Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0702
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    24   1.4  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    23   1.8  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    23   1.8  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   9.6  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 651 GTGPPLESIPFSQ 613
           G G PLES+PF Q
Sbjct: 102 GLGHPLESVPFPQ 114


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 521 FN*KYFNMTGTVEIFHS 471
           F  KY+ +TGT  IFH+
Sbjct: 157 FQLKYYQVTGTPIIFHN 173


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 521 FN*KYFNMTGTVEIFHS 471
           F  KY+ +TGT  IFH+
Sbjct: 157 FQLKYYQVTGTPIIFHN 173


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 477 EYFHCSCHIK 506
           ++FHC C IK
Sbjct: 421 QFFHCYCPIK 430


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,360
Number of Sequences: 336
Number of extensions: 2743
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)