/72 (41%)
Frame = +3
Query: 546 PTTPRWNAQPPVRPSTQAASAYANMQPTYRPAPRAPAQSTIRTSLGARPITGQQGVAAAA 725
PT P A + P T A +AY N A A AQ + R + T G A+
Sbjct: 127 PTLPAAAAAALLPPQTAAMAAYLN-----AAAVAAAAQQSHRLMM-----TSPSGFNRAS 176
Query: 726 ASIRPPLVSQSS 761
S PL+S SS
Sbjct: 177 VS---PLISSSS 185
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,698
Number of Sequences: 336
Number of extensions: 3843
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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