Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0702
         (695 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    37   0.41 
UniRef50_Q23BZ4 Cluster: Putative uncharacterized protein; n=1; ...    34   2.9  
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ...    33   6.7  

>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 37.1 bits (82), Expect = 0.41
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +3

Query: 633 RGGARYPIRPIVSRIT 680
           RGGARYPIRPIVSRIT
Sbjct: 260 RGGARYPIRPIVSRIT 275


>UniRef50_Q23BZ4 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2189

 Score = 34.3 bits (75), Expect = 2.9
 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = +3

Query: 393 FHLT**YLFNQNIYHYYLY*AALKVSGMEYFHCSCHIKIFLIENSLVLKIEYHL-FI*KK 569
           +H+   YLFNQN Y++       ++ G  YF+ + ++   L  N+L+LK +    F    
Sbjct: 757 YHMAIPYLFNQNNYNF-------QIEG-GYFNTATYVFKVLFTNTLILKKQNQTSFAPST 808

Query: 570 ILGLVTRFCQTSLV 611
           IL  VT  C T+ +
Sbjct: 809 ILATVTNLCPTTAI 822


>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
           uncultured bacterium|Rep: Non-ribosomal peptide
           synthetase - uncultured bacterium
          Length = 338

 Score = 33.1 bits (72), Expect = 6.7
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = -3

Query: 675 YDSL*GELGTGPPLE 631
           YDSL GELGTGPPLE
Sbjct: 278 YDSLYGELGTGPPLE 292


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,521,777
Number of Sequences: 1657284
Number of extensions: 10337326
Number of successful extensions: 14591
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14584
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54958682807
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)